Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sesamum_20indicum_20[refseq_20GCF_5F000512975.1_202014-01-06] 16,236 sequences; 275,059,498 total letters Query= NC_028663.1 Length=188632 Score E Sequences producing significant alignments: (Bits) Value seq16236 581 4e-161 seq8 322 6e-83 seq6 185 1e-41 seq2 123 3e-23 seq553 120 4e-22 seq35 87.8 2e-12 seq3 84.2 3e-11 >seq16236 Length=153324 Score = 581 bits (644), Expect = 4e-161 Identities = 703/954 (74%), Gaps = 2/954 (0%) Strand=Plus/Minus Query 176147 TTTACGTTGGTTGGTTTGGTGTGCTCATGATTCCATGTCTGCTCACTGCTGCAGCATGT- 176205 ||||| |||| ||||||||||| | ||||| || | | || || | | ||| Sbjct 1359 TTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACCTTATTGACCGCAACTTC-TGTA 1301 Query 176206 TTTATCGTTGCATTTATTGCAGCACCACCTGTCGATATCGACGGTATTCGCGAACCAGTA 176265 ||||| |||| || ||||| || || || || ||||| || |||||||| ||||| || Sbjct 1300 TTTATTATTGCCTTCATTGCTGCCCCTCCAGTAGATATTGATGGTATTCGTGAACCTGTT 1241 Query 176266 GCAGGATCTCTACTCTATGGAAACAACATCATCTCAGGAGCAGTCGTCCCAAGCTCAAAC 176325 | |||||| |||| || |||||||| || |||||||| || | | || | || Sbjct 1240 TCTGGATCTTTACTTTACGGAAACAATATTATCTCAGGTGCCATTATTCCTACTTCTGCA 1181 Query 176326 GCAATCGGACTACACTTCTACCCAATCTGGGAAGCAGCAACAGTTGACGAATGGCTCTAC 176385 || ||||| | ||||| |||||||| |||||||||||| | ||||| |||||| | ||| Sbjct 1180 GCTATCGGTTTGCACTTTTACCCAATTTGGGAAGCAGCATCCGTTGATGAATGGTTATAC 1121 Query 176386 AATGGAGGACCATACCAACTCGTTGTATTCCACTTCCTTATCGGTATCTCAGCTTACATG 176445 || || || || || |||| |||| | |||||| | | ||| | | ||||||| Sbjct 1120 AACGGTGGTCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGTTACATG 1061 Query 176446 GGACGCCAATGGGAACTTAGTTACAGACTAGGCATGCGTCCTTGGATCTGTGTTGCATAC 176505 || || | ||||||||||||| | | || || ||||| |||||||| ||||||||| Sbjct 1060 GGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGACCTTGGATTGCTGTTGCATAT 1001 Query 176506 TCTGCACCAGTATCTGCAGCGATGGCAGTTTTCCTCGTCTATCCATTCGGTCAAGGATCT 176565 || || || || | || || | || |||||| | |||| ||| ||||||||||| | Sbjct 1000 TCAGCTCCTGTTGCAGCTGCTACCGCTGTTTTCTTGATCTACCCAATCGGTCAAGGAAGT 941 Query 176566 TTCTCTGATGGTATGCCTCTTGGCATTTCAGGTACATTCAACTTTATGTTTGTATTCCAA 176625 || ||||||||||||||||| || ||||| ||||| |||||||| ||| |||||||||| Sbjct 940 TTTTCTGATGGTATGCCTCTAGGAATTTCTGGTACTTTCAACTTCATGATTGTATTCCAG 881 Query 176626 GCAGAGCACAACATTCTAATGCACCCATTCCATATGCTTGGAGTAGCAGGTGTGTTTGGT 176685 || ||||||||||| || ||||||||||| || ||| | || ||||| ||||| || || Sbjct 