Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Silene_20latifolia_20subsp._20alba_20[genbank_20GCA_5F001412135.1_20 2015-10-23] 307,720 sequences; 665,278,925 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq11074 163 4e-35 seq12130 125 1e-23 seq279023 122 1e-22 seq9218 122 1e-22 seq278817 118 2e-21 seq2831 118 2e-21 seq150073 114 2e-20 seq35076 114 2e-20 seq110967 113 7e-20 seq18381 109 8e-19 seq112514 105 1e-17 seq36261 102 1e-16 seq29279 100 4e-16 seq3774 100 4e-16 seq31228 95.1 2e-14 seq9871 89.7 8e-13 seq20614 84.2 3e-11 >seq11074 Length=8391 Score = 163 bits (180), Expect = 4e-35 Identities = 176/233 (76%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 |||||| ||||| | || || ||||| |||||||| ||||| |||| ||||| || Sbjct 480 AATGCAGATATTCGTGAAAACCCTAACTGGCAAAACAATAACCCTAGAAGTTGAATCATC 539 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 || ||||| ||| | ||| || || ||||| |||||||| || ||||||||||| Sbjct 540 AGACACAATCGACAATGTCAAAACCAAGATCCAAGACAAAGAAGGCATCCCACCTGATCA 599 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 |||| | ||||| ||||| || |||||| | || ||| |||| || |||| ||||| || Sbjct 600 ACAACGTCTTATCTTTGCTGGTAAACAACTTGAAGATGGTCGTACTTTAGCCGATTACAA 659 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTA 124770 ||| || |||||||| ||| | ||| | ||||||||| | || || |||| || Sbjct 660 TATCCAGAAAGAATCTACTCTTCATCTTGTTTTACGTCTTCGCGGCGGTACTA 712 >seq12130 Length=7920 Score = 125 bits (138), Expect = 1e-23 Identities = 168/231 (73%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA-AGCAAA 124597 |||||||||||| | ||||| || || ||||| || || ||| | ||| | || |||| Sbjct 5977 ATGCAAATATTTGTCAAGACCCTCACTGGCAAGACCATCACTTTGGAGGTCGAGAGCAGC 5918 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 || |||||| ||| | || || || ||||| || || || || || || ||||| Sbjct 5917 -GACACAATTGACAATGTCAAGACTAAGATCCAAGACAAGGAGGGAATTCCCCCAGATCA 5859 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 |||||||||||||| || ||||| || | || ||| |||| || | | || || || Sbjct 5858 GCAAAGGCTTATTTTCGCTGGAAAGCAGCTCGAAGATGGTCGCACCCTCGCTGACTACAA 5799 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 ||| || || || |||||| | |||||||| || ||| | |||||||||| Sbjct 5798 TATCCAGAAGGAGTCAACTCTCCATTTGGTGTTGCGTCTCAGAGGTGGTAT 5748 Score = 98.7 bits (108), Expect = 1e-15 Identities = 162/231 (70%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA-AGCAAA 124597 |||||||| || | ||||| || || ||||| || || ||| | ||| | || |||| Sbjct 1191 ATGCAAATTTTCGTCAAGACCCTCACTGGCAAGACCATCACTTTGGAGGTCGAGAGCAGC 1132 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 || |||||| ||| | || || ||||||||||| || || || || || || || Sbjct 1131 -GACACAATTGACAATGTCAAGACTAAGATTCAAGATAAGGAGGGAATTCCCCCAGACCA 1073 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 || || |||||||| || || || || | || || |||| || | | ||| || || Sbjct 1072 GCAGAGACTTATTTTCGCTGGCAAGCAGCTTGAAGACGGTCGCACCCTTGCAGACTACAA 1013 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 ||| || || || || || |||| |||||| | ||| | || |||||||| Sbjct 1012 TATCCAGAAGGAGTCTACCCTGCACTTGGTTCTCCGTCTGCGTGGTGGTAT 962 >seq279023 Length=610 