Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sesamum_20indicum_20[refseq_20GCF_5F000512975.1_202014-01-06] 16,236 sequences; 275,059,498 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq11 84.2 2e-11 seq8 84.2 2e-11 >seq11 Length=15446199 Score = 84.2 bits (92), Expect = 2e-11 Identities = 150/219 (68%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 131905 CAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACG 131964 ||| |||| || | ||| | | |||| ||||| || || ||||| || || || | Sbjct 11225735 CAACCGCAGCACAAGATGAAGGGTTGATTCTTTCTGGATATTGTAATCTGCCAGCGTCCT 11225676 Query 131965 CGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTC 132024 |||||| || |||||||||| | |||| | | ||| || || ||||| || ||||| Sbjct 11225675 TCCATCTTCAAGTTGTTTACCGGCAAAGATCAATCTCTGCTGGTCAGGAGGGATTCCTTC 11225616 Query 132025 TTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGT 132084 ||| || |||||| || | | || | ||||| | || ||||| | || Sbjct 11225615 TTTGTCCTGGATTTTTGCCTTAACATTGTCAATTGTATCTGAACTTTCAACTTCCAGAGT 11225556 Query 132085 CAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 | ||| |||||||| ||||| |||| ||||||||||| Sbjct 11225555 AATCGTCTTACCAGTAAGAGTCTTTACAAAAATCTGCAT 11225517 Score = 84.2 bits (92), Expect = 2e-11 Identities = 150/219 (68%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 131905 CAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACG 131964 ||||||||| |||| ||| | ||||||| ||||| ||||||||||| | || | Sbjct 13253403 CAAGCGCAAGACCAGATGGAGAGTTGACTCCTTTTGGATGTTGTAGTCTGCAAGTGTCCT 13253462 Query 131965 CGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTC 132024 ||| || ||||||||||| | | |||| | || || || |||||||| || ||||| Sbjct 13253463 ACCATCCTCAAGCTGTTTACCAGCAAAGATCAATCGTTGCTGGTCTGGAGGAATACCTTC 13253522 Query 132025 TTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGT 132084 ||| || ||||||| || | | || | ||||| | ||| || || | || Sbjct 13253523 TTTGTCCTGAATTTTTGCCTTGACGTTGTCTATTGTATCCGAACTCTCAACCTCCAAAGT 13253582 Query 132085 CAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 | || || ||||||| || || | || |||||||| Sbjct 13253583 AATGGTCTTCCCAGTCAAGGTCTTGACAAAGATCTGCAT 13253621 >seq8 Length=21523998 Score = 84.2 bits (92), Expect = 2e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 131933 TCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAATAG 131992 ||||| || |||||||||||| || || || ||||| ||||| || |||| | Sbjct 16226393 TCTTTCTGTATGTTGTAGTCGGACAAAGTGCGTTCGTCTTCCAGCTGCTTGCCGGCGAAT 16226334 Query 131993 ATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAACTGT 132052 || || || ||||| || ||||| | |||||||| || |||||| |||| | | Sbjct 16226333 ATCAGTCGTTGTTGGTCCGGAGGAACCCCTTCTTTTTCTTGAATTTTGGACTTCACATTT 16226274 Query 132053 TCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTATG 132112 || ||||| || || |||||| || | || | ||||| || |||| || || | | Sbjct 16226273 TCTACAGTGTCCGTACTCTCCACATCCAGAGTTATGGTTTTTCCGGTCAAGGTCTTAACG 16226214 Query 132113 AAAATCTGCAT 132123 || |||||||| Sbjct 16226213 AAGATCTGCAT 16226203 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476514471756960