Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Silene_20latifolia_20subsp._20alba_20[genbank_20GCA_5F001412135.1_20 2015-10-23] 307,720 sequences; 665,278,925 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq33024 149 6e-31 seq100015 109 5e-19 seq60406 107 2e-18 seq9871 107 2e-18 seq11074 105 6e-18 seq10696 105 6e-18 seq35076 96.9 3e-15 seq2831 96.9 3e-15 seq51823 93.3 4e-14 seq29279 89.7 5e-13 seq16687 89.7 5e-13 seq9218 89.7 5e-13 seq150073 86.0 6e-12 seq110967 86.0 6e-12 seq36261 86.0 6e-12 seq6474 82.4 7e-11 >seq33024 Length=3557 Score = 149 bits (164), Expect = 6e-31 Identities = 570/886 (64%), Gaps = 32/886 (4%) Strand=Plus/Minus Query 57545 CATGTTTCCGATTGAATATCCAGACATTTGGAACATGTACAAAAAGGCAGAAGCATCGTT 57604 |||||| || || ||| || | || ||| | ||||||||||| || ||||| || || Sbjct 1898 CATGTTCCCAATCAAATTCCCCCAAATCTGGGAAATGTACAAAAAAGCCGAAGCTTCTTT 1839 Query 57605 TTGGACCGTCGAAGAAGTAGACCTGTCTAAGGATCTGAGCGATTGG---GATTCCCTCAA 57661 ||||| | |||||||| || | ||| ||| | | | ||| || | || | Sbjct 1838 CTGGACTGCTGAAGAAGTCGATTTATCTTCCGATTTACGTCACTGGTCCGACACTCTGAC 1779 Query 57662 AGAATCTGAGAGAAATTTTATTAAACACGTGTTGGCGTTTTTCGCCGCATCCGATGGTAT 57721 ||| | |||| || | |||||| | || || ||||||||||| || ||||| Sbjct 1778 GTCCGATGAACGTCATTTCATCACTCACGTGCTCGCCTTCTTCGCCGCATCTGACGGTAT 1719 Query 57722 TGTTAACGAGAATTTGG----TCGAAAGATTTTCACAA--GAAGTGCAAGTGACGGAGGC 57775 ||| |||||| | | ||| ||||| | ||||| ||| | | || || Sbjct 1718 TGTGCTGGAGAATCTCGCTTGTCG------TTTCATGAAGGAAGTTCAACTTCCTGAAGC 1665 Query 57776 GAGATGCTTTTACGGATTTCAAGTGGCCATTGAAAACGTGCATTCAGAAATGTATTCGCT 57835 |||| |||||||| |||||| | || || ||||| | ||||| |||||||| || | Sbjct 1664 GAGAGCATTTTACGGGTTTCAAATCGCTATCGAAAATATCCATTCCGAAATGTACTCCTT 1605 Query 57836 ACTCATCGATACGTACGTGAAGGACAACGACGAGAAACGTAGACTGTTCAACGCGATCGA 57895 | | | || || ||| | ||||| || || ||| | | ||| || | || Sbjct 1604 ATTATTGGAGACTTACATTAAGGATTCGGAGGAAAAATCGGGTTTATTCCGTGCTGTTGA 1545 Query 57896 AACAATGCCCGCGATCGCCAAG---AAGGCAGAGTGGTCAATCAAATGGATAAAAAGCGC 57952 || || ||||| || ||| ||||| || ||| | | ||||| | ||| Sbjct 1544 GACTATCCCCGCTGTC---AAGCGCAAGGCTGATTGGGCCTTGCGCTGGATCGACGGCGG 1488 Query 57953 CACGGCCACGTTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTC 58012 || | ||||| ||| | | |||| ||||| || ||||| |||||||| || Sbjct 1487 ---GGAGAGTTTCGCTGAGCGAATTGTCGCTTTCGCTTGTGTTGAAGGGATATTCTTCTC 1431 Query 58013 GGGCAGCTT-TGCGGCAATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGT 58071 || ||||| |||| | ||||||||| | |||||||| || | ||||| || || || | Sbjct 1430 TGGAAGCTTCTGCG-CGATATTTTGGCTCAAGAAACGAGGATTAATGCCGGGGCTTACCT 1372 Query 58072 TTAGCAACGAGTTGATATCGCGCGACGAGGGTCTCCATACTGATTTTGCGTGCCTAATGT 58131 | ||||||||||| || || |||||||| | || |||||| || || | ||| Sbjct 1371 TCTCGAACGAGTTGATTTCTCGAGACGAGGGGTTACACTGTGATTTCGCCTGTTTGTTGT 1312 Query 58132 ACTCTCACATTGTCAATAAACCGACGCGGGATCGCATCTTGGACATTATCACCGAGGCGG 