Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sesamum_20indicum_20[refseq_20GCF_5F000512975.1_202014-01-06] 16,236 sequences; 275,059,498 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq15 111 4e-19 seq13 109 1e-18 >seq15 Length=10047770 Score = 111 bits (122), Expect = 4e-19 Identities = 277/413 (67%), Gaps = 12/413 (3%) Strand=Plus/Minus Query 131870 TTTGCTTGTGTTGAAGGTATATTCTTTTCAGGTGCTTTCTGTGCTATCTTTTGGCTTAAG 131929 ||||||||||| ||||| ||||| || || || |||||||| || |||||||| ||| Sbjct 1769445 TTTGCTTGTGTGGAAGGCATATTTTTCTCGGGAAGCTTCTGTGCAATATTTTGGCTGAAG 1769386 Query 131930 AAGCGTGGATTGATGCCTGGACTCTCATTGTCCAATCAATTCATCTCGAGAGATGAAGCA 131989 |||||||| |||||||| || | | || ||||| |||| ||||| | ||||| | Sbjct 1769385 AAGCGTGGTTTGATGCCGGGTTTAACTTTCTCCAACGAATTAATCTCACGGGATGAGGGT 1769326 Query 131990 TTGCATACTGAATTTGCTATATTAATCTATAGAAAATTTGCTG---ATAAACTTGA-TGA 132045 ||||| || ||||| || | ||||| |||| || || || |||| || Sbjct 1769325 TTGCACTGCGATTTTGCGTGCTTGCTTTATAG----TTTGTTGAAAATGAAGTTGAGCGA 1769270 Query 132046 AAATAATATTAAACAACTTATAAGC-GAAGCAGTTGATATCGAGAAGGAGTTTATTACAG 132104 | || | | || || || || || || || || || | ||||||| | | Sbjct 1769269 GGAGAA-AGTGAAGGCGATAGTGGCGGACGCGGTGGACATTGAAAGGGAGTTTGTGTGCG 1769211 Query 132105 AAGCTTTGCCTTGCAATTTGATTGGGATGAATGCTGACTCTATGAAGGAGTACATTGAAT 132164 | || |||||||| ||| | |||||||||| || | |||| |||||||| | | Sbjct 1769210 ATGCGCTGCCTTGCGCGTTGGTGGGGATGAATGGAGAATTGATGAGTCAGTACATTAAGT 1769151 Query 132165 TCGTTGCTGATCGTTTAATTAACCAACTTGGATATTCCAAGATTTATAACACCCAAAACC 132224 | || |||||| | || | || | | || ||| ||| | ||| | |||||||| Sbjct 1769150 TTGTGGCTGATAGATTGCTGAATGCATTGGGGTATGGGAAGTTGTATTATGTCCAAAACC 1769091 Query 132225 CCTATACATGGATGGAGTCAATTTCGCTTG-AAGGTAAAACGAACTTCTTCGA 132276 | | | |||||||||| || | | ||| |||| || || || ||||| || Sbjct 1769090 CGTTTGATTGGATGGAGTTAA-TAAGTTTGCAAGGGAAGACTAATTTCTTTGA 1769039 >seq13 Length=5050363 Score = 109 bits (120), Expect = 1e-18 Identities = 215/316 (68%), Gaps = 8/316 (3%) Strand=Plus/Plus Query 131864 GTAGCTTTTGCTTGTGTTGAAGGTATATTCTTTTCAGGTGCTTTCTGTGCTATCTTTTGG 131923 || || |||||||||||||| || ||||| || || || ||||| || || |||||| Sbjct 3176074 GTCGCCTTTGCTTGTGTTGAGGGGATATTTTTCTCGGGGAGCTTCTGCGCCATATTTTGG 3176133 Query 131924 CTTAAGAAGCGTGGATTGATGCCTGGACTCTCATTGTCCAATCAATTCATCTCGAGAGAT 131983 | || ||||| || ||||||| || | | || |||||| |||| || ||| ||||| Sbjct 3176134 TTGAAAAAGCGCGGGATGATGCCGGGCTTGACTTTCTCCAATGAATTAATTTCGCGAGAT 3176193 Query 131984 GAAGCATTGCATACTGAATTTGCTATATTAATCTATAGAAAATTTGCTG---ATAAACTT 132040 |||| |||||| ||| ||||| | | || || |||| || || || | Sbjct 3176194 GAAGGTTTGCATTGTGATTTTGCGTGCCTGCTTTACAG----TTTGTTGAAAATGAAGCT 3176249 Query 132041 GA-TGAAAATAATATTAAACAACTTATAAGCGAAGCAGTTGATATCGAGAAGGAGTTTAT 132099 || ||| | || | ||| | | | || ||||| |||| |||| ||||||| | Sbjct 3176250 GAGTGAGGAGAAAGTGAAAGGAATAGTGGCGGACGCAGTGAATATAGAGAGGGAGTTTGT 3176309 Query 132100 TACAGAAGCTTTGCCTTGCAATTTGATTGGGATGAATGCTGACTCTATGAAGGAGTACAT 132159 || || |||||||| || | |||||||||| || | |||| ||||||| Sbjct 3176310 GTGTGATGCGCTGCCTTGCGCGCTGGTGGGGATGAATGGAGATTTGATGAGCCAGTACAT 3176369 Query 132160 TGAATTCGTTGCTGAT 132175 |||||| || |||||| Sbjct 3176370 TGAATTTGTGGCTGAT 3176385 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186565914750796