Score = 122 bits (134), Expect = 1e-22 Identities = 168/230 (73%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA-AGCAAA 124597 |||||||| || | || || || || || || ||||| || |||| | || ||| Sbjct 171 ATGCAAATTTTCGTGAAAACCCTTACCGGGAAGACTATTACCCTAGAAGTGGAGAGCTC- 229 Query 124598 TGATACAATTTCTAAT-TTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATC 124656 |||||| ||| ||| |||| ||| || || || ||||| ||||| || ||||| |||| Sbjct 230 TGATACTATTGACAATGTTAAGACA-AAGATACAGGATAAGGAAGGGATCCCACCAGATC 288 Query 124657 AACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATA 124716 | |||||| | || |||||||| || || || |||||| | || || |||| || || | Sbjct 289 AGCAAAGGTTGATCTTTGCAGGGAAGCAGTTGGAGGATGGCCGCACTTTAGCTGACTACA 348 Query 124717 ATATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGT 124766 |||||||||| |||||||| | || | ||| | ||| | || |||||| Sbjct 349 ATATTCAAAAGGAATCAACCCTCCACCTTGTTCTTCGTCTTCGTGGTGGT 398 >seq9218 Length=18002 Score = 122 bits (134), Expect = 1e-22 Identities = 167/231 (72%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA-AGCAAA 124597 ||||| |||||| | ||||| | || || || || || ||| | ||| | || ||| Sbjct 15113 ATGCAGATATTTGTTAAGACTTTGACCGGGAAGACCATCACTTTGGAGGTGGAGAGCTC- 15055 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 |||||| ||| ||| | || ||||||||||||||| ||||| || || || ||||| Sbjct 15054 TGATACTATTGACAATGTCAAGACGAAAATTCAAGATAAGGAAGGGATTCCCCCAGATCA 14995 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 || || | || ||||| || |||||||| || || | || || ||| ||||| || Sbjct 14994 GCAGAGATTGATCTTTGCCGGGAAACAATTGGAAGACGGGCGTACCCTAGCTGATTACAA 14935 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 |||||| || || || ||| | |||||||| | ||||| | |||||||| Sbjct 14934 TATTCAGAAGGAGTCGACTCTCCATTTGGTGCTTCGTTTGAGGGGTGGTAT 14884 Score = 104 bits (114), Expect = 4e-17 Identities = 163/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| || || | ||||| ||||| || |||||||| || | || | ||| Sbjct 14885 ATGCAGATTTTCGTCAAGACTCTAACTGGGAAAACTATTACCCTGGAAGTCGAAAGCTCG 14826 Query 124599 GATACAATTTCTAATTTAAA-ACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 || || ||| ||| | || ||| || || || ||||||||||| || || || ||||| Sbjct 14825 GACACCATTGACAATGTGAAGACA-AAGATCCAGGATAAAGAAGGGATTCCTCCAGATCA 14767 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 || || | || ||||| ||||||||||| || || | || || ||| ||||| || Sbjct 14766 GCAGAGATTGATCTTTGCCGGAAAACAATTGGAAGACGGGCGTACCCTAGCTGATTACAA 14707 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 |||||| || || || ||| | |||||||| | ||| | | |||||||| Sbjct 14706 TATTCAGAAGGAGTCGACTCTCCATTTGGTGCTCCGTCTCAGGGGTGGTAT 14656 >seq278817 Length=610 Score = 118 bits (130), Expect = 2e-21 Identities = 165/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| || | || || || || || || ||||| || |||| | || | Sbjct 440 ATGCAAATTTTCGTGAAAACCCTTACCGGGAAGACTATTACCCTAGAAGTGGAGAGTTCT 381 Query 124599 GATACAATTTCTAAT-TTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 ||||| ||| ||| |||| ||| || || || ||||| ||||| || ||||| ||||| Sbjct 380 GATACTATTGACAATGTTAAGACA-AAGATACAGGATAAGGAAGGGATCCCACCAGATCA 322 