Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sesamum_20indicum_20[refseq_20GCF_5F000512975.1_202014-01-06] 16,236 sequences; 275,059,498 total letters Query= NC_023681.1 Length=152710 Score E Sequences producing significant alignments: (Bits) Value seq11 96.9 3e-15 seq8 86.0 6e-12 seq6 86.0 6e-12 seq5 82.4 7e-11 seq1 82.4 7e-11 >seq11 Length=15446199 Score = 96.9 bits (106), Expect = 3e-15 Identities = 152/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 137194 AAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTC 137253 || |||| || | ||||| || |||||||| || || |||||||| || || || Sbjct 11225734 AACCGCAGCACAAGATGAAGGGTTGATTCTTTCTGGATATTGTAATCTGCCAGCGTCCTT 11225675 Query 137254 GAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCT 137313 ||||| ||||||||||| ||| |||||| | ||||| || ||||| || |||||| Sbjct 11225674 CCATCTTCAAGTTGTTTACCGGCAAAGATCAATCTCTGCTGGTCAGGAGGGATTCCTTCT 11225615 Query 137314 TTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTC 137373 ||||| |||||| || | | || | || |||| ||| ||||| | ||| Sbjct 11225614 TTGTCCTGGATTTTTGCCTTAACATTGTCAATTGTATCTGAACTTTCAACTTCCAGAGTA 11225555 Query 137374 ACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 137411 | |||||| || || | || ||||| || || ||||| Sbjct 11225554 ATCGTCTTACCAGTAAGAGTCTTTACAAAAATCTGCAT 11225517 Score = 95.1 bits (104), Expect = 1e-14 Identities = 150/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 137197 CGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAG 137256 |||| || ||||||| || ||||| ||||| || ||||| ||| | || || Sbjct 13442068 CGCAGCACCAAATGAAGAGTCGATTCCTTTTGAATATTGTAGTCGGCTAGAGTTCTACCA 13442009 Query 137257 TCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 137316 || || |||||||| || || |||||| | |||||||||||| ||||| ||||| ||| Sbjct 13442008 TCCTCCAGTTGTTTTCCGGCGAAGATCAACCTTTGCTGATCGGGCGGTATCCCTTCCTTG 13441949 Query 137317 TCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACC 137376 || |||||| || | | || | ||||||| | || || || | || | Sbjct 13441948 TCCTGAATTTTAGCCTTGACGTTGTCTATGGTGTCTGAGCTCTCCACCTCGAGGGTGATT 13441889 Query 137377 GTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 137411 || |||||||||| |||||||| || || ||||| Sbjct 13441888 GTTTTGCCGGTCAGAGTTTTTACAAAGATCTGCAT 13441854 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244 ||||| | || ||||| || | ||| | || || || ||||| |||||||| || Sbjct 13253395 CCTCCCCTCAAGCGCAAGACCAGATGGAGAGTTGACTCCTTTTGGATGTTGTAGTCTGCA 13253454 Query 137245 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 137304 | ||| || || || || |||||||||||| |||||| |||||||| || ||||| Sbjct 13253455 AGTGTCCTACCATCCTCAAGCTGTTTACCAGCAAAGATCAATCGTTGCTGGTCTGGAGGA 13253514 Query 137305 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACT 137364 || ||||||||||| ||||||| || | | || | || || | || || Sbjct 13253515 ATACCTTCTTTGTCCTGAATTTTTGCCTTGACGTTGTCTATTGTATCCGAACTCTCAACC 13253574 Query 137365 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 137411 || | ||| | ||||| || ||||| || || || || || ||||| Sbjct 13253575 TCCAAAGTAATGGTCTTCCCAGTCAAGGTCTTGACAAAGATCTGCAT 13253621 >seq8 Length=21523998 Score = 86.0 bits (94), Expect = 6e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 137220 TTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATA 137279 |||||| ||||||||||| ||| || |||| |||||| || || || || || | Sbjct 16226394 TTCTTTCTGTATGTTGTAGTCGGACAAAGTGCGTTCGTCTTCCAGCTGCTTGCCGGCGAA 16226335 Query 137280 GATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTG 137339 ||||| ||||| || || ||||| | |||||||| || |||||| || | | Sbjct 16226334 TATCAGTCGTTGTTGGTCCGGAGGAACCCCTTCTTTTTCTTGAATTTTGGACTTCACATT 16226275 Query 137340 TTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTAC 137399 ||| || ||||| || || || || | ||| | || || |||||||| || || || Sbjct 16226274 TTCTACAGTGTCCGTACTCTCCACATCCAGAGTTATGGTTTTTCCGGTCAAGGTCTTAAC 16226215 Query 137400 GAATATTTGCAT 137411 ||| || ||||| Sbjct 16226214 GAAGATCTGCAT 16226203 >seq6 Length=25289714 Score = 86.0 bits (94), Expect = 6e-12 Identities = 85/110 (77%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 137209 TGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGT 137268 |||| ||| ||||||||||| || |||||||| || || || ||||| | ||| Sbjct 18207737 TGAAGTGTGGATTCTTTTTGGATATTGTAATCCGCCAGGGTTCTGCCATCTTCCAACTGT 18207796 Query 137269 TTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTC 137318 ||||||||| | || || | ||||| || |||||||||||||||||||| Sbjct 18207797 TTACCAGCAAATATTAGCCTCTGCTGGTCTGGAGGTATGCCTTCTTTGTC 18207846 >seq5 Length=18898134 Score = 82.4 bits (90), Expect = 7e-11 Identities = 149/218 (68%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 137194 AAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTC 137253 || |||| || | ||| | || ||||| || || || |||||||| || || || Sbjct 2599114 AATCGCAGCACAAGATGGAGGGTCGATTCCTTCTGAATATTGTAATCTGCCAAGGTCCTT 2599173 Query 137254 GAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCT 137313 || || |||||||| |||||| |||||| | ||||| || ||||| || || || Sbjct 2599174 CCATCCTCAAGTTGTTTGCCAGCAAAGATCAATCTCTGCTGGTCTGGAGGAATCCCCTCC 2599233 Query 137314 TTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTC 137373 ||||| ||||||| ||| | | || | ||||||| | ||| ||||| | || Sbjct 2599234 TTGTCCTGAATTTTTGCTTTGACATTGTCAATTGTGTCTGAGCTTTCAACTTCCAGGGTA 2599293 Query 137374 ACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 137411 | || || || || | || || || ||||||||||| Sbjct 2599294 ATAGTTTTACCAGTAAGAGTCTTCACAAATATTTGCAT 2599331 >seq1 Length=18577331 Score = 82.4 bits (90), Expect = 7e-11 Identities = 90/120 (75%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 137199 CAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTC 137258 |||||| | |||| ||| ||||||||||| || |||||||| | || || || Sbjct 937597 CAAAACAAGGTGAAGTGTTGATTCTTTTTGAATATTGTAATCTGCAAGGGTTCTGCCATC 937538 Query 137259 TTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTC 137318 ||| | |||||||||||| | || || | ||||| || |||||||| ||||||||||| Sbjct 937537 TTCCAACTGTTTACCAGCAAAAATGAGCCTCTGCTGGTCAGGAGGTATACCTTCTTTGTC 937478 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 488444849995200