Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sesamum_20indicum_20[refseq_20GCF_5F000512975.1_202014-01-06] 16,236 sequences; 275,059,498 total letters Query= NC_025461.1 Length=45871 Score E Sequences producing significant alignments: (Bits) Value seq16236 585 8e-163 seq8 298 2e-76 seq6 150 5e-32 seq2 132 1e-26 >seq16236 Length=153324 Score = 585 bits (648), Expect = 8e-163 Identities = 724/983 (74%), Gaps = 8/983 (1%) Strand=Plus/Minus Query 28638 TAACTGGGTCACTTCGACCAACAACCGTCTTTATGTTGGGTGGTTTGGAACACTGATGAT 28697 ||||||| | || ||| | ||||||||||| |||| |||||||| ||||||| Sbjct 1388 TAACTGGATAACCAGCACCGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGAT 1329 Query 28698 TCCGTGTCTCCTTGCAGCCACCATCTGC-TTCATTATTGCATTCATTGCGGCACCACCAG 28756 || | || ||| || | |||| || |||||||| |||||||| || || |||| Sbjct 1328 CCC-TACCTTATTGACCGCAACTTCTGTATTTATTATTGCCTTCATTGCTGCCCCTCCAG 1270 Query 28757 TTGACATTGATGGCATCCGCGAACCTGTCGCTGGAAGTCTTCTCTATGGAAACAACATCA 28816 | || |||||||| || || |||||||| ||||| | | || || |||||||| || | Sbjct 1269 TAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTTTACTTTACGGAAACAATATTA 1210 Query 28817 TATCGGGAGCCGTCGTACCGAG--CAGCAATGCCATCGGACTACACTTCTACCCAATTTG 28874 | || || ||| | | || | | ||| || ||||| | ||||| ||||||||||| Sbjct 1209 TCTCAGGTGCCATTATTCCTACTTCTGCA--GCTATCGGTTTGCACTTTTACCCAATTTG 1152 Query 28875 GGAAGCTAATTCACTTGATGAATGGCTCTACAACGGGGGACCGTTCCAACTTGTGGTCTT 28934 |||||| || ||||||||||| | |||||||| || || | |||| | || | Sbjct 1151 GGAAGCAGCATCCGTTGATGAATGGTTATACAACGGTGGTCCTTATGAACTAATTGTTCT 1092 Query 28935 CCACTTCCTCATTGGCGTCTATGCTTACATGGGACGCGAGTGGGAACTTAGCTATCGACT 28994 |||||| | |||| || | ||||||||| || |||||||||||||| | || || Sbjct 1091 ACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTCCGTCT 1032 Query 28995 AGGAATGAGGCCGTGGATTTGTGTCGCATACTCAGCTCCCGTCGCAGCGGCATCTGCGGT 29054 || ||| | || |||||| ||| ||||| |||||||| || ||||| || | || || Sbjct 1031 GGGTATGCGACCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACCGCTGT 972 Query 29055 TTTCCTCGTCTACCCATTCGGTCAAGGTTCTTTTAGCGACGCGATGCCTTTGGGTATTTC 29114 |||| | |||||||| |||||||||| |||| || | |||||| | || ||||| Sbjct 971 TTTCTTGATCTACCCAATCGGTCAAGGAAGTTTTTCTGATGGTATGCCTCTAGGAATTTC 912 Query 29115 AGGCACCTTCAACTACATGCTGGTGTTCCAAGCCGAACATAACATTCTCATGCACCCGTT 29174 || || ||||||| |||| | || ||||| || || || ||||| || |||||||| || Sbjct 911 TGGTACTTTCAACTTCATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATT 852 Query 29175 CCACATGCTGGGCGTTGCTGGAGTGTTCGGTGGCTCGCTATTTAGTGCAATGCACGGTTC 29234 |||||| | ||||| ||||| || ||||| ||||| ||||| ||||| ||||| ||||| Sbjct 851 TCACATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTC 792 Query 29235 GCTTGTCACGTCCTCGCTTGTGC-GTGAGACGACTGAAGACATCTCTCAGAACTATGGTT 29293 | || || || | | ||| | | || || || ||| | ||| || | |||| Sbjct 791 CTTGGTAACTTC-TAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGTT 733 