58191 |||| | | |||||| ||| ||| ||| | || ||| | | ||||||| Sbjct 1311 ACTCGCTGTTGAACAATAAGGCGAGTGAGGAGCGCGTGAAGGGGATTGTTTCAGAGGCGG 1252 Query 58192 TCGCGATCGAAAATGAGTTTGTCACCGAAGCCCTACCGGTGGCCATGCTCGGTATGAACA 58251 | | ||||| | |||||||| || || || || || || | || ||||| Sbjct 1251 TGGAAATCGAGAGGGAGTTTGTTTGTGACGCGCTGCCTTGCGCGTTGGTTGGGATGAATG 1192 Query 58252 ATGATTTGATGTCAAAGTACATTGAGTTTGTTGCCGACAGACTTTTGCTCG---AACTGA 58308 || || ||| |||| ||||| |||||||| || || | ||| | | || Sbjct 1191 GAGAGTTAATGAGTCAGTATATTGAATTTGTTGCTGATAGGTTGTTGGGTGCTTTAGGGA 1132 Query 58309 TTGGAGAGCGTCATTACAACACGAAAAATCCGTTTGATTTTATGAATCTGATCTCGCTCG 58368 |||| || || |||| ||||||||||||| ||| | |||| || | Sbjct 1131 TTGG-GAAAGT--TTACGGAGTTTCGAATCCGTTTGATTGGATGGAATTGATTTCTTTGC 1075 Query 58369 AGGGCAAGACAAACTTTTTCGaaaaaaaaGTTAGCGAATATCAAAA 58414 |||| ||||| || ||||||||||| ||| | || ||||| || Sbjct 1074 AGGGAAAGACTAATTTTTTCGAAAAGCGGGTTGGGGAGTATCAGAA 1029 >seq100015 Length=1511 Score = 109 bits (120), Expect = 5e-19 Identities = 301/456 (66%), Gaps = 8/456 (2%) Strand=Plus/Minus Query 57963 TTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTT- 58021 ||||| ||| | | |||| ||||| || ||||| |||||||| || || ||||| Sbjct 1388 TTCGCTGAGCGAATTGTCGCTTTCGCTTGTGTTGAAGGGATATTCTTCTCTGGAAGCTTC 1329 Query 58022 TGCGGCAATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGA 58081 |||| | ||||||||| | |||||||| || | ||||| || || || || ||||| Sbjct 1328 TGCG-CGATATTTTGGCTCAAGAAACGAGGGTTAATGCCAGGGCTTACCTTCTCGAACGA 1270 Query 58082 GTTGATATCGCGCGACGAGGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACAT 58141 |||||| || || |||||||| | || ||| || || || | ||||||| | | Sbjct 1269 GTTGATTTCTCGAGACGAGGGATTACACTGTGACTTCGCCTGTTTGTTGTACTCGCTGTT 1210 Query 58142 TGTCAATAAACCGACGCGGGATCGCATCTTGGACATTATCACCGAGGCGGTCGCGATCGA 58201 |||||| ||| ||| ||| | || ||| | | ||||| || | || || Sbjct 1209 GAACAATAAGGCGAGTGAGGAGCGCGTGAAGGGGATTGTTTCGGAGGCAGTGGAAATTGA 1150 Query 58202 AAATGAGTTTGTCACCGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGAT 58261 | |||||||| || || || || || || | || ||||| || ||||| Sbjct 1149 GAGGGAGTTTGTTTGTGACGCGCTGCCTTGCGCGTTGGTTGGGATGAATGGAGAGTTGAT 1090 Query 58262 GTCAAAGTACATTGAGTTTGTTGCCGACAGACTTTTGCTCG---AACTGATTGGAGAGCG 58318 | |||| |||||||||||||| || || | ||| | | |||||| || | Sbjct 1089 GAGTCAGTATATTGAGTTTGTTGCTGATAGGTTGTTGGGTGCTTTAGGGATTGG-GAAAG 1031 Query 58319 TCATTACAACACGAAAAATCCGTTTGATTTTATGAATCTGATCTCGCTCGAGGGCAAGAC 58378 | |||| ||||||||||||| ||| | |||| ||| | |||| ||||| Sbjct 1030 T--TTACGGAGTTTCGAATCCGTTTGATTGGATGGAATTGATTTCGTTGCAGGGGAAGAC 973 Query 58379 AAACTTTTTCGaaaaaaaaGTTAGCGAATATCAAAA 58414 || ||||||||||| ||| | || ||||| || Sbjct 972 TAATTTTTTCGAAAAGCGGGTTGGGGAGTATCAGAA 937 >seq60406 Length=2202 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| || || || || || || ||||| || || || | || || || ||| Sbjct 1556 ATGCAAATCTTTGTGAAAACCCTAACTGGCAAGACAATTACTCTGGAGGTCGAGAGTTCC 