Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sesamum_20indicum_20[refseq_20GCF_5F000512975.1_202014-01-06] 16,236 sequences; 275,059,498 total letters Query= NC_029046.1 Length=50827 Score E Sequences producing significant alignments: (Bits) Value seq16236 82.4 2e-11 seq9 82.4 2e-11 seq3 82.4 2e-11 >seq16236 Length=153324 Score = 82.4 bits (90), Expect = 2e-11 Identities = 62/73 (85%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 21150 CGGAGTAGAGCAGCCCGGTAGCTCGCGTGGCTCATAACCACGAGGTCGCAGGTTCGAATC 21209 ||| ||||||||| |||||||||| ||||||||||| |||||| | ||||| |||| Sbjct 37272 CGGGGTAGAGCAGTTTGGTAGCTCGCAAGGCTCATAACCTTGAGGTCACGGGTTCAAATC 37213 Query 21210 CTGTCTCCGCAAC 21222 ||||||||||||| Sbjct 37212 CTGTCTCCGCAAC 37200 >seq9 Length=12411895 Score = 82.4 bits (90), Expect = 2e-11 Identities = 62/73 (85%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 21150 CGGAGTAGAGCAGCCCGGTAGCTCGCGTGGCTCATAACCACGAGGTCGCAGGTTCGAATC 21209 ||| ||||||||| |||||||||| ||||||||||| |||||| | ||||| |||| Sbjct 8950043 CGGGGTAGAGCAGTTTGGTAGCTCGCAAGGCTCATAACCTTGAGGTCACGGGTTCAAATC 8949984 Query 21210 CTGTCTCCGCAAC 21222 ||||||||||||| Sbjct 8949983 CTGTCTCCGCAAC 8949971 >seq3 Length=24928530 Score = 82.4 bits (90), Expect = 2e-11 Identities = 62/73 (85%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 21150 CGGAGTAGAGCAGCCCGGTAGCTCGCGTGGCTCATAACCACGAGGTCGCAGGTTCGAATC 21209 ||| ||||||||| |||||||||| ||||||||||| |||||| | ||||| |||| Sbjct 17022640 CGGGGTAGAGCAGTTTGGTAGCTCGCAAGGCTCATAACCTTGAGGTCACGGGTTCAAATC 17022699 Query 21210 CTGTCTCCGCAAC 21222 ||||||||||||| Sbjct 17022700 CTGTCTCCGCAAC 17022712 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 162493464812248