Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sesamum_20indicum_20[refseq_20GCF_5F000512975.1_202014-01-06] 16,236 sequences; 275,059,498 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq3 89.7 5e-13 >seq3 Length=24928530 Score = 89.7 bits (98), Expect = 5e-13 Identities = 93/122 (76%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 6617 ACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAAC 6676 |||||||| |||||| | || | ||||| || |||||||| ||||||||||| | Sbjct 22618213 ACATGAGCAATCATGCATGTCAATAGAGCATATGATGCAATGTTAAACGGCACCCCAAGG 22618272 Query 6677 CCCATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAAT 6736 ||||| ||| | |||||||| || | |||||| || ||||| ||||| || || || || Sbjct 22618273 CCCATATCTGCAGATCGTTGGTACATCTGGCAAGATAGCTCTCCATTGGCTACATAAAAC 22618332 Query 6737 TG 6738 || Sbjct 22618333 TG 22618334 Score = 89.7 bits (98), Expect = 5e-13 Identities = 93/122 (76%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 34607 CAATTCTACGTCGCGAATGGGGAGCTGTCCTGCCAGCTCTATCAACGATCGGGAGACATG 34666 || || || || || ||||| ||||| || |||||| | || |||||||| | ||| ||| Sbjct 22618334 CAGTTTTATGTAGCCAATGGAGAGCTATCTTGCCAGATGTACCAACGATCTGCAGATATG 22618275 Query 34667 GGGTTAGGGGTGCCGTTCAACATTGCTAGTTACGCTCTGCTCACGTACATGATCGCTCAT 34726 || | ||||||||||| |||||||| || ||||| | || | |||||| |||||| Sbjct 22618274 GGCCTTGGGGTGCCGTTTAACATTGCATCATATGCTCTATTGACATGCATGATTGCTCAT 22618215 Query 34727 GT 34728 || Sbjct 22618214 GT 22618213 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448171425145920