Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Silene_20latifolia_20subsp._20alba_20[genbank_20GCA_5F001412135.1_20 2015-10-23] 307,720 sequences; 665,278,925 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq11074 168 1e-36 seq112514 158 2e-33 seq110967 131 3e-25 seq9218 131 3e-25 seq8115 118 2e-21 seq59535 109 1e-18 seq29279 109 1e-18 seq12130 109 1e-18 seq60406 107 3e-18 seq9871 96.9 6e-15 seq20614 95.1 2e-14 seq2675 95.1 2e-14 seq18408 89.7 9e-13 seq3724 89.7 9e-13 seq35076 87.8 3e-12 seq18381 86.0 1e-11 >seq11074 Length=8391 Score = 168 bits (186), Expect = 1e-36 Identities = 182/241 (76%), Gaps = 0/241 (0%) Strand=Plus/Minus Query 171835 TCATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTAT 171894 ||||| |||| || | ||| ||||| || | ||| | ||||| ||||| ||||| | Sbjct 715 TCATAGTACCGCCGCGAAGACGTAAAACAAGATGAAGAGTAGATTCTTTCTGGATATTGT 656 Query 171895 AATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGT 171954 |||| | ||||| || | || || | ||||||||||||||| || | | ||||| | Sbjct 655 AATCGGCTAAAGTACGACCATCTTCAAGTTGTTTACCAGCAAAGATAAGACGTTGTTGAT 596 Query 171955 CAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACG 172014 ||||||| || |||||||| ||||| || || |||| ||||| || || ||||| | Sbjct 595 CAGGTGGGATGCCTTCTTTGTCTTGGATCTTGGTTTTGACATTGTCGATTGTGTCTGATG 536 Query 172015 ATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTTAT 172074 |||| |||||||| || || ||||| ||||||| ||||| | ||||||||||||||| | Sbjct 535 ATTCAACTTCTAGGGTTATTGTTTTGCCAGTTAGGGTTTTCACGAATATCTGCATTTTTT 476 Query 172075 T 172075 | Sbjct 475 T 475 >seq112514 Length=1387 Score = 158 bits (174), Expect = 2e-33 Identities = 132/162 (81%), Gaps = 0/162 (0%) Strand=Plus/Plus Query 171915 TCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTA 171974 || ||||| || ||||| || ||||| || | |||||||| || || || ||||||||| Sbjct 458 TCTTCCAACTGCTTACCGGCGAAAATCAAACGTTGTTGGTCCGGAGGAATACCTTCTTTA 517 Query 171975 TCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATG 172034 ||||| || ||| |||| |||||| ||||||||| ||||| ||||||| |||||| Sbjct 518 TCTTGAATCTTAGTTTTGACATTATCTATAGTATCACTAGATTCAACTTCTAAGGTAATG 577 Query 172035 GTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTTATTA 172076 |||||||||||||| ||||| | ||||||||||||||| ||| Sbjct 578 GTTTTACCAGTTAAGGTTTTCACGAATATCTGCATTTTTTTA 619 >seq110967 Length=1286 Score = 131 bits (144), Expect = 3e-25 Identities = 179/249 (72%), Gaps = 1/249 (0%) Strand=Plus/Plus Query 171825 CTTTTTA-GTTTCATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTT 171883 ||| ||| | ||| || |||||| | |||||||| |||| || | || | ||| || Sbjct 633 CTTCTTACGCTTCTTAGCACCACCACGAAGTCGTAGGACTAGGTGAAGTGTTGACTCCTT 692 Query 171884 AGAAATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAA 171943 || || || |||| ||| | | | || || | || || || ||||| || | Sbjct 693 CTGGATGTTGTACTCTGCTAAGGTCCTACCATCTTCAAGCTGCTTTCCTGCAAATATCAG 752 Query 171944 TCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTAT 172003 || |||||||| |||||||||||||| || ||||| || || |||| |||||| || Sbjct 753 TCGTTGTTGGTCTGGTGGTATTCCTTCCTTGTCTTGGATCTTCGTTTTCACATTATCGAT 812 