Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sesamum_20indicum_20[refseq_20GCF_5F000512975.1_202014-01-06] 16,236 sequences; 275,059,498 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq13 118 1e-21 seq15 109 6e-19 >seq13 Length=5050363 Score = 118 bits (130), Expect = 1e-21 Identities = 298/450 (66%), Gaps = 5/450 (1%) Strand=Plus/Minus Query 23509 CATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAATGTTAAT 23568 || |||||||||||||| | |||||||| | ||| |||||||| || || || || Sbjct 3176219 CACGCAAAATCACAATGCAAACCTTCATCTCGCGAAATTAATTCATTGGAGAAAGTCAAG 3176160 Query 23569 CCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGAT-CCGGAAAAGAA 23627 || ||||| | || || ||||| | ||||||||| || ||| | | | || || || || Sbjct 3176159 CCCGGCATCATCCCGCGCTTTTTCAACCAAAATATGGC-GCAGAAGCTCCCCGAGAAAAA 3176101 Query 23628 AATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTATAATCAGA 23687 || ||||||||| |||||||| || | || | |||| | | | | | || Sbjct 3176100 TATCCCCTCAACACAAGCAAAGGCGACTAACCGCTCAGCAAAGGAT---TCAGAGCCATC 3176044 Query 23688 AATCCAtttttttGTCCAATTAGCCTTCAATTTTACACACTCAATTGTTTCAATTGCTTT 23747 |||||| | | ||| || |||||| || || || || || |||||||| Sbjct 3176043 AATCCAGCGCATGGCCCACTTGGCCTTCTTTTCCACGCAAGGAACGGTCTCAATTGCGCG 3175984 Query 23748 TAAGAGAAAAGTTTTTTCTTCATTATCTGTTATATATGTATCAATTAGTAAACTATACAT 23807 ||||| |||| || | ||| | || || | |||| || | ||| ||||| Sbjct 3175983 GAAGAGGTGGTTTTTCTCGGCCGAGTCTTTGATGTAAGACTCAAGCAGAAGACTGTACAT 3175924 Query 23808 TTCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACATCTAGCTTCAGACAA 23867 || |||||||| || ||||| ||||| || || || || || | || || || | Sbjct 3175923 CTCGGAATGAATGTTCTCAATGGCAATTTGGAAGCCGTAGAAGGCACGGGCCTCGGAGAT 3175864 Query 23868 TTGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATACCATCACTAGCAGC 23927 || || || || | || | | ||| | |||||| ||| |||||||| ||||| Sbjct 3175863 CTGGACCTCTTTCATGAAGCGTCCAGCGAGATTTTCCAAAACGATACCATCGGAGGCAGC 3175804 Query 23928 AAAGAAAGCAAGAACATATTTTATAAAATG 23957 |||||| || || || | ||| | ||||| Sbjct 3175803 AAAGAAGGCGAGGACGTGTTTGACGAAATG 3175774 >seq15 Length=10047770 Score = 109 bits (120), Expect = 6e-19 Identities = 339/524 (65%), Gaps = 3/524 (1%) Strand=Plus/Plus Query 23506 AAACATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAATGTT 23565 || || |||||||| || || | || ||||||| || ||||| || || || ||| Sbjct 1769303 AAGCACGCAAAATCGCAGTGCAAACCCTCATCCCGTGAGATTAATTCGTTGGAGAAAGTT 1769362 Query 23566 AATCCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGGAAAAG 23625 || || ||||| || || || || || | ||||||||||||| || ||| || || Sbjct 1769363 AAACCCGGCATCAAACCACGCTTCTTCAGCCAAAATATTGCACAGAAGCTTCCCGAGAAA 1769422 Query 23626 AAAATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTATAATCA 23685 || || || || ||| ||||| | | | ||| |||| ||| || ||| Sbjct 1769423 AATATGCCTTCCACACAAGCAAATCCGATTAATCGTTCGGCAAAAGTTTCAGAGCCATCG 1769482 Query 23686 GAAATCCAtttttttGTCCAATTAGCCTTCAATTTTACACACTCAATTGTTTCAATTGCT 23745 ||||| | | ||| ||||||||| | ||||| | || || ||||| Sbjct 1769483 ---ATCCAGCGTAAAGCCCATTTAGCCTTCTTCTCCACACATGGGACAGTCTCGATTGCG 1769539 Query 23746 TTTAAGAGAAAAGTTTTTTCTTCATTATCTGTTATATATGTATCAATTAGTAAACTATAC 23805 || || | | || || | ||| ||||||| | |||| | | ||||||| Sbjct 1769540 CGAAAAAGCATGTTCTTCTCGGCCGAATCCTTTATATAGGATTCAAGCAAAAGACTATAC 1769599 Query 23806 ATTTCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACATCTAGCTTCAGAC 23865 || || ||||| || || ||||| ||||||||||||||||| || | ||| || || Sbjct 1769600 ATCTCGGAATGGATGTTCTCAATGGCAATCTGAAACCCATAGAAGGCACGAGCCTCGGAG 1769659 Query 23866 AATTGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATACCATCACTAGCA 23925 | ||||| || || | || | | ||| | || || |||||| |||||| || Sbjct 1769660 ACCTGAACTTCCTTCATGAAGCGTCCAGCAAGGTTCTCCAAAACAATGCCATCAGAGGCG 1769719 Query 23926 GCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCAGTTGATAATTTTTTCCAA 23985 || ||||| || ||||| | ||| || ||||| | || |||| | | |||| ||| Sbjct 1769720 GCGAAGAAGGCGAGAACGTGTTTGATGAAATGCTTCTCGTCAGAAGTGAGGTTTTCCCAG 1769779 Query 23986 TCATTAATATCTTTTGATAAATCAACTTCATCAACTGTCCAAAA 24029 | | |||| || ||||| ||||| || | ||||| || Sbjct 1769780 TGGCGGAGGTCTTGGGACAAATCCACTTCCTCCGCAGTCCAGAA 1769823 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521382164010400