Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sesamum_20indicum_20[refseq_20GCF_5F000512975.1_202014-01-06] 16,236 sequences; 275,059,498 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq8 161 9e-35 seq11 136 4e-27 seq6 131 2e-25 seq14 118 1e-21 >seq8 Length=21523998 Score = 161 bits (178), Expect = 9e-35 Identities = 174/228 (76%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 ||||||||||| || | || || || || ||||| || ||||| ||||| |||||||| Sbjct 16226429 CCGCCGCGTAGGCGGAGGACGAGGTGGAGGGTGCTTTCTTTCTGTATGTTGTAGTCGGAC 16226370 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 | ||||| ||||| || ||||||||||||||||||||||| || |||||||||| ||| Sbjct 16226369 AAAGTGCGTTCGTCTTCCAGCTGCTTGCCGGCGAATATCAGTCGTTGTTGGTCCGGAGGA 16226310 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTG-CTTCAACGACGACACAGTGTCGCTCGACTCCAC 41814 || | || ||| | | ||| |||| | ||||| |||||||| | |||||| Sbjct 16226309 AC-CCCTTCTTTTTCTTGAATTTTGGACTTCACATTTTCTACAGTGTCCGTACTCTCCAC 16226251 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||| ||||| ||||| || |||| ||||| ||||| |||||||| Sbjct 16226250 ATCCAGAGTTATGGTTTTTCCGGTCAAGGTCTTAACGAAGATCTGCAT 16226203 >seq11 Length=15446199 Score = 136 bits (150), Expect = 4e-27 Identities = 171/231 (74%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 ||||| || ||||| | || || || |||||| ||||||||| ||||| || |||| Sbjct 13441852 CCGCCTCGCAGACGGAGGACGAGGTGGAGCGTGGACTCCTTCTGGATGTTGTAATCGGCC 13441793 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 | ||| | |||| ||||||||||| |||||||| || |||||||| || |||| ||| Sbjct 13441792 AAGGTTCTGCCGTCTTCGAGCTGCTTCCCGGCGAAGATGAGGCGCTGCTGATCCGGCGGA 13441733 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTC---GCTCGACTC 41811 | | |||||||| | || | || || | ||| | | | ||||| ||| ||| Sbjct 13441732 ATTCCCTCCTTGT-CTTGGATCTTAGCCTTGACGTTGTCTATGGTGTCTGAGCT---CTC 13441677 Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||||||| ||| |||||||| || ||||| || || ||||| |||||||| Sbjct 13441676 CACCTCCAGCGTGATCGTTTTTCCGGTCAGAGTTTTCACGAAGATCTGCAT 13441626 Score = 129 bits (142), Expect = 5e-25 Identities = 167/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||||| || || || |||||| ||||||||| ||||| || |||| Sbjct 13441624 CCACCTCGCAGACGTAGGACGAGGTGGAGCGTGGACTCCTTCTGGATGTTGTAATCGGCC 13441565 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 | ||| | |||| ||||||||||| |||||||| || |||||||| || || | ||| Sbjct 13441564 AAGGTTCTGCCGTCTTCGAGCTGCTTCCCGGCGAAGATGAGGCGCTGCTGATCTGGCGGA 13441505 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | | |||||||| | || | || || | |||| | | |||||| ||| || Sbjct 13441504 ATTCCCTCCTTGT-CTTGGATCTTAGCCTTAACGTTATCTATCGTGTCGGAACTCTCAAC 13441446 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||| ||| |||||||| ||||| || || || || ||||||||||| Sbjct 13441445 CTCCAGCGTGATCGTTTTTCCCGTTAGGGTTTTCACAAAAATCTGCAT 13441398 Score = 120 bits (132), Expect = 3e-22 Identities = 159/217 (73%), Gaps = 8/217 (4%) Strand=Plus/Plus Query 41651 AACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCG 41710 |||||||| ||||| || |||||| ||||| |||||||| | |||||| | | || Sbjct 13253866 AACACCAGGTGCAGTGTCGACTCCTTTTGAATATTATAGTCAGCGAGGGTCCTGCCATCC 13253925 Query 41711 TCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCC 41770 ||||||||||| || || || |||| |||||||| || | ||||| | ||||| | | Sbjct 13253926 TCGAGCTGCTTACCAGCAAAAATCAAACGCTGTTGATCAGGGGGAATCCCTTCCTTAT-C 13253984 Query 41771 ATGATTTTTTGCTTCAACGACGAC-ACAGTGTC---GCTCGACTCCACCTCCACCGTTAT 41826 || |||| || | ||| | | | |||||| ||| ||| ||||||| ||||| Sbjct 13253985 TTGGATTTTGGCCTTAACATTGTCAATAGTGTCCGAGCT---CTCAACCTCCAATGTTAT 13254041 Query 41827 CGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 || || ||||||| ||||| || |||||||||||| Sbjct 13254042 GGTCTTCCCCGTCAAGGTCTTAACAAAAATCTGCATG 13254078 Score = 100 bits (110), Expect = 3e-16 Identities = 163/230 (71%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || ||||| || | | |||| ||||| || |||||||||||| ||||| |||| Sbjct 13442308 CCACCGCGCAGCCTCAGGACCAAATGCAAAGTCGACTCCTTCTGAATATTATAATCGGCC 13442249 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || || | | || || | ||||||||| ||||| ||||| | |||||| || | ||| Sbjct 13442248 AGAGTCCTTCCATCTTCCAACTGCTTGCCAGCGAAAATCAGCCTCTGTTGATCTGGTGGA 13442189 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGA---CTCC 41812 | | || |||||| ||| ||||||||| || | || | ||| | || ||| Sbjct 13442188 ATTCCTTCTTTGTCC-TGAATTTTTGCTTTTACATTGTCA-ATTGTATC-AGAGCTCTCA 13442132 Query 41813 ACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || |||| || || || || |||||||| || ||||| ||||||||||| Sbjct 13442131 ACTTCCAGGGTAATAGTCTTGCCCGTCAGGGTTTTTACAAAAATCTGCAT 13442082 Score = 100 bits (110), Expect = 3e-16 Identities = 162/231 (70%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || || || | || ||||| || || |||||||||||||||||| || | | Sbjct 13442536 CCACCACGAAGGCGGAGAACAAGATGAAGAGTCGACTCCTTCTGAATGTTATAATCAGCG 13442477 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || || | | | || || |||||||| || || || ||||| | ||| ||||| | || Sbjct 13442476 AGAGTTCTCCCATCCTCAAGCTGCTTACCAGCAAAGATCAGTCTCTGCTGGTCTGGTGGG 13442417 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACA-CAGTGTCGCTCGA---CTC 41811 | || ||||| ||| ||| ||| ||| ||| | || || | ||| ||| Sbjct 13442416 ATGCCTTCCTTATCCTGGATCTTTGCCTT----GACATTATCAATGGTGTCCGAACTCTC 13442361 Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||| |||| || || ||||| || |||| ||||| |||||||||||||| Sbjct 13442360 CACTTCCAGGGTGATGGTTTTTCCTGTCAATGTCTTCACGAAAATCTGCAT 13442310 Score = 95.1 bits (104), Expect = 1e-14 Identities = 167/236 (71%), Gaps = 7/236 (3%) Strand=Plus/Plus Query 41629 ATCACCGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATA 41688 |||||| || | | || || | |||| || || || ||| |||||| |||||||| || Sbjct 13253163 ATCACCACCTCGGAGTCGAAG-AACA--AGGTGAAGAGTGGACTCCTTTTGAATGTTGTA 13253219 Query 41689 GTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTC 41748 ||| | || ||||| |||| || ||||||||||| || || || || | |||||||| Sbjct 13253220 GTCTGCAAGCGTGCGACCGTCCTCAAGCTGCTTGCCAGCAAAGATGAGCCTTTGTTGGTC 13253279 Query 41749 CGCGGGAACGCTCTCCTTGTCCATGATTTTTTG-CTTCA-ACGACGACACAGTGTCGCTC 41806 | || | | |||||||| | ||| | || | ||||| | | | | ||| || Sbjct 13253280 TGGTGGGATACCCTCCTTGT-CTTGAATCTTGGCCTTCACATTATCA-ATAGTATCTGAA 13253337 Query 41807 GACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||||||||| || || ||||| || |||| ||||| || || |||||||| Sbjct 13253338 CTCTCCACCTCCAAGGTGATTGTTTTCCCTGTCAAAGTCTTGACAAAGATCTGCAT 13253393 Score = 91.5 bits (100), Expect = 1e-13 Identities = 106/143 (74%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || ||||| ||||| | || || || |||||| |||||||| ||||| || |||| Sbjct 13441396 CCACCGCGAAGACGGAGGACGAGGTGAAGCGTGGATTCCTTCTGGATGTTGTAATCGGCA 13441337 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 ||||| | |||| ||||||||||| |||||||| || || ||||| || |||| ||| Sbjct 13441336 AGGGTTCTGCCGTCCTCGAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGATCCGGAGGA 13441277 Query 41756 ACGCTCTCCTTGTCCATGATTTT 41778 | | ||||| ||| ||| || Sbjct 13441276 ATTCCTTCCTTATCCTGGATCTT 13441254 Score = 84.2 bits (92), Expect = 2e-11 Identities = 158/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || || || | ||| || || || || ||| ||||| || ||||| |||| Sbjct 11226199 CCACCACGAAGGCGGAGCACAAGGTGAAGAGTTGACTCTTTCTGGATATTATAATCGGCA 11226140 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || || || | || || |||||||| || || || || || || ||||| || | ||| Sbjct 11226139 AGTGTACGGCCATCCTCAAGCTGCTTCCCAGCAAAGATGAGCCGTTGTTGATCTGGTGGA 11226080 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTC--CA 41813 | | ||||||||| ||| | ||||| | || || | ||| || |||| || Sbjct 11226079 ATCCCCTCCTTGTCT-TGAATCTTTGCCTTCACATTATCA-ATTGTATCTGAACTCTCCA 11226022 