Query 172004 AGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATAT 172063 |||||||| |||||||| ||||| || || || || || |||| ||||| | ||| || Sbjct 813 CGTATCTGAGGATTCTACCTCTAGGGTTATCGTCTTCCCTGTTAGGGTTTTCACGAAGAT 872 Query 172064 CTGCATTTT 172072 ||||||||| Sbjct 873 CTGCATTTT 881 >seq9218 Length=18002 Score = 131 bits (144), Expect = 3e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 |||||||| || || || | || ||||| | ||| | ||| || |||||| ||||| Sbjct 14656 ATACCACCCCTGAGACGGAGCACCAAATGGAGAGTCGACTCCTTCTGAATATTGTAATCA 14715 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 | || | || |||| ||||||||||| || ||||| || |||||||| || || || Sbjct 14716 GCTAGGGTACGCCCGTCTTCCAATTGTTTTCCGGCAAAGATCAATCTCTGCTGATCTGGA 14775 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || ||||||||||| || || || | || ||||| || || || || ||| Sbjct 14776 GGAATCCCTTCTTTATCCTGGATCTTTGTCTTCACATTGTCAATGGTGTCCGAGCTTTCG 14835 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||||| || ||||| ||||| ||||||| || || | ||| |||||||| Sbjct 14836 ACTTCCAGGGTAATAGTTTTCCCAGTTAGAGTCTTGACGAAAATCTGCAT 14885 Score = 127 bits (140), Expect = 4e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 |||||||| || | || | || ||||| | ||| | ||| || |||||| ||||| Sbjct 14884 ATACCACCCCTCAAACGAAGCACCAAATGGAGAGTCGACTCCTTCTGAATATTGTAATCA 14943 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 | || | || |||| ||||||||||| || ||||| || |||||||| || || || Sbjct 14944 GCTAGGGTACGCCCGTCTTCCAATTGTTTCCCGGCAAAGATCAATCTCTGCTGATCTGGG 15003 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || ||||| |||||||| ||||| | || ||||| |||||||| || || Sbjct 15004 GGAATCCCTTCCTTATCTTGAATTTTCGTCTTGACATTGTCAATAGTATCAGAGCTCTCC 15063 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 || || | ||| ||||| || || || || || |||| ||||||||||| Sbjct 15064 ACCTCCAAAGTGATGGTCTTCCCGGTCAAAGTCTTAACAAATATCTGCAT 15113 Score = 122 bits (134), Expect = 2e-22 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 |||||||| | || || | || || || | ||||| ||| || ||| ||||| || Sbjct 15112 ATACCACCGCGTAGACGGAGGACCAAGTGAAGAGTAGACTCCTTCTGAATGTTATAGTCA 15171 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 | |||| || | || || | |||||| |||||||| || ||||| || ||||| || Sbjct 15172 GCCAAAGTACGACCATCCTCGAGTTGTTTTCCAGCAAAGATCAATCTTTGCTGGTCTGGA 15231 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || || || ||||| || || ||| | ||||||||| || || ||||| ||| Sbjct 15232 GGAATACCCTCCTTATCCTGAATCTTAGTCTTTACATTATCAATGGTGTCTGAACTTTCG 15291 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 || || | ||||||||| || ||||| || || || | ||||||||||| Sbjct 15292 ACCTCCAAAGTAATGGTCTTTCCAGTCAAAGTCTTGACAAATATCTGCAT 15341 Score = 96.9 bits (106), Expect = 6e-15 Identities = 131/183 (72%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 171887 AATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCT 171946 |||||| ||||| | |||| || | || ||||| || || || ||||| || || || Sbjct 14475 AATATTGTAATCAGCCAAAGTGCGCCCATCCTCCAACTGCTTCCCTGCAAAGATCAACCT 14534 Query 171947 CTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGT 172006 ||| || || || || || || ||||| || || || ||| | || |||||| ||||| Sbjct 14535 CTGCTGATCTGGGGGAATGCCCTCTTTGTCCTGGATCTTAGTCTTCACATTATCAATAGT 14594 Query 172007 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTG 172066 ||| || || ||||| | || || || || || |||||||| || | |||||||| Sbjct 14595 ATCAGAGCTCTCGACTTCCAAGGTGATCGTCTTCCCCGTTAATGTCTTGACAAATATCTG 14654 Query 172067 CAT 172069 ||| Sbjct 14655 CAT 14657 >seq8115 Length=10241 Score = 118 bits (130), Expect = 2e-21 Identities = 122/160 (76%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 171913 CGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTT 171972 |||| || | |||||| || || || || | | ||||||||| ||||| |||||||||| Sbjct 7339 CGTCTTCGAGTTGTTTTCCGGCGAAGATGAGACGCTGTTGGTCTGGTGGGATTCCTTCTT 7398 Query 171973 TATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAA 172032 | ||||| || || |||| ||||| || || ||||| ||||| || || || || | Sbjct 7399 TGTCTTGGATCTTGGTTTTGACATTGTCGATTGTGTCTGAGGATTCAACCTCAAGGGTGA 7458 Query 172033 TGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072 | ||||| ||||||| ||||| | ||| ||||||||||| Sbjct 7459 TTGTTTTCCCAGTTAGGGTTTTCACGAAGATCTGCATTTT 7498 >seq59535 Length=2228 Score = 109 bits (120), Expect = 1e-18 Identities = 119/158 (75%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 171915 TCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTA 171974 || || | |||||| || || || |||| | |||||||| ||||| ||||||||||| Sbjct 1597 TCTTCGAGTTGTTTTCCGGCGAAGATTAGACGTTGTTGGTCTGGTGGGATTCCTTCTTTG 1656 Query 171975 TCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATG 172034 ||||| ||||| |||| ||||| || || || || ||||| || || || || || Sbjct 1657 TCTTGGATTTTGGTTTTGACATTGTCGATTGTGTCGGAGGATTCAACCTCGAGGGTGATT 1716 Query 172035 GTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072 ||||| || |||| ||||| | ||| ||||||||||| Sbjct 1717 GTTTTGCCGGTTAGGGTTTTTACGAAGATCTGCATTTT 1754 >seq29279 Length=3900 Score = 109 bits (120), Expect = 1e-18 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 || || ||||| || || | || |||| | || | ||| || || ||||||||| Sbjct 2344 ATCCCTCCTCTCAGACGGAGCACCAAATAGAGGGTGGACTCCTTCTGGATGTTATAATCT 2403 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 | |||| || |||| |||| || ||||||||||| |||| || || || || || Sbjct 2404 GCCAAAGTGCGGCCGTCCTCCAGCTGCTTACCAGCAAAGATTAGCCTTTGATGATCTGGG 2463 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || || |||||||| || || ||| | || |||||| || ||||| || || Sbjct 2464 GGGATGCCCTCTTTATCCTGAATCTTAGTCTTGACATTATCAATGGTATCAGAGCTCTCA 2523 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 || | || |||||||| || ||||| || ||||| | ||| |||||||| Sbjct 2524 ACCACGAGGGTAATGGTCTTTCCAGTCAAGGTTTTCACGAAAATCTGCAT 2573 >seq12130 Length=7920 Score = 109 bits (120), Expect = 1e-18 Identities = 136/184 (74%), Gaps = 2/184 (1%) Strand=Plus/Plus Query 171887 AATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCT 171946 |||||| ||||| | |||| || | || ||||| ||||| ||||||||||| || || Sbjct 5339 AATATTGTAATCCGCCAAAGTGCGCCCATCCTCCAACTGTTTCCCAGCAAAAATCAACCT 5398 Query 171947 CTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGT 172006 ||| || || ||||| |||||||| ||||| || || || | || |||||| ||||| Sbjct 5399 CTGCTGATCTGGTGGGATTCCTTCCTTATCCTGGATCTTCGTCTTGACATTATCGATAGT 5458 Query 172007 ATCTGACGAT-TCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCT 172065 || | | | || || |||| || ||||| || ||||| ||||| || | || |||| Sbjct 5459 GTC-GCTGCTCTCCACCTCTAAGGTGATGGTCTTGCCAGTCAATGTCTTGACAAAGATCT 5517 Query 172066 GCAT 172069 |||| Sbjct 5518 GCAT 5521 Score = 98.7 bits (108), Expect = 2e-15 Identities = 122/167 (73%), Gaps = 0/167 (0%) Strand=Plus/Plus Query 171915 TCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTA 171974 || || | ||||||||||||||| || || | || ||||| || || ||||| ||||| Sbjct 1265 TCTTCAAGTTGTTTACCAGCAAAGATCAAACGTTGCTGGTCTGGGGGAATTCCCTCTTTG 1324 Query 171975 TCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATG 172034 ||||| || || |||| |||||| || || || || || || || ||||| ||| Sbjct 1325 TCTTGAATCTTTGTTTTGACATTATCGATTGTGTCGGAGCTCTCAACCTCGAGAGTGATG 1384 Query 172035 GTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTTATTATAAAA 172081 || ||||| || || || |||| ||| || ||||| | || || ||| Sbjct 1385 GTCTTACCGGTCAAAGTCTTAACGAAGATTTGCATCTGATCATTAAA 1431 Score = 91.5 bits (100), Expect = 3e-13 Identities = 132/184 (72%), Gaps = 2/184 (1%) Strand=Plus/Plus Query 171887 AATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCT 171946 |||||| ||||| | ||||| || | || ||||||||||| |||||||| || || || Sbjct 553 AATATTGTAATCAGCTAAAGTGCGCCCATCCTCCAATTGTTTCCCAGCAAAGATCAACCT 612 Query 171947 CTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGT 172006 ||| || || ||||| || || || || || || || || | || |||||| || || Sbjct 613 CTGCTGATCTGGTGGGATCCCCTCCTTGTCCTGGATCTTCGTCTTCACATTATCAATGGT 672 Query 172007 ATCTGACGAT-TCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCT 172065 || | | | || || || | || || || || ||||| ||||| || | ||| |||| Sbjct 673 GTC-GCTGCTCTCCACCTCCAAGGTGATAGTCTTCCCAGTCAATGTCTTGACGAAGATCT 731 Query 172066 GCAT 172069 |||| Sbjct 732 GCAT 735 >seq60406 Length=2202 Score = 107 bits (118), Expect = 3e-18 Identities = 133/182 (73%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 171888 ATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTC 171947 || |||||||| | |||| || |||| || | || ||||||||||| || | ||| Sbjct 1147 ATGTTATAATCAGCCAAAGTACGGCCGTCCTCAAGCTGCTTACCAGCAAAGATAAGCCTC 1206 Query 171948 TGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTA 172007 || || || || || || ||||| ||||| || |||||| |||| ||||| |||||| Sbjct 1207 TGCTGATCTGGGGGGATACCTTCCTTATCCTGAATTTTAGTTTTGACATTGTCAATAGTA 1266 Query 172008 TCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGC 172067 || || || || || || |||||||| || ||||| || ||||| | || |||||| Sbjct 1267 TCAGAGCTCTCAACCTCGAGGGTAATGGTCTTTCCAGTCAAGGTTTTCACAAAAATCTGC 1326 Query 172068 AT 172069 || Sbjct 1327 AT 1328 >seq9871 Length=9033 Score = 96.9 bits (106), Expect = 6e-15 Identities = 167/243 (69%), Gaps = 0/243 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 |||||||| | || || | || | ||| | ||| | ||| || || || || || Sbjct 918 ATACCACCACGCAGGCGGAGGACAAGATGGAGAGTGGACTCCTTTTGGATGTTGTAGTCG 977 