Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sesamum_20indicum_20[refseq_20GCF_5F000512975.1_202014-01-06] 16,236 sequences; 275,059,498 total letters Query= NC_023426.1 Length=245717 Score E Sequences producing significant alignments: (Bits) Value seq11 96.9 5e-15 seq5 87.8 3e-12 seq1 84.2 3e-11 >seq11 Length=15446199 Score = 96.9 bits (106), Expect = 5e-15 Identities = 146/208 (70%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || || ||||||| | || || || || ||||| | || || || | Sbjct 13442083 TGCAGATTTTTGTAAAAACCCTGACGGGCAAGACTATTACCCTGGAAGTTGAGAGCTCTG 13442142 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| ||| | ||||||||| ||||| || |||||||| |||||||| ||||||| Sbjct 13442143 ATACAATTGACAATGTAAAAGCAAAAATTCAGGACAAAGAAGGAATTCCACCAGATCAAC 13442202 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | || || ||||| || || || || || || ||| || || | | |||||||||| Sbjct 13442203 AGAGGCTGATTTTCGCTGGCAAGCAGTTGGAAGATGGAAGGACTCTGGCCGATTATAATA 13442262 Query 146212 TACAAAAAGAATCGACTATCCATTTAGT 146239 | || || || |||||| | ||||| || Sbjct 13442263 TTCAGAAGGAGTCGACTTTGCATTTGGT 13442290 Score = 89.7 bits (98), Expect = 8e-13 Identities = 143/203 (70%), Gaps = 2/203 (1%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAG-AACATAAC 146090 ||||||| || | ||||| |||| || |||||||||||| | || || | ||| | | Sbjct 13444927 TGCAAATCTTTGTGAAAACCCTAACTGGCAAAACAATTACTCTCGAAGTCGAAACCTCA- 13444985 Query 146091 GATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAA 146150 || || || | ||||| || || || || || ||||| |||||||| ||||| Sbjct 13444986 GACACCATCGACAATGTTAAGGCCAAGATCCAGGACAAGGAAGGAATTCCACCGGATCAG 13445045 Query 146151 CAAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAAT 146210 || | || ||||| || || ||||| || || ||| ||||| || | ||||| ||| Sbjct 13445046 CAGCGTCTGATTTTCGCTGGGAAACAGTTGGAGGATGGCAGAACCCTAGCCGATTACAAT 13445105 Query 146211 ATACAAAAAGAATCGACTATCCA 146233 || || || ||||| || |||| Sbjct 13445106 ATTCAGAAGGAATCCACACTCCA 13445128 Score = 87.8 bits (96), Expect = 3e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || ||| | || ||||| ||||||||||| || || | || || || | | Sbjct 13442311 TGCAGATTTTCGTGAAGACATTGACAGGAAAAACCATCACCCTGGAAGTGGAGAGTTCGG 13442370 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | || ||| | ||||| || || || || ||| |||||||| ||||| || || | Sbjct 13442371 ACACCATTGATAATGTCAAGGCAAAGATCCAGGATAAGGAAGGCATCCCACCAGACCAGC 13442430 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | ||||| || ||||| ||||| || | || ||| ||||| | | |||||||| | Sbjct 13442431 AGAGACTGATCTTTGCTGGTAAGCAGCTTGAGGATGGGAGAACTCTCGCTGATTATAACA 13442490 Query 146212 TACAAAAAGAATCGACTATCCAT 146234 | || || || |||||| | ||| Sbjct 13442491 TTCAGAAGGAGTCGACTCTTCAT 13442513 Score = 86.0 bits (94), Expect = 1e-11 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| || | || || || || ||||||||||| ||| | || || || | | Sbjct 11225974 TGCAAATTTTTGTTAAGACCTTGACTGGAAAAACAATCACTCTGGAGGTGGAGAGTTCAG 11226033 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| ||| | ||||| || || || ||| || || || |||||||| ||||||| Sbjct 11226034 ATACAATTGATAATGTGAAGGCAAAGATTCAAGACAAGGAGGGGATTCCACCAGATCAAC 11226093 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || | ||||| ||||| || || || | || ||| | || | | |||||||||| Sbjct 11226094 AACGGCTCATCTTTGCTGGGAAGCAGCTTGAGGATGGCCGTACACTTGCCGATTATAATA 11226153 Query 146212 TACAAAAAGAATCGACT 146228 | || ||||| || ||| Sbjct 11226154 TCCAGAAAGAGTCAACT 11226170 >seq5 Length=18898134 Score = 87.8 bits (96), Expect = 3e-12 Identities = 155/226 (69%), Gaps = 0/226 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || || | ||||| || || || || || ||||| | || || || | | Sbjct 2599102 TGCAGATTTTTGTCAAAACCTTGACTGGGAAGACCATTACATTAGAGGTTGAGAGTTCAG 2599043 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | || || | ||||| || || || || ||| ||||||||||| || || |||| Sbjct 2599042 ACACAATCGACAATGTCAAGGCCAAGATTCAGGATAAGGAAGGCATTCCTCCAGACCAAC 2598983 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | || | || ||||| ||||| || | || ||| || || | | |||||||||| Sbjct 2598982 AGCGATTGATCTTTGCTGGTAAGCAGCTTGAAGATGGCAGGACTCTTGCTGATTATAATA 2598923 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGG 146257 | |||||||| || ||| | ||| |||| || ||||| ||||| || Sbjct 2598922 TTCAAAAAGAGTCTACTCTTCATCTAGTTTTGCGATTGAGAGGTGG 2598877 >seq1 Length=18577331 Score = 84.2 bits (92), Expect = 3e-11 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 146127 AAAGAAGGCATTCCACCCGATCAACAAAGACTCATTTTTGCAGGTAAACAATTAGATGAT 146186 |||||||| || || || || || || || ||||||||||| |||||||| || || ||| Sbjct 937481 AAAGAAGGTATACCTCCTGACCAGCAGAGGCTCATTTTTGCTGGTAAACAGTTGGAAGAT 937540 Query 146187 AATAGAACGTTAACAGATTATAATATACAAAAAGAATCGAC 146227 ||||| | ||||||| ||||| ||||||||||| || Sbjct 937541 GGCAGAACCCTTGCAGATTACAATATTCAAAAAGAATCAAC 937581 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 786006847529120