880 GCTGAGCACAACATCCTTATGCACCCATTTCACATGTTAGGCGTAGCTGGTGTATTCGGC 821 Query 176686 GGATCTCTTTTCTCAGCAATGCACGGAAGTCTTGTTACTTCTTCACTTGTTAGAGAGACA 176745 || || || ||| || ||||| || | || |||||| | | || || || Sbjct 820 GGCTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACC 761 Query 176746 ACCGAAAACGAATCACAAAACTACGGTTACAAATTCGGACAAGAAGAAGAGACATACAAC 176805 || ||||| ||||| || | ||||||| |||||| ||||| ||||| || || || Sbjct 760 ACAGAAAATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAAGAAACTTATAAT 701 Query 176806 ATTGTAGCTGCACACGGTTACTTTGGTCGTCTTATCTTCCAGTATGCTTCTTTCAATAAC 176865 || ||||| || || ||||| ||||| || | |||||||| |||||| |||||| ||| Sbjct 700 ATCGTAGCCGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTCAACAAC 641 Query 176866 TCAAGAAGTCTTCACTTCTTCCTTGCAGCATTCCCAGTTGTTTGCATCTGGTTTACTGCA 176925 || | | ||||||||||| || || | || || || | |||||||| ||||| Sbjct 640 TCTCGTTCGTTACACTTCTTCCTAGCTGCTTGGCCTGTAGTGGGTATCTGGTTCACTGCT 581 Query 176926 ATGGGTGTTTGCACAATGGCATTCAACCTTAACGGTTTCAACTTCAACCAGTCTGTCTTA 176985 | ||| | |||| ||||| |||||||| ||||||||||| |||||||| ||||| | Sbjct 580 TTAGGTATCAGCACTATGGCTTTCAACCTAAACGGTTTCAATTTCAACCAATCTGTAGTT 521 Query 176986 GACAACTCTGGTAAAGTGATTCCTACATGGGGAGATATCCTTAACCGTGCAAACCTTGGT 177045 || | || || ||| ||| |||| |||||| | |||||||| ||||||||| Sbjct 520 GATAGTCAAGGCCGTGTAATTAATACTTGGGCTGATATCATCAACCGTGCTAACCTTGGT 461 Query 177046 ATGGAAGTTATGCACGAGCGTAATGCTCACAACTTCCCACTTGACCTTGCTGCT 177099 |||||||||||||| || ||||||||||| |||||||| || ||||| |||||| Sbjct 460 ATGGAAGTTATGCATGAACGTAATGCTCATAACTTCCCTCTAGACCTAGCTGCT 407 Score = 132 bits (146), Expect = 6e-26 Identities = 204/288 (71%), Gaps = 6/288 (2%) Strand=Plus/Minus Query 19295 ACCTGTAACAGTACAGTATCCTTACGAGAAACTCATACCGTCAGAGAGATACCGTGGTCG 19354 ||||||||| | || || || ||||| ||| | || | || || | | ||| || || Sbjct 119547 ACCTGTAACTATTCAATACCCCTACGAAAAATTGATCACATCGGAACGTTTCCGAGGCCG 119488 Query 19355 TATACACTATGAGTTTGACAAGTGTATCGCCTGTGAGGTGTGTGTAAGAGTATGCCCTAT 19414 || || | ||| ||||| || || || || ||||| || ||||| | ||||| ||||| Sbjct 119487 AATCCATTTTGAATTTGATAAATGCATTGCTTGTGAAGTATGTGTTCGTGTATGTCCTAT 119428 Query 19415 CAATCTACCAGTGGTGGATTGGGTGATGAACA--AACAGAC-AAAGAAGAAAGAACTTAG 19471 ||||||| || || |||||| || | | || | | |||||| | ||||| Sbjct 119427 AGATCTACCCGTTGTTGATTGGAAATTGGAGACTAATATTCGAAAGAAACGATTACTTA- 119369 Query 19472 AAATTATTCGATAGACTTTGGAGCATGTATTTTCTGCGGTAACTGCGTAGAGTATTGCCC 19531 |||| || || |||||| ||||| || || ||||| ||||| |||||||| || Sbjct 119368 --ATTACAGTATTGATTTTGGAATCTGTATATTTTGTGGTAATTGCGTTGAGTATTGTCC 119311 Query 19532 AACAAACTGTCTATCCATGACAGAAGAATATGAATTGGCTACATTTGA 19579 |||||| ||| |||| ||||| |||||||||||| | |||| | ||| Sbjct 119310 AACAAATTGTTTATCAATGACTGAAGAATATGAACTTTCTACTTATGA 119263 >seq8 Length=21523998 Score = 322 bits (356), Expect = 6e-83 Identities = 435/604 (72%), Gaps = 8/604 (1%) Strand=Plus/Plus Query 176496 TGTTGCATACTCTGCACCAGTATCTGCAGCGATGGCAGTTTTCCTCGTCTATCCATTCGG 176555 ||||||||| || || | || | || || | | ||||| | |||| ||| ||| Sbjct 7119346 TGTTGCATATTCAGCTCGTGTTGCAGCTGCTACCACTATTTTCTTGATCTACCCAATCGA 7119405 Query 176556 TCAAGGATCTTTCTCTGATGGTATGCCTCTTGGCATTTCAGGTACATTCAACTTTATGTT 176615 ||||||| ||| ||||||||||||||||| || ||||| ||||| |||||||| ||| | Sbjct 7119406 TCAAGGAAGTTTTTCTGATGGTATGCCTCTAGGAATTTCTGGTACTTTCAACTTCATGAT 7119465 Query 176616 TGTATTCCAAGCAGAGCACAACATTCTAATGCACCCATTCCATATGCTTGGAGTAGCAGG 176675 ||||||||| || |||||||||| || ||||||||||| || ||| | || ||||| || Sbjct 7119466 TGTATTCCAGGCTGAGCACAACAACCTTATGCACCCATTTCACATGTTAGGTGTAGCTGG 7119525 Query 176676 TGTGTTTGGTGGATCTCTTTTCTCAGCAATGCACGGAAGTCTTGTTACTTCTTCACTTGT 176735 ||| || || || || || ||| || ||||| || | || |||||| | | Sbjct 7119526 TGTATTCGGCGGTTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACTTCTAGTTTGAT 7119585 Query 176736 TAGAGAGACAACCGAAAACGAATCACAAAACTACGGTTACAAATTCGGACAAGAAGAAGA 176795 || || || || ||||| ||||| || | ||| ||| ||| | |||||| Sbjct 7119586 CAGGGAAACCACAGAAAATGAATCTGCTAAAGAAGGTCACAGGTTCAGTCAAGAA----- 7119640 Query 176796 GACATACAACATTGTAGCTGCACACGGTTACTTTGGTCGTCTTATCTTCCAGTATGCTTC 176855 || || || || |||| || || ||||| ||||| || | |||||||| ||| || Sbjct 7119641 -ACTTATAATATCATAGCAGCTCATGGTTATTTTGGCCGATTGATCTTCCA-TATACTAG 7119698 Query 176856 TTTCAATAACTCAAGAAGTCTTCACTTCTTCCTTGCAGCATTCCCAGTTGTTTGCATCTG 176915 |||||| | ||| | | ||||||||||| || || | || | ||| | ||||| Sbjct 7119699 TTTCAACAGCTCCCATCAT-TACACTTCTTCCTAGCTGCCTGGCCTATAGTTCGTATCTG 7119757 Query 176916 GTTTACTGCAATGGGTGTTTGCACAATGGCATTCAACCTTAACGGTTTCAACTTCAACCA 176975 || ||| | | ||| | |||| ||||| |||||||| ||||||||||| |||||||| Sbjct 7119758 CTTCACTCCTTTAGGTATCAGCACTATGGCTTTCAACCTAAACGGTTTCAATTTCAACCA 7119817 Query 176976 GTCTGTCTTAGACAACTCTGGTAAAGTGATTCCTACATGGGGAGATATCCTTAACCGTGC 177035 ||||| | || | | || || ||| ||| |||| ||||| | |||||||| Sbjct 7119818 ATCTGTAGTTGATAGCCAAGGCTGTGTAATTAATACCTGGGTTGATATGATCAACCGTGC 