Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Silene_20latifolia_20subsp._20alba_20[genbank_20GCA_5F001412135.1_20 2015-10-23] 307,720 sequences; 665,278,925 total letters Query= NC_019929.1 Length=243050 Score E Sequences producing significant alignments: (Bits) Value seq1 87.8 3e-12 >seq1 Length=146306 Score = 87.8 bits (96), Expect = 3e-12 Identities = 65/75 (87%), Gaps = 1/75 (1%) Strand=Plus/Plus Query 169725 TTAGGATTGTAGCTCAGTTGGTCTAGAGTGCCGCCCTGTCACGGCGGAGGTCGCGGGTTC 169784 || ||||||||| ||| ||||| ||||| ||||||||||| |||||| | |||||||| Sbjct 60531 TTGGGATTGTAGTTCAATTGGT-TAGAGCACCGCCCTGTCAAGGCGGAAGCTGCGGGTTC 60589 Query 169785 GAGCCCCGTCAGTCC 169799 ||||||||||||||| Sbjct 60590 GAGCCCCGTCAGTCC 60604 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 774640838512000