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 |||||| | || |||||||| || || || |||||| | || || |||| || || || Sbjct 321 GCAAAGGTTGATCTTTGCAGGGAAGCAGTTGGAGGATGGGCGCACTTTAGCTGACTACAA 262 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGT 124766 ||||||||| |||||||| | || | ||| | ||| | || |||||| Sbjct 261 TATTCAAAAGGAATCAACCCTCCACCTTGTTCTTCGTCTTCGTGGTGGT 213 >seq2831 Length=23904 Score = 118 bits (130), Expect = 2e-21 Identities = 165/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA-AGCAAA 124597 ||||| || ||| | |||||| | || ||||| || || || | ||| | || ||| Sbjct 5664 ATGCAGATCTTTGTGAAGACATTGACCGGCAAGACCATCACCTTGGAGGTGGAGAGCTCC 5723 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 || || ||| |||| | || ||| || ||||| || |||||||| || || ||||| Sbjct 5724 -GACACCATTGATAATGTGAAGACGAAGATACAAGACAAGGAAGGTATTCCTCCAGATCA 5782 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 || ||||| || ||||||||||| ||||| || ||| | || || || | ||||| || Sbjct 5783 GCAGAGGCTGATATTTGCAGGAAAGCAATTGGAAGATGGGCGTACCTTGGCTGATTACAA 5842 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGT 124766 ||||||||| ||||| ||| | ||| | || | ||| | || || ||| Sbjct 5843 TATTCAAAAGGAATCCACTCTTCATCTTGTCCTTCGTCTTCGTGGCGGT 5891 >seq150073 Length=1124 Score = 114 bits (126), Expect = 2e-20 Identities = 167/231 (72%), Gaps = 4/231 (2%) Strand=Plus/Plus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA-AGCAA 124596 ||||||||| ||| | || || | || || |||||||| || |||| | || ||| Sbjct 57 AATGCAAATTTTTGTGAAAACCTTGACTGGGAAAACTATCACCTTAGAAGTGGAGAGCTC 116 Query 124597 ATGATACAATTTCTAATTTAAA-ACAGAAAATTCAAGATAAAGAAGGTATACCACCTGAT 124655 |||||| || |||| | || ||| || || || ||||| ||||| || || || ||| Sbjct 117 -TGATACTATCGATAATGTCAAGACA-AAGATACAGGATAAGGAAGGGATCCCGCCAGAT 174 Query 124656 CAACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTAT 124715 || |||||| | || ||||||||||| || || |||||| | || || || | || ||| Sbjct 175 CAGCAAAGGTTGATCTTTGCAGGAAAGCAGTTGGAGGATGGCCGCACCTTGGCTGACTAT 234 Query 124716 AATATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGT 124766 ||||||||||| ||||| || | || | || | ||| | || |||||| Sbjct 235 AATATTCAAAAGGAATCGACCCTCCACCTTGTCCTTCGTCTCCGTGGTGGT 285 >seq35076 Length=3390 Score = 114 bits (126), Expect = 2e-20 Identities = 150/205 (73%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| ||| | ||||| || |||||||| || || ||| | ||| | || | Sbjct 2073 ATGCAAATCTTTGTCAAGACCCTTACAGGCAAGACCATTACTCTCGAGGTCGAGAGTTCT 2014 Query 124599 GATACAATTTCTAAT-TTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 |||||||| ||| ||||||| |||||||| || || || || || || || || || Sbjct 2013 GATACAATCGACAATGTTAAAACC-AAAATTCAGGACAAGGAGGGCATTCCTCCAGACCA 1955 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 |||||||| || |||||||| || || | ||||| | |||||| | | ||||| || Sbjct 1954 GCAAAGGCTGATCTTTGCAGGCAAGCAGCTTGAGGACGGCCGAACACTCGCTGATTACAA 1895 Query 124718 TATTCAAAAAGAATCAACTTTGCAT 124742 ||||||||||| || ||| | ||| Sbjct 1894 CATTCAAAAAGAGTCCACTCTCCAT 1870 Score = 93.3 bits (102), Expect = 6e-14 Identities = 159/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 |||||| || ||| | ||||| || || |||||||| || ||| | ||| | || Sbjct 1846 AATGCAGATCTTTGTCAAGACCCTTACTGGCAAAACCATTACTCTTGAGGTCGAGAGTTC 1787 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 ||| || ||| || | ||| || ||||| || || || || || ||||| || || Sbjct 1786 TGACACCATTGACAACGTCAAAACTAAGATTCAGGACAAGGAGGGCATCCCACCAGACCA 1727 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 ||||||||||| ||||| || || || || |||||| | || || || | || ||||| Sbjct 1726 GCAAAGGCTTATCTTTGCCGGTAAGCAGTTGGAGGATGGACGTACTTTGGCCGACTATAA 1667 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 || || || || ||||| | ||| | || | ||| | | || ||||| Sbjct 1666 CATACAGAAGGAGTCAACCCTCCATCTTGTCCTGCGTCTGAGGGGAGGTAT 1616 >seq110967 Length=1286 Score = 113 bits (124), Expect = 7e-20 Identities = 167/237 (70%), Gaps = 0/237 (0%) Strand=Plus/Minus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 |||||| || || | || || |||||||| || || ||||| ||||| | ||| | Sbjct 879 AATGCAGATCTTCGTGAAAACCCTAACAGGGAAGACGATAACCCTAGAGGTAGAATCCTC 820 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 ||||| || |||| | ||| ||| || ||||| || ||||| |||||||| || || Sbjct 819 AGATACGATCGATAATGTGAAAACGAAGATCCAAGACAAGGAAGGAATACCACCAGACCA 760 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 |||| | || || ||||||||||| || | || ||| || | || |||| ||| || || Sbjct 759 ACAACGACTGATATTTGCAGGAAAGCAGCTTGAAGATGGTAGGACCTTAGCAGAGTACAA 700 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAA 124774 || || || || ||||| | || | || |||| | || |||||| ||| || Sbjct 699 CATCCAGAAGGAGTCAACACTTCACCTAGTCCTACGACTTCGTGGTGGTGCTAAGAA 643 >seq18381 Length=6025 Score = 109 bits (120), Expect = 8e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| || | ||||| ||||| ||||| || || ||| | ||| |||| Sbjct 2300 ATGCAAATCTTCGTCAAGACCCTAACTGGCAAGACCATTACTCTCGAGGTTGAGAGTTCC 2241 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || || ||| ||| | ||| || ||||| || || ||||| || || || || || Sbjct 2240 GACACCATTGACAATGTCAAAACCAAGATTCAGGACAAGGAAGGCATTCCTCCAGACCAG 2181 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 |||||||| || ||||| || || ||| | |||||| | ||||| | | ||||| ||| Sbjct 2180 CAAAGGCTGATCTTTGCTGGGAAGCAACTTGAGGATGGCCGAACCCTTGCTGATTACAAT 2121 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 |||||||| || || || | |||||||| | ||| | |||| || || Sbjct 2120 ATTCAAAAGGAGTCCACCCTCCATTTGGTGCTCCGTCTCAGAGGAGGGAT 2071 >seq112514 Length=1387 Score = 105 bits (116), Expect = 1e-17 Identities = 138/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 |||||| ||||| | || || |||| || ||||| || || |||| ||||| | | Sbjct 613 AATGCAGATATTCGTGAAAACCTTAACTGGTAAAACCATTACCTTAGAAGTTGAATCTAG 554 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 |||||| || |||| | ||| || |||||||||||||||||||| || || || || Sbjct 553 TGATACTATAGATAATGTCAAAACTAAGATTCAAGATAAAGAAGGTATTCCTCCGGACCA 494 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 |||| | | ||||| || || || || || || ||| |||| || | | || || || Sbjct 493 ACAACGTTTGATTTTCGCCGGTAAGCAGTTGGAAGATGGTCGTACGCTTGCCGACTACAA 434 Query 124718 TATTCAAAAAG 124728 |||||||||| Sbjct 433 CATTCAAAAAG 423 >seq36261 Length=3302 