1497 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | || | |||||| | ||| ||||||||| ||| | || || |||||| Sbjct 1496 GACACCATTGACAATGTCAAAACCAAAATTCAGGACAAGGAGGGCATTCCTCCAGACCAG 1437 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||| | || || ||||| ||||| || | || || ||| || ||||||||| Sbjct 1436 CAGAGGCTGATCTTCGCAGGCAAGCAACTTGAGGATGGCCGAACTCTGGCTGATTATAAC 1377 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 ||||| ||||| |||||||||||||| || ||| | ||||||| || Sbjct 1376 ATTCAGAAAGAGTCGACTCTTCATCTTGTGCTTCGGTTGAGGGGAGG 1330 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| ||||| || || || |||| || || || || ||| |||| ||||| || Sbjct 1329 CATGCAGATTTTTGTGAAAACCTTGACTGGAAAGACCATTACCCTCGAGGTTGAGAGCTC 1270 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 || | | | || | |||||| | ||| ||| |||||||| | || || || || Sbjct 1269 TGATACTATTGACAATGTCAAAACTAAAATTCAGGATAAGGAAGGTATCCCCCCAGATCA 1210 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||| | || || || ||||| || ||| | || ||| ||| || |||||||| Sbjct 1209 GCAGAGGCTTATCTTTGCTGGTAAGCAGCTTGAGGACGGCCGTACTTTGGCTGATTATAA 1150 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 ||| || || || ||||| || ||| |||| || | ||||||| || Sbjct 1149 CATCCAGAAGGAGTCGACCCTCCATTTGGTGCTCCGTTTGAGGGGAGG 1102 >seq9871 Length=9033 Score = 107 bits (118), Expect = 2e-18 Identities = 161/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| ||||| ||||||||||| || || || || || |||| || || ||| Sbjct 1147 ATGCAAATCTTCGTTAAGACTCTGACCGGAAAGACAATTACTCTCGAGGTCGAGAGCTCC 1088 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | |||||| | ||| || |||||||| | || || |||||| Sbjct 1087 GACACAATCGACAATGTCAAAACCAAAATCCAAGATAAGGAAGGGATTCCCCCAGACCAG 1028 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || ||| | || |||||||| ||||| | |||||| ||| | ||| || ||| Sbjct 1027 CAACGTTTGATCTTCGCTGGTAAACAACTCGAAGACGGCCGAACTCTCGCCGACTACAAC 968 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 || ||||| || || ||||| ||||| || || | ||| | || |||| Sbjct 967 ATCCAAAAGGAGTCCACTCTCCATCTTGTCCTCCGCCTGCGTGGTGGTA 919 >seq11074 Length=8391 Score = 105 bits (116), Expect = 6e-18 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 31189 AAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACC 31248 ||| ||||| || ||||| || || || || |||||||| || ||| | || |||||| | Sbjct 477 AAAAATGCAGATATTCGTGAAAACCCTAACTGGCAAAACAATAACCCTAGAAGTTGAATC 536 Query 31249 GTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGA 31308 || |||| |||| | |||||| | || ||||| |||||| | || || || Sbjct 537 ATCAGACACAATCGACAATGTCAAAACCAAGATCCAAGACAAAGAAGGCATCCCACCTGA 596 Query 31309 CCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTA 31368 || || ||||| || || ||||| ||||| | ||||| | ||| | |||||| Sbjct 597 TCAACAACGTCTTATCTTTGCTGGTAAACAACTTGAAGATGGTCGTACTTTAGCCGATTA 656 Query 31369 TAACATTCAAAAAGAATCGACTCTTCATCTGGT 31401 || || || |||||||| ||||||||||| || Sbjct 657 CAATATCCAGAAAGAATCTACTCTTCATCTTGT 689 >seq10696 Length=13777 Score = 105 bits (116), Expect = 6e-18 Identities = 167/238 (70%), Gaps = 1/238 (0%) Strand=Plus/Minus Query 31185 AATCAAA-CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTT 31243 ||||||| |||||| || ||| | || | || || || ||||| |||||| | || || Sbjct 6552 AATCAAAACATGCAGATCTTCATGAAAAACCTAACCGGAAAAACAATCACCCTTGAAGTG 6493 Query 31244 GAACCGTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCG 31303 ||| | || |||| |||| || ||||| | ||| ||||| || ||| | || Sbjct 6492 GAATCATCAGACACAATCGACACCCTCAAATCCAAAATCCACGACAAAGAGGGCATCCCA 6433 Query 31304 CCCGACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGC 31363 | || || || || ||||| ||||| || |||||| | ||||| ||| || || Sbjct 6432 TCTGATCAACAACGCCTAATCTTCGCAGGAAAACAGCTTGAAGATGGCCGCACTCTGGGC 6373 Query 31364 GATTATAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||||| ||||| || || || || ||||||||||| || ||| | || | ||||||| Sbjct 6372 GATTACAACATCCAGAAGGAGTCCACTCTTCATCTTGTTCTTCGCCTTCGTGGCGGTA 6315 >seq35076 Length=3390 Score = 96.9 bits (106), Expect = 3e-15 Identities = 161/230 (70%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| || || ||||| || |||||||| || || || |||| || || || Sbjct 2073 ATGCAAATCTTTGTCAAGACCCTTACAGGCAAGACCATTACTCTCGAGGTCGAGAGTTCT 2014 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | |||| | || ||| | ||| ||||||||| ||| | || || |||||| Sbjct 2013 GATACAATCGACAATGTTAAAACCAAAATTCAGGACAAGGAGGGCATTCCTCCAGACCAG 1954 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACT--CTATGACTATGAGC-GATTAT 31369 || | || || || || ||||| ||| | || ||| | | ||| || ||||| Sbjct 1953 CAAAGGCTGATCTTTGCAGGCAAGCAGCTTGAGGACGGCCGAACACTC---GCTGATTAC 1897 Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 |||||||||||||| || ||||| ||||| || || | |||||||| || Sbjct 1896 AACATTCAAAAAGAGTCCACTCTCCATCTTGTCCTCCGTCTGAGGGGAGG 1847 Score = 89.7 bits (98), Expect = 5e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| |||||||| || ||||| || || || || |||||| | || ||||| || Sbjct 1389 ATGCAGATTTTCGTGAAAACTCTTACCGGGAAGACCATCACCCTGGAAGTTGAGAGTTCG 1330 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||||| | || || || ||| |||||||||||| | || || || ||| Sbjct 1329 GACACTGTCGATAATGTTAAGACGAAAATCCAGGACAAGGAAGGGATCCCTCCAGATCAG 1270 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||| | | || || || || || |||||||| || ||| || || ||||| Sbjct 1269 CAGAGGTTGATCTTTGCAGGGAAGCAGTTGGAGGATGGGCGCACTTTGGCTGACTATAAT 1210 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||||| || ||||| || || || || || || Sbjct 1209 ATTCAGAAGGAATCCACGCTCCACCTTGTCCT 1178 >seq2831 Length=23904 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || || || ||||| |||| ||||| || |||||| | || || || ||| Sbjct 5664 ATGCAGATCTTTGTGAAGACATTGACCGGCAAGACCATCACCTTGGAGGTGGAGAGCTCC 5723 