Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Silene_20latifolia_20subsp._20alba_20[genbank_20GCA_5F001412135.1_20 2015-10-23] 307,720 sequences; 665,278,925 total letters Query= NC_002642.1 Length=144575 Score E Sequences producing significant alignments: (Bits) Value seq2381 102 8e-17 >seq2381 Length=21385 Score = 102 bits (112), Expect = 8e-17 Identities = 116/156 (74%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 16234 ACAAGCAAAATCACAATGCAATCCTTCGTCCCTACTTATTAACTCGTTTGAAAATGTAAG 16293 ||| || ||||| ||||| | |||||||| | | ||||||||||| || || || || Sbjct 13972 ACATGCGAAATCGCAATGAAGCCCTTCGTCTCGAGAAATTAACTCGTTAGAGAAGGTTAG 14031 Query 16294 ACCTGGCATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATGAACCAGAAAAGAA 16353 || ||||||| || || ||||| | ||| ||||||||| || ||||| ||||| Sbjct 14032 TCCAGGCATTAAACCACGCTTTTTCAGCCAGAATATAGCGCAGAAGCTTCCAGAGAAGAA 14091 Query 16354 TATACCTTCAACTGCGGCAAATGCAACCAATCGCTC 16389 ||| |||||||| |||||||||| | |||||| Sbjct 14092 TATCCCTTCAACACAAGCAAATGCAATTATTCGCTC 14127 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 460732947592000