Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sesamum_20indicum_20[refseq_20GCF_5F000512975.1_202014-01-06] 16,236 sequences; 275,059,498 total letters Query= NC_023549.1 Length=56789 Score E Sequences producing significant alignments: (Bits) Value seq16236 93.3 2e-14 seq9 93.3 2e-14 seq3 93.3 2e-14 >seq16236 Length=153324 Score = 93.3 bits (102), Expect = 2e-14 Identities = 65/74 (88%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 50110 GTTGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAA 50169 ||||||||| | ||||||||||||| | |||| ||| ||||||||| |||||||||| || Sbjct 37200 GTTGCGGAGACAGGATTTGAACCCGTGACCTCAAGGTTATGAGCCTTGCGAGCTACCAAA 37259 Query 50170 CTGCTCTACTCCGC 50183 ||||||||| |||| Sbjct 37260 CTGCTCTACCCCGC 37273 >seq9 Length=12411895 Score = 93.3 bits (102), Expect = 2e-14 Identities = 65/74 (88%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 50110 GTTGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAA 50169 ||||||||| | ||||||||||||| | |||| ||| ||||||||| |||||||||| || Sbjct 8949971 GTTGCGGAGACAGGATTTGAACCCGTGACCTCAAGGTTATGAGCCTTGCGAGCTACCAAA 8950030 Query 50170 CTGCTCTACTCCGC 50183 ||||||||| |||| Sbjct 8950031 CTGCTCTACCCCGC 8950044 >seq3 Length=24928530 Score = 93.3 bits (102), Expect = 2e-14 Identities = 65/74 (88%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 50110 GTTGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAA 50169 ||||||||| | ||||||||||||| | |||| ||| ||||||||| |||||||||| || Sbjct 17022712 GTTGCGGAGACAGGATTTGAACCCGTGACCTCAAGGTTATGAGCCTTGCGAGCTACCAAA 17022653 Query 50170 CTGCTCTACTCCGC 50183 ||||||||| |||| Sbjct 17022652 CTGCTCTACCCCGC 17022639 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 181568186449032