Score = 102 bits (112), Expect = 1e-16 Identities = 145/199 (73%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA-AGCAAA 124597 ||||| || || | ||||| || || || || || || ||| ||||| | || ||| Sbjct 2583 ATGCAGATTTTCGTGAAGACCCTTACCGGGAAGACAATCACTTTAGAGGTGGAGAGCTCG 2642 Query 124598 TGATACAATTTCTAATTTAAA-ACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATC 124656 ||||| ||| |||| | || ||| || || || || || ||||| || ||||| |||| Sbjct 2643 -GATACTATTGATAATGTCAAGACA-AAGATACAGGACAAGGAAGGGATCCCACCAGATC 2700 Query 124657 AACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATA 124716 | |||||| | || |||||||| || || || |||||| | || || || | || || | Sbjct 2701 AGCAAAGGTTGATCTTTGCAGGGAAGCAGTTGGAGGATGGCCGCACCTTGGCTGACTACA 2760 Query 124717 ATATTCAAAAAGAATCAAC 124735 |||||||||| ||||| || Sbjct 2761 ATATTCAAAAGGAATCCAC 2779 >seq29279 Length=3900 Score = 100 bits (110), Expect = 4e-16 Identities = 163/231 (71%), Gaps = 3/231 (1%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA-AGCAAA 124597 ||||| || ||| ||||||| || || || || || ||||| | || |||| ||| | Sbjct 2345 ATGCAGATTTTTGTAAAGACCCTTACCGGGAAGACCATAACCCTTGAAGTTGAGAGCTCA 2286 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 || || ||| ||| | || |||||| || || || ||||| || || || ||| | Sbjct 2285 -GACACTATTGACAATGTGAAGACGAAAATCCAGGACAAGGAAGGCATTCCCCCAGATTA 2227 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 || ||| | ||||| || ||||| || || ||||||||||| || | | || || || Sbjct 2226 GCAGAGGTTGATTTT-GCTGGAAAGCAGTTGGAGGATAGTCGGACCCTTGCTGACTACAA 2168 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 ||||| || || || || | |||||||| | ||| || |||| ||||| Sbjct 2167 CATTCAGAAGGAGTCCACCCTCCATTTGGTGCTTCGTCTAAGAGGCGGTAT 2117 >seq3774 Length=25925 Score = 100 bits (110), Expect = 4e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| ||| | ||||| || || ||||||||||| ||| | ||| | || | Sbjct 7910 ATGCAAATCTTTGTCAAGACTCTTACTGGCAAAACTATCACTCTCGAGGTCGAGAGTTCT 7969 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || || || ||| | ||| |||||||| || || ||| | || || || || || Sbjct 7970 GACACCATCGACAATGTCAAAACCAAAATTCAGGACAAGGAATGAATCCCCCCAGACCAG 8029 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 |||||||| || ||||| ||||| ||| | |||||| |||| || | | ||||| || Sbjct 8030 CAAAGGCTGATCTTTGCTGGAAAGCAACTCGAGGATGGTCGTACCCTTGCTGATTACAAC 8089 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 || || || || || || | ||||| || | ||| || | || || || Sbjct 8090 ATCCAGAAGGAGTCTACCCTCCATTTAGTGCTCCGTCTAAGGGGAGGGAT 8139 Score = 95.1 bits (104), Expect = 2e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| || ||||||| || || || || || || ||| | ||| |||| Sbjct 7682 ATGCAAATCTTCGTAAAGACCCTTACTGGGAAGACCATTACTCTGGAGGTTGAGAGTTCC 7741 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || || ||| ||| | ||| || ||||| || || || || || || || || || Sbjct 7742 GACACCATTGACAATGTCAAAACCAAGATTCAGGACAAGGAGGGCATTCCTCCAGACCAG 7801 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 |||||||| || ||||| ||||| ||| | |||||| | || || | | |||||| ||| Sbjct 7802 CAAAGGCTGATCTTTGCTGGAAAGCAACTTGAGGATGGCCGCACCCTTGCAGATTACAAT 7861 