Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sesamum_20indicum_20[refseq_20GCF_5F000512975.1_202014-01-06] 16,236 sequences; 275,059,498 total letters Query= NC_026430.1 Length=125767 Score E Sequences producing significant alignments: (Bits) Value seq11 107 2e-18 >seq11 Length=15446199 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 ||||| |||||||| ||||| |||| |||||||| |||||| ||||| || | Sbjct 13442082 ATGCAGATTTTTGTAAAAACCCTGACGGGCAAGACTATTACCCTGGAAGTTGAGAGCTCT 13442141 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 ||| | ||| | | || ||| ||||||| ||||||||||| | || |||||| Sbjct 13442142 GATACAATTGACAATGTAAAAGCAAAAATTCAGGACAAAGAAGGAATTCCACCAGATCAA 13442201 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 || ||||| |||| || ||||| || || |||||| | ||| ||| |||||| || Sbjct 13442202 CAGAGGCTGATTTTCGCTGGCAAGCAGTTGGAAGATGGAAGGACTCTGGCCGATTATAAT 13442261 Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486 || || || || || || | ||||| || ||||| | || || || Sbjct 13442262 ATTCAGAAGGAGTCGACTTTGCATTTGGTCCTGAGGCTGCGCGGTGG 13442308 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 402249988527488