Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sesamum_20indicum_20[refseq_20GCF_5F000512975.1_202014-01-06] 16,236 sequences; 275,059,498 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq11 105 4e-18 seq8 104 2e-17 seq14 98.7 7e-16 seq6 86.0 4e-12 >seq11 Length=15446199 Score = 105 bits (116), Expect = 4e-18 Identities = 154/214 (72%), Gaps = 8/214 (4%) Strand=Plus/Minus Query 33540 CACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTC 33599 ||||||||| ||||| || ||||| || ||||| |||| || || | | || || Sbjct 13442063 CACCAAATGAAGAGTCGATTCCTTTTGAATATTGTAGTCGGCTAGAGTTCTACCATCCTC 13442004 Query 33600 CAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGC 33659 || |||||||||||| || ||||| | |||||||| |||| | ||||| ||||| Sbjct 13442003 CAGTTGTTTTCCGGCGAAGATCAACCTTTGCTGATCGGGCGGTATCCCTTCCTTGTCCTG 13441944 Query 33660 AATTTTCTGTTTCAACATAGTC-ACGGTGTC---GCTTGATTCCACGTCAACCGTGATCG 33715 |||||| | | || | ||| | |||||| ||| ||||| || | ||||| | Sbjct 13441943 AATTTT-AGCCTTGACGTTGTCTATGGTGTCTGAGCT---CTCCACCTCGAGGGTGATTG 13441888 Query 33716 TTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 |||| || || | |||||||||||||||||||| Sbjct 13441887 TTTTGCCGGTCAGAGTTTTTACAAAGATCTGCAT 13441854 Score = 98.7 bits (108), Expect = 7e-16 Identities = 168/240 (70%), Gaps = 4/240 (2%) Strand=Plus/Plus Query 33513 AAAATCGTCA--CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATG 33570 |||||| || || || |||||||| | ||||||||| || || ||||| || ||| Sbjct 13254067 AAAATCTGCATGCCTCCCCTCAAACGCAGCACCAAATGCAGGGTCGATTCTTTCTGGATG 13254126 Query 33571 TTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGC 33630 |||||||| | || || | | || || | ||| || |||||||| ||||| | |||| Sbjct 13254127 TTGTAATCTGCAAGGGTCCTGCCATCCTCAAGTTGCTTCCCGGCAAAGATCAATCTCTGC 13254186 Query 33631 TGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTC 33689 || ||| | || | ||||| ||||| ||||||| | | |||| || | || || Sbjct 13254187 TGGTCTGGAGGAATCCCTTCCTTGTCCTGAATTTTC-GCCTTGACATTATCAATCGTATC 13254245 Query 33690 GCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | |||||| || | || || || || ||||| | || || |||||||||||||| Sbjct 13254246 GGAGCTTTCCACTTCCAGGGTTATAGTCTTCCCTGTGAGGGTCTTGACAAAGATCTGCAT 13254305 Score = 96.9 bits (106), Expect = 2e-15 Identities = 161/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||| ||||| || | ||| | ||| || || ||||| || || |||||||| | Sbjct 11225743 CCACCCCTCAACCGCAGCACAAGATGAAGGGTTGATTCTTTCTGGATATTGTAATCTGCC 11225684 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || || | | | || || | |||||| |||||||| ||||| | |||||| || | || Sbjct 11225683 AGCGTCCTTCCATCTTCAAGTTGTTTACCGGCAAAGATCAATCTCTGCTGGTCAGGAGGG 11225624 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCACGGTGTCGCTTGA--TTCCA 33700 | ||||||||||| ||||| || | ||||| |||| ||| || | ||| | Sbjct 11225623 ATTCCTTCTTTGTCCTGGATTTT-TGCCTTAACATTGTCA-ATTGTATCTGAACTTTCAA 11225566 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || | || ||||| ||||| || | || |||||||| |||||||| Sbjct 11225565 CTTCCAGAGTAATCGTCTTACCAGTAAGAGTCTTTACAAAAATCTGCAT 11225517 Score = 89.7 bits (98), Expect = 3e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 || || ||||| || || |||| ||| ||||| ||| ||||| |||||||| || | Sbjct 13253395 CCTCCCCTCAAGCGCAAGACCAGATGGAGAGTTGACTCCTTTTGGATGTTGTAGTCTGCA 13253454 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 ||||| | | || || | ||||| || ||||| ||||| || ||||| ||| | || Sbjct 13253455 AGTGTCCTACCATCCTCAAGCTGTTTACCAGCAAAGATCAATCGTTGCTGGTCTGGAGGA 13253514 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | |||||||||||| |||||| || | || | ||| | || || || || Sbjct 13253515 ATACCTTCTTTGTCCTGAATTTT-TGCCTTGACGTTGTCTATTGTATCCGAACTCTCAAC 13253573 