Query 124719 ATTCAAAAAGAATCAAC 124735 |||||||| || || || Sbjct 7862 ATTCAAAAGGAGTCCAC 7878 Score = 89.7 bits (98), Expect = 8e-13 Identities = 140/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| || || | ||||| || || || || || || || | || |||| | Sbjct 8138 ATGCAGATTTTCGTGAAGACCCTTACCGGGAAGACCATCACCCTGGAAGTTGAGAGTTCT 8197 Query 124599 GATACAATTTCTAAT-TTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 || || ||| ||| |||| || ||||| || || |||||||| || ||||| ||||| Sbjct 8198 GACACCATTGACAATGTTAAGACC-AAAATCCAGGACAAAGAAGGAATCCCACCAGATCA 8256 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 || ||| | || |||||||| || || || |||||| | || || || | || || || Sbjct 8257 GCAGAGGTTGATCTTTGCAGGGAAGCAGTTGGAGGATGGGCGCACCTTGGCTGACTACAA 8316 Query 124718 TATTCAAAAAGAATCAAC 124735 ||||||||| ||||| || Sbjct 8317 TATTCAAAAGGAATCCAC 8334 >seq31228 Length=3734 Score = 95.1 bits (104), Expect = 2e-14 Identities = 99/129 (77%), Gaps = 1/129 (1%) Strand=Plus/Minus Query 124614 TTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAACAAAGGCTTATTTTT 124673 ||||||| || ||||| ||||| ||||| || ||||| ||||| ||||||||||| ||| Sbjct 3699 TTAAAACT-AAGATTCAGGATAAGGAAGGCATCCCACCGGATCAGCAAAGGCTTATCTTT 3641 Query 124674 GCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAATATTCAAAAAGAATCA 124733 || || || || | |||||| | || || || | |||||||| ||||| || || || Sbjct 3640 GCCGGTAAGCAGCTGGAGGATGGCCGCACTTTGGCCGATTATAACATTCAGAAGGAGTCT 3581 Query 124734 ACTTTGCAT 124742 || ||||| Sbjct 3580 ACCCTGCAT 3572 >seq9871 Length=9033 Score = 89.7 bits (98), Expect = 8e-13 Identities = 140/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA-AGCAAA 124597 ||||| || || | |||||| | || || || ||||| || | ||| | || |||| Sbjct 463 ATGCAGATCTTCGTCAAGACATTGACTGGGAAGACTATCACCTTGGAGGTGGAGAGCAGC 404 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 || || ||| ||| | || ||| || || || || ||||| || || || ||||| Sbjct 403 -GACACGATTGACAATGTGAAGACGAAGATCCAGGACAAGGAAGGAATCCCTCCGGATCA 345 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 || ||| | || ||||| || ||||| || |||||| | || || || | |||||||| Sbjct 344 GCAGAGGTTGATCTTTGCTGGGAAACAGTTGGAGGATGGGCGCACTTTGGCTGATTATAA 285 Query 124718 TATTCAAAAAGAATCAAC 124735 |||||| || ||||| || Sbjct 284 TATTCAGAAGGAATCTAC 267 >seq20614 Length=5371 Score = 84.2 bits (92), Expect = 3e-11 Identities = 139/198 (70%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA-AGCAAA 124597 |||||||||||| | ||||| || || ||||| || || ||| | ||| | || || | Sbjct 2091 ATGCAAATATTTGTCAAGACCCTTACCGGCAAGACCATTACTCTCGAGGTCGAGAGTTCA 2150 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 || || ||| ||| | || || ||||| || || || || || || || ||||| Sbjct 2151 -GACACCATTGACAATGTCAAGACTAAGATTCAGGACAAGGAGGGCATTCCTCCAGATCA 2209 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 || || || || ||||||||||| || | || ||| | || || | | ||||||||| Sbjct 2210 GCAGAGACTGATCTTTGCAGGAAAGCAGCTTGAAGATGGCCGCACTCTTGCAGATTATAA 2269 Query 124718 TATTCAAAAAGAATCAAC 124735 || ||||| || || || Sbjct 2270 CATCCAAAAGGAGTCTAC 2287 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 752550138496000