Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sesamum_20indicum_20[refseq_20GCF_5F000512975.1_202014-01-06] 16,236 sequences; 275,059,498 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq11 116 3e-21 seq8 111 1e-19 seq14 95.1 1e-14 seq6 89.7 4e-13 >seq11 Length=15446199 Score = 116 bits (128), Expect = 3e-21 Identities = 146/198 (74%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCG-CTCATGTTGCGCTCGTCTTCGAGCTGTTTACC 27109 || || || || ||||||||||| ||| || ||| || | || || | |||||| || Sbjct 13445122 GTGGATTCCTTCTGAATATTGTAATCGGCTAGGGTTCTGC-CATCCTCCAACTGTTTCCC 13445064 Query 27110 GGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTT 27169 ||| |||| |||||||| |||||||| || | || || || || ||||||| || Sbjct 13445063 AGCGAAAATCAGACGCTGCTGATCCGGTGGAATTCCTTCCTTGTCCTGGATCTTGGCCTT 13445004 Query 27170 CAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGT 27229 | | || | ||||||| || ||| ||||| ||||| || | |||||| || || || Sbjct 13445003 AACATTGTCGATGGTGTCTGAGGTTTCGACTTCGAGAGTAATTGTTTTGCCAGTTAGGGT 13444944 Query 27230 TTTCACAAAGATTTGCAT 27247 |||||||||||||||||| Sbjct 13444943 TTTCACAAAGATTTGCAT 13444926 Score = 114 bits (126), Expect = 1e-20 Identities = 144/198 (73%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 27050 CGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACC 27109 ||| || || || || || ||||| ||| || | | | ||||||||||||| || || Sbjct 13441823 CGTGGACTCCTTCTGGATGTTGTAATCGGCCAAGGTTCTGCCGTCTTCGAGCTGCTTCCC 13441764 Query 27110 GGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTT 27169 |||| | ||||| ||||| ||||||||||| | ||||| || || |||||| || Sbjct 13441763 GGCGAAGATGAGGCGCTGCTGATCCGGCGGAATTCCCTCCTTGTCTTGGATCTTAGCCTT 13441704 Query 27170 CAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGT 27229 | | | |||| ||||||| | || || || || || || | ||| || |||||||| Sbjct 13441703 GACGTTGTCTATGGTGTCTGAGCTCTCCACCTCCAGCGTGATCGTTTTTCCGGTCAGAGT 13441644 Query 27230 TTTCACAAAGATTTGCAT 27247 |||||| ||||| ||||| Sbjct 13441643 TTTCACGAAGATCTGCAT 13441626 Score = 100 bits (110), Expect = 2e-16 Identities = 141/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 27050 CGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACC 27109 ||| || || || || || ||||| ||| || | | | ||||||||||||| || || Sbjct 13441595 CGTGGACTCCTTCTGGATGTTGTAATCGGCCAAGGTTCTGCCGTCTTCGAGCTGCTTCCC 13441536 Query 27110 GGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTT 27169 |||| | ||||| ||||| ||||| ||||| | ||||| || || |||||| || Sbjct 13441535 GGCGAAGATGAGGCGCTGCTGATCTGGCGGAATTCCCTCCTTGTCTTGGATCTTAGCCTT 13441476 Query 27170 CAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGT 27229 | | | |||| ||||| | ||||| || || || || | ||| ||||| || || Sbjct 13441475 AACGTTATCTATCGTGTCGGAACTCTCAACCTCCAGCGTGATCGTTTTTCCCGTTAGGGT 13441416 Query 27230 TTTCACAAAGATTTGCAT 27247 ||||||||| || ||||| Sbjct 13441415 TTTCACAAAAATCTGCAT 13441398 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || ||||||| || || |||||||| || || || || || |||||||| || ||| | Sbjct 13442308 CCACCGCGCAGCCTCAGGACCAAATGCAAAGTCGACTCCTTCTGAATATTATAATCGGCC 13442249 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | | | ||||| | ||| || || ||| |||| || | ||||||||| || || Sbjct 13442248 AGAGTCCTTCCATCTTCCAACTGCTTGCCAGCGAAAATCAGCCTCTGTTGATCTGGTGGA 13442189 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | || ||||| || || || ||| | | || | || || | | |||||| Sbjct 13442188 ATTCCTTCTTTGTCCTGAATTTTTGCTTTTACATTGTCAATTGTATCAGAGCTCTCAACT 13442129 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || || || |||| ||||||||||| ||||| ||||| || ||||| Sbjct 13442128 TCCAGGGTAATAGTCTTGCCCGTCAGGGTTTTTACAAAAATCTGCAT 13442082 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCG-CT 27079 || ||||| | |||| |||||||| | || || || |||||||||||||||||| || Sbjct 13442080 CCACCGCGGAGTCGCAGCACCAAATGAAGAGTCGATTCCTTTTGAATATTGTAGTCGGCT 13442021 Query 27080 CATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGG 27139 ||| | | || || || ||||| |||||| | || | | || ||||| ||||| Sbjct 13442020 AGAGTTCTAC-CATCCTCCAGTTGTTTTCCGGCGAAGATCAACCTTTGCTGATCGGGCGG 13441962 Query 27140 CACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAAC 27199 | || || || || || || || | | | |||| ||||||| | || || Sbjct 13441961 TATCCCTTCCTTGTCCTGAATTTTAGCCTTGACGTTGTCTATGGTGTCTGAGCTCTCCAC 13441902 Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || || || || | |||||| ||||||||||| |||||||| ||||| Sbjct 13441901 CTCGAGGGTGATTGTTTTGCCGGTCAGAGTTTTTACAAAGATCTGCAT 13441854 Score = 87.8 bits (96), Expect = 2e-12 Identities = 138/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 27050 CGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACC 27109 ||| || || || || || ||||| ||| | | | | |||| |||||||| || || Sbjct 13441367 CGTGGATTCCTTCTGGATGTTGTAATCGGCAAGGGTTCTGCCGTCCTCGAGCTGCTTTCC 13441308 Query 27110 GGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTT 27169 |||| | ||||||||||| |||||||| || | || || ||||| |||||| || Sbjct 13441307 GGCGAAGATGAGACGCTGCTGATCCGGAGGAATTCCTTCCTTATCCTGGATCTTCGCCTT 13441248 Query 27170 CAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGT 27229 | | | || | || || | | || ||||| || || || | ||||| || | || Sbjct 13441247 GACGTTATCGATGGTATCGGAGCTCTCGACTTCGAGGGTAATGGTCTTGCCGGTTAAGGT 13441188 Query 27230 TTTCACAAAGATTTGCAT 27247 |||||||||||| ||||| Sbjct 13441187 TTTCACAAAGATCTGCAT 13441170 >seq8 Length=21523998 Score = 111 bits (122), Expect = 1e-19 Identities = 139/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 27057 TCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAA 27116 ||||| || || ||||||||| || |||| |||||||| ||||| || |||||| | Sbjct 16226393 TCTTTCTGTATGTTGTAGTCGGACAAAGTGCGTTCGTCTTCCAGCTGCTTGCCGGCGAAT 16226334 Query 27117 ATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTT 27176 || || || ||||| ||||| || || || ||||| || || ||| |||| || Sbjct 16226333 ATCAGTCGTTGTTGGTCCGGAGGAACCCCTTCTTTTTCTTGAATTTTGGACTTCACATTT 16226274 Query 27177 TCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACA 27236 ||||||||||| || || || || |||||||| | ||| || |||| || || || Sbjct 16226273 TCTACAGTGTCCGTACTCTCCACATCCAGAGTTATGGTTTTTCCGGTCAAGGTCTTAACG 16226214 Query 27237 AAGATTTGCAT 27247 ||||| ||||| Sbjct 16226213 AAGATCTGCAT 16226203 >seq14 Length=4882680 Score = 95.1 bits (104), Expect = 1e-14 Identities = 150/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 27033 CGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCG 27092 ||||| ||||| || | ||||| || || || || ||||||||| | | |||| || Sbjct 1411661 CGCAAGACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGTCCG 1411720 Query 27093 TCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTA 27152 ||||| ||||| || |||||| | || | | ||| || ||||| || | || || || Sbjct 1411721 TCTTCAAGCTGCTTTCCGGCGAAGATTAACCTCTGCTGGTCCGGGGGAATTCCTTCCTTG 1411780 Query 27153 TCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATA 27212 || ||||||| || | | | || | ||||| | ||| || || || || || Sbjct 1411781 TCCTGGATCTTGGCCTTAACGTTGTCGATGGTGTCCGAACTTTCCACCTCAAGGGTGATG 1411840 Query 27213 GATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 | ||||| || ||||||||||| ||||| ||||| Sbjct 1411841 GTCTTGCCTGTAAGAGTTTTCACGAAGATCTGCAT 1411875 Score = 89.7 bits (98), Expect = 4e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 27019 TGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGC 27078 ||||||| || | |||| ||||| || | ||||| || || || || ||||||||| Sbjct 1411191 TGCCTCCACGGAGACGCAGGACCAAGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGG 1411250 Query 27079 TCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCG 27138 | | |||| |||| ||||||||||| || ||| | || | | ||| || ||||| | Sbjct 1411251 CAAGGGTGCGACCGTCCTCGAGCTGTTTGCCAGCGAAGATCAACCTCTGCTGGTCCGGGG 1411310 Query 27139 GCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAA 27198 | | || || || || ||||||| || | | || | ||||| | | ||| | Sbjct 1411311 GGATTCCTTCCTTGTCCTGGATCTTGGCCTTGACATTGTCAATGGTGTCGGAGCTTTCCA 1411370 Query 27199 CTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 | || || || || | ||||| || || || ||||| || |||||||| Sbjct 1411371 CCTCAAGGGTGATGGTCTTGCCTGTGAGGGTCTTCACGAAAATTTGCAT 1411419 >seq6 Length=25289714 Score = 89.7 bits (98), Expect = 4e-13 Identities = 140/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGT-TGCGCTCGTCTTCGAGCTGTTTACC 27109 || || || || || || |||||||| | || | |||| | || ||||||||||| || Sbjct 19867597 GTGGACTCCTTCTGGATGTTGTAGTC-CGCAAGCGTGCGGCCATCCTCGAGCTGTTTCCC 19867539 Query 27110 GGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTT 27169 |||| | |||||||| || || ||||| || | || || ||||| ||||||| || Sbjct 19867538 GGCGAAGATGAGACGTTGCTGGTCCGGGGGGATGCCTTCCTTATCCTGGATCTTGGCCTT 19867479 Query 27170 CAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGT 27229 | | | || | || || | || ||| || || | ||||| | |||||||| || || Sbjct 19867478 AACGTTGTCGATGGTATCGGAGGATTCTACCTCCAAGGTTATGGTCTTGCCCGTAAGGGT 19867419 Query 27230 TTTCACAAAGATTTGCAT 27247 ||||| || || ||||| Sbjct 19867418 CTTCACGAAAATCTGCAT 19867401 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424850315574432