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || | || || || || || || || || || |||||||||||||| Sbjct 13253574 CTCCAAAGTAATGGTCTTCCCAGTCAAGGTCTTGACAAAGATCTGCAT 13253621 Score = 87.8 bits (96), Expect = 1e-12 Identities = 136/192 (71%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 33559 TCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAA 33618 || || || || |||||||||| || || | | || ||||| ||||| || || ||| Sbjct 13445116 TCCTTCTGAATATTGTAATCGGCTAGGGTTCTGCCATCCTCCAACTGTTTCCCAGCGAAA 13445057 Query 33619 ATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATA 33678 |||| |||||||||||| | || | ||||| ||||| || || | | ||||| Sbjct 13445056 ATCAGACGCTGCTGATCCGGTGGAATTCCTTCCTTGTCCTGGATCTT-GGCCTTAACATT 13444998 Query 33679 GTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTAC 33737 ||| | |||||| | ||| || || | || || ||||| || |||| ||||| || Sbjct 13444997 GTCGATGGTGTCTGAGGTTTCGACTTCGAGAGTAATTGTTTTGCCAGTTAGGGTTTTCAC 13444938 Query 33738 AAAGATCTGCAT 33749 |||||| ||||| Sbjct 13444937 AAAGATTTGCAT 13444926 >seq8 Length=21523998 Score = 104 bits (114), Expect = 2e-17 Identities = 147/204 (72%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 33547 TGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGT 33606 || || ||||| ||||| ||||||||||| ||||| | ||||||||||| |||| || Sbjct 16226405 TGGAGGGTGCTTTCTTTCTGTATGTTGTAGTCGGACAAAGTGCGTTCGTCTTCCAGCTGC 16226346 Query 33607 TTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTC 33666 || ||||| || |||| || || || || | || || |||||||| || |||||| Sbjct 16226345 TTGCCGGCGAATATCAGTCGTTGTTGGTCCGGAGGAACCCCTTCTTTTTCTTGAATTTTG 16226286 Query 33667 TGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGT 33725 ||| |||| || || ||||| | ||||| || | || || ||||| || || Sbjct 16226285 GACTTC-ACATTTTCTACAGTGTCCGTACTCTCCACATCCAGAGTTATGGTTTTTCCGGT 16226227 Query 33726 TAACGTTTTTACAAAGATCTGCAT 33749 || || || || ||||||||||| Sbjct 16226226 CAAGGTCTTAACGAAGATCTGCAT 16226203 >seq14 Length=4882680 Score = 98.7 bits (108), Expect = 7e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||| | | ||| || ||||| || || || ||| || || |||||||| |||| | Sbjct 1411649 CCACCACGGAGACGCAAGACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCGGCG 1411708 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || |||||| |||| || | || |||||||| || || || | |||||| || | || Sbjct 1411709 AGGGTGCGTCCGTCTTCAAGCTGCTTTCCGGCGAAGATTAACCTCTGCTGGTCCGGGGGA 1411768 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | ||||| ||||| || || || ||| | ||| | |||||| |||||| Sbjct 1411769 ATTCCTTCCTTGTCCTGGATCTTGGCCTT-AACGTTGTCGATGGTGTCCGAACTTTCCAC 1411827 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 |||| ||||| || || ||||| | ||||| || ||||||||||| Sbjct 1411828 CTCAAGGGTGATGGTCTTGCCTGTAAGAGTTTTCACGAAGATCTGCAT 1411875 >seq6 Length=25289714 Score = 86.0 bits (94), Expect = 4e-12 Identities = 143/204 (70%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 33547 TGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGT 33606 || ||||| ||| || || |||||||| |||| ||| ||||| |||| || | || Sbjct 179472 TGGAGAGTTGACTCCTTCTGAATGTTGTAGTCGGCGAGAGTGCGGCCGTCCTCGAGCTGC 179413 Query 33607 TTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTC 33666 |||||||| || || | |||||||| || | || | ||||| ||||| || || Sbjct 179412 TTTCCGGCGAAGATGAGGCGCTGCTGGTCCGGAGGGATGCCTTCCTTGTCCTGGATCTTG 179353 Query 33667 TGTTTCAACATAGTCAC-GGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGT 33725 || | | | |||| ||| ||| ||||| || |||| || || || ||||| || Sbjct 179352 GCCTTGA-CGTTGTCAATGGTATCGGAGGATTCGACCTCAAGGGTAATGGTCTTACCCGT 179294 Query 33726 TAACGTTTTTACAAAGATCTGCAT 33749 || ||||| || ||||||||||| Sbjct 179293 TAGGGTTTTGACGAAGATCTGCAT 179270 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328638957285120