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | || | || || || ||| ||||||||||| | || || || ||| Sbjct 5724 GACACCATTGATAATGTGAAGACGAAGATACAAGACAAGGAAGGTATTCCTCCAGATCAG 5783 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||| | || ||||| || || || || |||||||| || || ||||| || Sbjct 5784 CAGAGGCTGATATTTGCAGGAAAGCAATTGGAAGATGGGCGTACCTTGGCTGATTACAAT 5843 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT 31420 |||||||| ||||| ||||||||||| || ||| | || | |||||| Sbjct 5844 ATTCAAAAGGAATCCACTCTTCATCTTGTCCTTCGTCTTCGTGGCGGT 5891 Score = 86.0 bits (94), Expect = 6e-12 Identities = 149/214 (70%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||| ||||| || || ||||| || || ||| | || || || || Sbjct 5207 CATGCAGATCTTCGTGAAGACCCTAACTGGCAAGACCATTACCCTTGAGGTCGAGAGTTC 5266 Query 31252 CGACAGTGTCGAAACGGTCAA-ACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACC 31310 ||||| | || | ||||| || ||| | |||||||| || | || || |||| Sbjct 5267 CGACACCATTGACAACGTCAAGACCAAGA-TCCAAGACAAGGAGGGAATCCCCCCAGACC 5325 Query 31311 AGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATA 31370 ||||| | || || ||||| || || ||| | |||||| | || | ||||||| Sbjct 5326 AGCAGAGGCTTATTTTCGCCGGAAAGCAGCTAGAAGACGGTCGTACCCTTGCTGATTATA 5385 Query 31371 ACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 |||| || || || |||||||| ||||| || || Sbjct 5386 ACATCCAGAAGGAGTCGACTCTCCATCTTGTCCT 5419 >seq51823 Length=2487 Score = 93.3 bits (102), Expect = 4e-14 Identities = 151/214 (71%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| ||||| || ||||| |||| |||||||| |||||| | || || || ||| Sbjct 1345 ATGCAGATTTTTGTCAAGACCTTGACCGGCAAAACAATCACCCTTGAGGTCGAGAGTTCC 1404 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | || | ||||| | ||| ||||||||| || | || || |||||| Sbjct 1405 GACACCATTGACAACGTCAAGACTAAAATCCAGGACAAGGAGGGAATTCCCCCAGACCAG 1464 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGAC--TCTATGACTATGAGCGATTATA 31370 ||| | || || ||||||||||| ||| | |||||| | | ||| | | || || | Sbjct 1465 CAGAGGCTTATTTTCGCTGGCAAGCAGCTAGAAGACGGCCGAACACT-CGCG-GACTACA 1522 Query 31371 ACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 |||| || || || || ||||| ||||| || || Sbjct 1523 ACATCCAGAAGGAGTCCACTCTCCATCTTGTCCT 1556 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| || || ||||| |||| ||||| || |||||| |||| ||||| ||| Sbjct 1573 ATGCAAATCTTTGTCAAGACCTTGACCGGCAAGACTATCACCCTCGAGGTTGAGAGTTCC 1632 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | | || | ||||| | ||| |||||||||||| | || || |||||| Sbjct 1633 GATACCATTGACAATGTCAAGACCAAAATCCAGGACAAGGAAGGAATTCCCCCAGACCAG 1692 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||| | | || || ||||| || ||| | || ||| || | ||| || ||| Sbjct 1693 CAGAGATTGATCTTTGCTGGAAAGCAGCTTGAGGACGGGCGCACCCTTGCCGACTACAAC 1752 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 |||||||| || || ||||| ||| |||| | | || ||||| || Sbjct 1753 ATTCAAAAGGAGTCAACTCTCCATTTGGTGTTGCGTCTCAGGGGTGG 