7119877 Query 177036 AAACCTTGGTATGGAAGTTATGCACGAGCGTAATGCTCACAACTTCCCACTTGACCTTGC 177095 |||||||||||||||||||||| || ||||||||||| |||||||| || ||||| || Sbjct 7119878 TAACCTTGGTATGGAAGTTATGCGTGAACGTAATGCTCATAACTTCCCTCTAGACCTAGC 7119937 Query 177096 TGCT 177099 |||| Sbjct 7119938 TGCT 7119941 >seq6 Length=25289714 Score = 185 bits (204), Expect = 1e-41 Identities = 177/227 (78%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 176439 TTACATGGGACGCCAATGGGAACTTAGTTACAGACTAGGCATGCGTCCTTGGATCTGTGT 176498 ||||||||| || | ||||||||||||| | | || || ||||| | |||||| ||| Sbjct 6246909 TTACATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGACATTGGATTGCTGT 6246968 Query 176499 TGCATACTCTGCACCAGTATCTGCAGCGATGGCAGTTTTCCTCGTCTATCCATTCGGTCA 176558 |||||| | | || || | || || | || |||||| | |||| ||| ||||||| Sbjct 6246969 TGCATATCCAACTCCTGTTGCAGCTGCTACCGCTGTTTTCTTGATCTACCCAATCGGTCA 6247028 Query 176559 AGGATCTTTCTCTGATGGTATGCCTCTTGGCATTTCAGGTACATTCAACTTTATGTTTGT 176618 |||| ||| ||||||||||||||||| || ||||| ||||| |||||||| ||| |||| Sbjct 6247029 AGGAAGTTTTTCTGATGGTATGCCTCTAGGAATTTCTGGTACTTTCAACTTCATGATTGT 6247088 Query 176619 ATTCCAAGCAGAGCACAACATTCTAATGCACCCATTCCATATGCTTG 176665 |||||| || ||||| ||||| || ||||||||||| || ||| ||| Sbjct 6247089 ATTCCAGGCTGAGCAGAACATCCTTATGCACCCATTTCACATGTTTG 6247135 >seq2 Length=18500646 Score = 123 bits (136), Expect = 3e-23 Identities = 170/234 (73%), Gaps = 3/234 (1%) Strand=Plus/Minus Query 176749 GAAAACGAATCACAAAACTACGGTTACAAATTCGGACAAGAAGAAGAGACATACAACATT 176808 ||||| ||||| || | |||||||||||||| ||||| ||||| || || || || Sbjct 3034166 GAAAATGAATCTGCTAATGAAGGTTACAAATTCGGTCAAGAGGAAGAAACTTATAATATC 3034107 Query 176809 GTAGCTGCACACGGTTACTTTGGTCGTCTTATCTTCCAGTATGCTTCTTTCAATAACTCA 176868 ||||| || || ||||| ||||| || | |||||||| |||||| |||||| ||||| Sbjct 3034106 GTAGC-GCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAATTTCAACAACTCT 3034048 Query 176869 AGAAGTCTT-CACTTCTTCCTTGCAGCATTCCCAGTTGTTTGCATCTGGTTTACTGCAAT 176927 | | || ||||||||||| | || | || || || ||||||||| ||||| | Sbjct 3034047 C-ATCTGTTACACTTCTTCCTAGTTGCTTGGCCTGTAGTGGGCATCTGGTCCACTGCTTT 3033989 Query 176928 GGGTGTTTGCACAATGGCATTCAACCTTAACGGTTTCAACTTCAACCAGTCTGT 176981 ||| | || ||||| ||||| | |||| |||||| ||| |||| |||| Sbjct 3033988 AGGTATCAGCGATATGGCTTTCAATTTAAACGATTTCAATTTCGACCAACCTGT 3033935 >seq553 Length=3761 Score = 120 bits (132), Expect = 4e-22 Identities = 201/288 (70%), Gaps = 6/288 (2%) Strand=Plus/Plus Query 19295 ACCTGTAACAGTACAGTATCCTTACGAGAAACTCATACCGTCAGAGAGATACCGTGGTCG 19354 ||||||||| | || || || ||||| ||| | || | || || | | || || || Sbjct 2139 ACCTGTAACTATTCAATACCCCTACGAAAAATTGATCACATCGGAACGTTTCCAAGGCCG 2198 Query 19355 TATACACTATGAGTTTGACAAGTGTATCGCCTGTGAGGTGTGTGTAAGAGTATGCCCTAT 19414 || || | ||| ||||| || || || || ||||| || ||||| | ||||| ||||| Sbjct 2199 AATCCATTTTGAATTTGATAAATGCATTGCTTGTGAAGTATGTGTTCGTGTATGTCCTAT 2258 Query 19415 CAATCTACCAGTGGTGGATTGGGTGATGAACA--AACAGAC-AAAGAAGAAAGAACTTAG 19471 ||||||| || || |||||| || | | || | | |||||| | ||||| Sbjct 2259 AGATCTACCCGTTGTTGATTGGAAATTGGAGACTAATATTCGAAAGAAACGATTACTTA- 2317 Query 19472 AAATTATTCGATAGACTTTGGAGCATGTATTTTCTGCGGTAACTGCGTAGAGTATTGCCC 19531 |||| || || ||| || ||||| || || ||||| ||||| |||||||| || Sbjct 2318 --ATTACAGTATTGATTTTTGAATCTGTATATTTTGTGGTAATTGCGTTGAGTATTGTCC 2375 Query 19532 AACAAACTGTCTATCCATGACAGAAGAATATGAATTGGCTACATTTGA 19579 |||||| || |||| ||||| |||||||||||| | |||| | ||| Sbjct 2376 AACAAATTGGTTATCAATGACTGAAGAATATGAACTTTCTACTTATGA 2423 >seq35 Length=429111 Score = 87.8 bits (96), Expect = 2e-12 Identities = 78/98 (80%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 19482 ATAGACTTTGGAGCATGTATTTTCTGCGGTAACTGCGTAGAGTATTGCCCAACAAACTGT 19541 || || |||||| ||||| || || ||||| ||||| |||||||| |||||||| ||| Sbjct 308484 ATTGATTTTGGAATCTGTATATTTTGTGGTAATTGCGTTGAGTATTGTCCAACAAATTGT 308425 Query 19542 CTATCCATGACAGAAGAATATGAATTGGCTACATTTGA 19579 |||| ||||| |||||||||||| | |||| | ||| Sbjct 308424 TTATCAATGACTGAAGAATATGAACTTTCTACTTATGA 308387 >seq3 Length=24928530 Score = 84.2 bits (92), Expect = 3e-11 Identities = 123/173 (71%), Gaps = 1/173 (1%) Strand=Plus/Plus Query 176239 GATATCGACGGTATTCGCGAACCAGTAGCAGGATCTCTACTCTATGGAAACAACATCATC 176298 ||||| || ||| |||| ||||| || | |||||| |||| |||||||||||||| ||| Sbjct 18510401 GATATTGATGGTTTTCGTGAACCTGTTTCTGGATCT-TACTTTATGGAAACAACATTATC 18510459 Query 176299 TCAGGAGCAGTCGTCCCAAGCTCAAACGCAATCGGACTACACTTCTACCCAATCTGGGAA 176358 ||| | | | | || | || || ||||| || ||| | | |||||| |||||| Sbjct 18510460 TCAAGTGTCATTATTCCTACTTCTGCAGCTATCGGTCTCCACGTTTGCCCAATTTGGGAA 18510519 Query 176359 GCAGCAACAGTTGACGAATGGCTCTACAATGGAGGACCATACCAACTCGTTGT 176411 ||| || | |||| |||||| | || | | | ||||| ||||| |||| Sbjct 18510520 GCATCACCCATTGATGAATGGTTATAAACCAGTAGTCCATATCAACTAATTGT 18510572 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 603371920811520