Query 29294 ACAAGTTTGGACAAGAAGAAGAGACTTATAACATCGTAGCCGCTCACGGTTACTTTGGAC 29353 ||| || || ||||| ||||| |||||||| |||||||||||||| ||||| ||||| | Sbjct 732 ACAGATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCCGCTCATGGTTATTTTGGCC 673 Query 29354 GTTTGATCTTCCAATATGCTTCTTTCAATAATAGCCGTTCTCTACACTTCTTCCTTGCTG 29413 | |||||||||||||||||| |||||| || ||||| ||||||||||||| |||| Sbjct 672 GATTGATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCGTTACACTTCTTCCTAGCTG 613 Query 29414 CCTGGCCGGTGGTAGGGATTTGGTTCGCTGCCTTGGGCGTTTCTACAATGGCGTTTAATC 29473 | ||||| || || || || |||||| |||| || || | || ||||| || || | Sbjct 612 CTTGGCCTGTAGTGGGTATCTGGTTCACTGCTTTAGGTATCAGCACTATGGCTTTCAACC 553 Query 29474 TGAACGGTTTTAACTTTAACCAGTCGCTTCTCGACAACAATGGTCGTGTCATTAATACTT 29533 | |||||||| || || ||||| || | | || | | || ||||| |||||||||| Sbjct 552 TAAACGGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGCCGTGTAATTAATACTT 493 Query 29534 GGGCTGATGTTCTCAATCGCGCTAACCTCGGCTTTGAAGTAATGCATGAGCGTAATGCTC 29593 |||||||| | |||| || |||||||| || | ||||| |||||||| |||||||||| Sbjct 492 GGGCTGATATCATCAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTC 433 Query 29594 ATAACTTCCCACTTGATCTGGCT 29616 |||||||||| || || || ||| Sbjct 432 ATAACTTCCCTCTAGACCTAGCT 410 >seq8 Length=21523998 Score = 298 bits (330), Expect = 2e-76 Identities = 435/610 (71%), Gaps = 10/610 (2%) Strand=Plus/Plus Query 29008 TGGATTTGTGTCGCATACTCAGCTCCCGTCGCAGCGGCATCTGCGGTTTTCCTCGTCTAC 29067 ||| || ||| ||||| ||||||| || ||||| || | | ||||| | ||||| Sbjct 7119338 TGGGTTCCTGTTGCATATTCAGCTCGTGTTGCAGCTGCTACCACTATTTTCTTGATCTAC 7119397 Query 29068 CCATTCGGTCAAGGTTCTTTTAGCGACGCGATGCCTTTGGGTATTTCAGGCACCTTCAAC 29127 ||| ||| |||||| |||| || | |||||| | || ||||| || || |||||| Sbjct 7119398 CCAATCGATCAAGGAAGTTTTTCTGATGGTATGCCTCTAGGAATTTCTGGTACTTTCAAC 7119457 Query 29128 TACATGCTGGTGTTCCAAGCCGAACATAACATTCTCATGCACCCGTTCCACATGCTGGGC 29187 | |||| | || ||||| || || || |||| || |||||||| || |||||| | || Sbjct 7119458 TTCATGATTGTATTCCAGGCTGAGCACAACAACCTTATGCACCCATTTCACATGTTAGGT 7119517 Query 29188 GTTGCTGGAGTGTTCGGTGGCTCGCTATTTAGTGCAATGCACGGTTCGCTTGTCACGTCC 29247 || ||||| || ||||| || || ||||| ||||| ||||| ||||| | || || || Sbjct 7119518 GTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACTTC- 7119576 Query 29248 TCGCTTGTGC-GTGAGACGACTGAAGACATCTCTCAGAACTATGGTTACAAGTTTGGACA 29306 | | ||| | | || || || ||| | ||| || | ||| ||| ||| | || Sbjct 7119577 TAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAAAGAAGGTCACAGGTTCAGTCA 7119636 Query 29307 AGAAGAAGAGACTTATAACATCGTAGCCGCTCACGGTTACTTTGGACGTTTGATCTTCCA 29366 |||| |||||||| ||| |||| ||||| ||||| ||||| || ||||||||||| Sbjct 7119637 AGAA------ACTTATAATATCATAGCAGCTCATGGTTATTTTGGCCGATTGATCTTCCA 7119690 Query 29367 ATATGCTTCTTTCAATAATAGCCGTTCTCTACACTTCTTCCTTGCTGCCTGGCCGGTGGT 29426 ||| || |||||| | || | | ||||||||||||| ||||||||||| | || Sbjct 7119691 -TATACTAGTTTCAACAGCTCCCATCAT-TACACTTCTTCCTAGCTGCCTGGCCTATAGT 7119748 Query 29427 AGGGATTTGGTTCGCTGCCTTGGGCGTTTCTACAATGGCGTTTAATCTGAACGGTTTTAA 29486 | || || ||| || | || || | || ||||| || || || |||||||| || Sbjct 7119749 TCGTATCTGCTTCACTCCTTTAGGTATCAGCACTATGGCTTTCAACCTAAACGGTTTCAA 7119808 Query 29487 CTTTAACCAGTCGCTTCTCGACAACAATGGTCGTGTCATTAATACTTGGGCTGATGTTCT 29546 || ||||| || | | || | | | || |||| |||||||| |||| |||| | | Sbjct 7119809 TTTCAACCAATCTGTAGTTGATAGCCAAGGCTGTGTAATTAATACCTGGGTTGATATGAT 7119868 Query 29547 CAATCGCGCTAACCTCGGCTTTGAAGTAATGCATGAGCGTAATGCTCATAACTTCCCACT 29606 ||| || |||||||| || | ||||| |||| ||| |||||||||||||||||||| || Sbjct 7119869 CAACCGTGCTAACCTTGGTATGGAAGTTATGCGTGAACGTAATGCTCATAACTTCCCTCT 7119928 Query 29607 TGATCTGGCT 29616 || || ||| Sbjct 7119929 AGACCTAGCT 7119938 >seq6 Length=25289714 Score = 150 bits (166), Expect = 5e-32 Identities = 181/246 (74%), Gaps = 0/246 (0%) Strand=Plus/Plus Query 28936 CACTTCCTCATTGGCGTCTATGCTTACATGGGACGCGAGTGGGAACTTAGCTATCGACTA 28995 |||||| | | ||| || | ||||||||| || |||||||||||||| | || || Sbjct 6246886 CACTTCTTAAATGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTG 6246945 Query 28996 GGAATGAGGCCGTGGATTTGTGTCGCATACTCAGCTCCCGTCGCAGCGGCATCTGCGGTT 29055 || ||| | | |||||| ||| ||||| || |||| || ||||| || | || ||| Sbjct 6246946 GGTATGCGACATTGGATTGCTGTTGCATATCCAACTCCTGTTGCAGCTGCTACCGCTGTT 6247005 Query 29056 TTCCTCGTCTACCCATTCGGTCAAGGTTCTTTTAGCGACGCGATGCCTTTGGGTATTTCA 29115 ||| | |||||||| |||||||||| |||| || | |||||| | || ||||| Sbjct 6247006 TTCTTGATCTACCCAATCGGTCAAGGAAGTTTTTCTGATGGTATGCCTCTAGGAATTTCT 6247065 Query 29116 GGCACCTTCAACTACATGCTGGTGTTCCAAGCCGAACATAACATTCTCATGCACCCGTTC 29175 || || ||||||| |||| | || ||||| || || || ||||| || |||||||| || Sbjct 6247066 GGTACTTTCAACTTCATGATTGTATTCCAGGCTGAGCAGAACATCCTTATGCACCCATTT 6247125 Query 29176 CACATG 29181 |||||| Sbjct 6247126 CACATG 6247131 >seq2 Length=18500646 Score = 132 bits (146), Expect = 1e-26 Identities = 156/208 (75%), Gaps = 5/208 (2%) Strand=Plus/Minus Query 29290 GGTTACAAGTTTGGACAAGAAGAAGAGACTTATAACATCGTAGCCGCTCACGGTTACTTT 29349 |||||||| || || ||||| ||||| |||||||| |||||||| ||||| ||||| ||| Sbjct 3034145 GGTTACAAATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGC-GCTCATGGTTATTTT 3034087 Query 29350 GGACGTTTGATCTTCCAATATGCTTCTTTCAATAATAGCCGTTCTCTACACTTCTTCCTT 29409 || || |||||||||||||||||| |||||| || | | ||||||||||||| Sbjct 3034086 GGCCGATTGATCTTCCAATATGCTAATTTCAACAACTCTCATCTGTTACACTTCTTCCTA 3034027 Query 29410 GCTGCCTGGCCGGTGGTAGGGATTTGGTTCGCTGCCTTGGGCGTTTCTAC--AATGGCGT 29467 | ||| ||||| || || || || |||| | |||| || | || || | ||||| | Sbjct 3034026 GTTGCTTGGCCTGTAGTGGGCATCTGGTCCACTGCTTTAG--GTATCAGCGATATGGCTT 3033969 Query 29468 TTAATCTGAACGGTTTTAACTTTAACCA 29495 | ||| | |||| ||| || || |||| Sbjct 3033968 TCAATTTAAACGATTTCAATTTCGACCA 3033941 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146637322505656