1799 >seq29279 Length=3900 Score = 89.7 bits (98), Expect = 5e-13 Identities = 158/229 (69%), Gaps = 1/229 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| ||||| |||||||| || || || || || || ||| | || ||||| || Sbjct 2345 ATGCAGATTTTTGTAAAGACCCTTACCGGGAAGACCATAACCCTTGAAGTTGAGAGCTCA 2286 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | | || | || || || ||| ||||||||||||| | || || || || Sbjct 2285 GACACTATTGACAATGTGAAGACGAAAATCCAGGACAAGGAAGGCATTCCCCCAGATTAG 2226 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||| | | || || ||||| || |||||||| || | ||| | || || ||| Sbjct 2225 CAGAGGTTGAT-TTTGCTGGAAAGCAGTTGGAGGATAGTCGGACCCTTGCTGACTACAAC 2167 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||||| || || || || || ||| |||| ||| | || || ||||||| Sbjct 2166 ATTCAGAAGGAGTCCACCCTCCATTTGGTGCTTCGTCTAAGAGGCGGTA 2118 >seq16687 Length=6431 Score = 89.7 bits (98), Expect = 5e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| |||||||| ||||| || || || || || || ||| | || ||||| || Sbjct 1396 ATGCAGATTTTCGTGAAGACGCTTACCGGAAAGACCATTACCCTTGAAGTTGAGAGCTCG 1337 Query 31253 GACAGTGTCGAAACGGTCAA-ACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| | || | ||||| || ||| | ||||||||||||| | || || ||||| Sbjct 1336 GACACCATTGACAATGTCAAGACCAAGATTCA-GGACAAGGAAGGCATTCCCCCAGACCA 1278 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||| | || || || ||||| || ||| | || ||| ||| || |||||||| Sbjct 1277 GCAAAGACTGATCTTTGCTGGTAAGCAGCTTGAGGACGGCCGCACTTTGGCTGATTATAA 1218 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 ||| || || || || || || ||| |||| || | || ||||| || Sbjct 1217 CATCCAGAAGGAGTCCACCCTCCATTTGGTGCTCCGTCTCAGGGGAGG 1170 >seq9218 Length=18002 Score = 89.7 bits (98), Expect = 5e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| ||||| ||||| || || ||||| || || || |||| || || ||| Sbjct 15569 ATGCAAATCTTCGTTAAGACCCTAACCGGCAAGACAATTACTCTCGAGGTCGAGAGTTCC 15510 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | || | |||||| | || ||| ||||| || | || || |||||| Sbjct 15509 GACACCATTGACAATGTCAAAACTAAGATTCAGGATAAGGAGGGTATTCCTCCAGACCAG 15450 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || | || || || || || |||||| | || ||| | ||| | || |||||| Sbjct 15449 CAAAGACTTATCTTTGCAGGGAAACAGCTAGAGGACGGTCGTACTCTCGCTGACTATAAC 15390 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||||| || || || |||||||| |||| ||| | ||| | || |||| Sbjct 15389 ATTCAGAAGGAGTCTACTCTTCACTTGGTTCTTCGTCTGCGTGGTGGTA 15341 >seq150073 Length=1124 Score = 86.0 bits (94), Expect = 6e-12 Identities = 149/214 (70%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||||||||| || || || |||| || ||||| |||||| | || || || || Sbjct 58 ATGCAAATTTTTGTGAAAACCTTGACTGGGAAAACTATCACCTTAGAAGTGGAGAGCTCT 117 Query 31253 GACAGTGTCGAAACGGTCAA-ACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 || | | |||| | ||||| ||| || ||| ||| |||||||| | ||||| || || Sbjct 