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||||| || || ||||| || |||| ||||| || ||||| ||||| Sbjct 11226021 CCTCCAGAGTGATTGTTTTTCCAGTCAAGGTCTTAACAAAAATTTGCAT 11225973 >seq6 Length=25289714 Score = 131 bits (144), Expect = 2e-25 Identities = 148/196 (76%), Gaps = 2/196 (1%) Strand=Plus/Minus Query 41671 CTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 41730 ||||||||||||||| ||||||| ||| ||||| |||| ||||||||||| |||||||| Sbjct 179461 CTCCTTCTGAATGTTGTAGTCGGCGAGAGTGCGGCCGTCCTCGAGCTGCTTTCCGGCGAA 179402 Query 41731 TATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGA 41790 || |||||||| ||||||| || | || ||||||||| || | || || | ||| Sbjct 179401 GATGAGGCGCTGCTGGTCCGGAGGGATGCCTTCCTTGTCC-TGGATCTTGGCCTTGACGT 179343 Query 41791 CGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTA 41849 | | | || ||| || || ||||| | || || || |||||||| || || || | Sbjct 179342 TGTCAATGGTATCGGAGGATTCGACCTCAAGGGTAATGGTCTTACCCGTTAGGGTTTTGA 179283 Query 41850 CGAAAATCTGCATGTT 41865 |||| |||||||| || Sbjct 179282 CGAAGATCTGCATCTT 179267 Score = 125 bits (138), Expect = 7e-24 Identities = 169/233 (73%), Gaps = 2/233 (1%) Strand=Plus/Minus Query 41634 CGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGG 41693 |||| || || || || | || || || || ||| ||||||||| ||||| ||||| | Sbjct 19867629 CGCCTCCACGGAGTCGGAGGACTAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCG 19867570 Query 41694 AGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGG 41753 || ||||| | || |||||||| || |||||||| || || || || ||||||| || Sbjct 19867569 CAAGCGTGCGGCCATCCTCGAGCTGTTTCCCGGCGAAGATGAGACGTTGCTGGTCCGGGG 19867510 Query 41754 GAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCC 41812 | | || ||||| ||| ||| || ||| |||| | | | || ||| || || Sbjct 19867509 GGATGCCTTCCTTATCCTGGATCTTGGCCTT-AACGTTGTCGATGGTATCGGAGGATTCT 19867451 Query 41813 ACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865 ||||||| ||||| || || ||||| || ||||| |||||||||||||| || Sbjct 19867450 ACCTCCAAGGTTATGGTCTTGCCCGTAAGGGTCTTCACGAAAATCTGCATCTT 19867398 >seq14 Length=4882680 Score = 118 bits (130), Expect = 1e-21 Identities = 146/196 (74%), Gaps = 8/196 (4%) Strand=Plus/Plus Query 41671 CTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 41730 ||||||||||||||| ||||||| ||||||||| | || |||||||||||||| ||||| Sbjct 1411456 CTCCTTCTGAATGTTGTAGTCGGCGAGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAA 1411515 Query 41731 TATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGA 41790 ||||| | ||| ||||||| ||| | | ||||||||| || | || || | ||| Sbjct 1411516 GATCAGCCTCTGCTGGTCCGGGGGGATTCCTTCCTTGTCC-TGGATCTTGGCCTTGACGT 1411574 Query 41791 CGAC-ACAGTGTC---GCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCT 41846 | | | ||||| ||| |||||||| | || || || || || || || |||| Sbjct 1411575 TGTCGATGGTGTCAGAGCT---TTCCACCTCAAGGGTGATTGTCTTGCCGGTGAGGGTCT 1411631 Query 41847 TTACGAAAATCTGCAT 41862 | ||||| |||||||| Sbjct 1411632 TCACGAAGATCTGCAT 1411647 Score = 105 bits (116), Expect = 6e-18 Identities = 165/232 (71%), Gaps = 8/232 (3%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | ||||| ||| || ||| ||||||||| ||||| ||||| | Sbjct 1410965 CCACCACGGAGACGCAGCACCAAATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGCA 1411024 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || || ||| | || ||||| || || || ||||| || || | ||| ||||| | ||| Sbjct 1411025 AGTGTTCGCCCATCCTCGAGTTGTTTACCAGCGAAGATAAGCCTCTGCTGGTCTGGGGGG 1411084 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAG-TGTC---GCTCGACTC 41811 | || |||||||||| ||| || ||| | | | || | |||| |||| || Sbjct 1411085 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGA-CATTGTCAATGGTGTCAGAGCTC---TC 1411140 Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 || |||| || || || || || || || ||||| ||||||||||||||| Sbjct 1411141 GACTTCCAGGGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAAATCTGCATG 1411192 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462210175403200