118 GATACTATCGATAATGTCAAGACAAAG-ATACAGGATAAGGAAGGGATCCCGCCAGATCA 176 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||| | | || || || || || |||||||| || || || || ||||| Sbjct 177 GCAAAGGTTGATCTTTGCAGGAAAGCAGTTGGAGGATGGCCGCACCTTGGCTGACTATAA 236 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTT 31405 |||||||| |||||||| || || || || ||| Sbjct 237 TATTCAAAAGGAATCGACCCTCCACCTTGTCCTT 270 >seq110967 Length=1286 Score = 86.0 bits (94), Expect = 6e-12 Identities = 167/244 (68%), Gaps = 6/244 (2%) Strand=Plus/Minus Query 31189 AAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACC 31248 ||| ||||| || ||||| || || || ||||| || ||||| ||| | || || ||| | Sbjct 882 AAAAATGCAGATCTTCGTGAAAACCCTAACAGGGAAGACGATAACCCTAGAGGTAGAATC 823 Query 31249 GTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGA 31308 || || | |||| | || ||| || || ||||||||||| | || || || Sbjct 822 CTCAGATACGATCGATAATGTGAAAACGAAGATCCAAGACAAGGAAGGAATACCACCAGA 763 Query 31309 CCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGC-GATT 31367 ||| || || || ||||| || || || ||| | ||||| || ||| | ||| || | Sbjct 762 CCAACAACGACTGATATTTGCAGGAAAGCAGCTTGAAGATGGTAGGAC-CTTAGCAGAGT 704 Query 31368 ATAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT----AGA 31423 | ||||| || || || || || ||||| || || || |||| | || ||| ||| Sbjct 703 ACAACATCCAGAAGGAGTCAACACTTCACCTAGTCCTACGACTTCGTGGTGGTGCTAAGA 644 Query 31424 AGCG 31427 |||| Sbjct 643 AGCG 640 >seq36261 Length=3302 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| ||||| ||||| || || ||||| || || || |||| ||||| ||| Sbjct 2355 ATGCAAATCTTCGTCAAGACCCTAACTGGCAAGACCATTACTCTCGAGGTTGAGAGTTCC 2414 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | || | |||||| | || ||||||||| ||| | || || |||||| Sbjct 2415 GACACCATTGACAATGTCAAAACCAAGATTCAGGACAAGGAGGGCATTCCTCCAGACCAG 2474 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || | || || || || ||||| ||| |||| || || | ||||||||| Sbjct 2475 CAAAGACTGATCTTTGCAGGCAAGCAGCTGGAGGATGGCCGAACCCTTGCTGATTATAAC 2534 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 || || || || || || || ||| |||| || | || ||||| || Sbjct 2535 ATCCAGAAGGAGTCCACCCTCCATTTGGTGCTCCGTCTAAGGGGAGG 2581 >seq6474 Length=11706 Score = 82.4 bits (90), Expect = 7e-11 Identities = 113/157 (72%), Gaps = 1/157 (1%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| ||||| || ||||| || | || || ||||| | || || || || Sbjct 4693 ATGCAAATCTTCGTCAAAACTCTAACTGAAAAGACAATCACTCTTGAGGTCGAGAGTTCT 4634 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCC-GACCA 31311 |||| |||| | |||||| | || |||||||| || | || ||| ||||| Sbjct 4633 GACACAATCGACAATGTCAAAACTAAGATCCAAGACAAGGAGGGGATTCCCCCCAGACCA 4574 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGAC 31348 ||||||||||||||| ||||| |||||| | |||||| Sbjct 4573 GCAGCGTCTAATATTTGCTGGAAAACAGCTTGAAGAC 4537 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 444051759542400