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 | | || ||| |||| || | |||||||||||| || || || | || ||||| || Sbjct 978 GCGAGAGTTCGGCCGTCTTCGAGTTGTTTACCAGCGAAGATCAAACGTTGCTGGTCTGGG 1037 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || ||||| |||||||| ||||| |||| ||||| || || || || || Sbjct 1038 GGAATCCCTTCCTTATCTTGGATTTTGGTTTTGACATTGTCGATTGTGTCGGAGCTCTCG 1097 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTTATTATAA 172079 || || |||||||| || || || || | || |||| ||| || ||||| | || ||| Sbjct 1098 ACCTCGAGAGTAATTGTCTTTCCGGTCAGAGTCTTAACGAAGATTTGCATCTGATCATAC 1157 Query 172080 AAA 172082 ||| Sbjct 1158 AAA 1160 Score = 86.0 bits (94), Expect = 1e-11 Identities = 131/184 (71%), Gaps = 2/184 (1%) Strand=Plus/Plus Query 171887 AATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCT 171946 |||||||||||| | |||| || | || ||||| ||||| |||||||| || || || Sbjct 281 AATATTATAATCAGCCAAAGTGCGCCCATCCTCCAACTGTTTCCCAGCAAAGATCAACCT 340 Query 171947 CTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGT 172006 ||| || || || || |||||||| || || || || || | || ||||| || || Sbjct 341 CTGCTGATCCGGAGGGATTCCTTCCTTGTCCTGGATCTTCGTCTTCACATTGTCAATCGT 400 Query 172007 ATCTGACGAT-TCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCT 172065 || | | | || || || | || || || || ||||| ||||| || | ||| |||| Sbjct 401 GTC-GCTGCTCTCCACCTCCAAGGTGATAGTCTTCCCAGTCAATGTCTTGACGAAGATCT 459 Query 172066 GCAT 172069 |||| Sbjct 460 GCAT 463 >seq20614 Length=5371 Score = 95.1 bits (104), Expect = 2e-14 Identities = 130/182 (71%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 171888 ATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTC 171947 ||||| || || | |||| || | || ||||| || || || ||||| || || ||| Sbjct 2500 ATATTGTAGTCGGCCAAAGTGCGCCCATCCTCCAACTGCTTCCCTGCAAAGATCAACCTC 2441 Query 171948 TGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTA 172007 || || || ||||| || ||||| || || ||||| ||| |||| ||||| || || Sbjct 2440 TGCTGATCTGGTGGGATCCCTTCCTTGTCCTGTATCTTAGTTTTGACATTGTCAATGGTG 2381 Query 172008 TCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGC 172067 ||||| || || |||||||||||||| || ||||| | || || | || || ||| Sbjct 2380 TCTGAACTCTCGACCTCTAGAGTAATGGTCTTGCCAGTAAGAGTCTTGACAAAGATTTGC 2321 Query 172068 AT 172069 || Sbjct 2320 AT 2319 >seq2675 Length=17436 Score = 95.1 bits (104), Expect = 2e-14 Identities = 132/185 (71%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 171888 ATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTC 171947 || || || |||| || || ||| || || || | ||| || || ||||| |||| | Sbjct 15533 ATGTTGTAGTCTGCTACAGTTCGGTCATCTTCAAGTTGCTTGCCGGCAAATATTAGACGT 15474 Query 171948 TGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTA 172007 |||||||||||||| || || ||||| || || ||||| || | || | || | Sbjct 15473 TGTTGGTCAGGTGGGATGCCCTCTTTGTCCTGGATTTTGGACTTAATGTTGTTGATTGAG 15414 Query 172008 TCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGC 172067 || || | ||| ||||| | || || || || || ||||| ||||||| |||||||||| Sbjct 15413 TCAGATGGTTCGACTTCCATGGTTATCGTCTTGCCGGTTAAGGTTTTAACGAATATCTGC 15354 Query 172068 ATTTT 172072 || || Sbjct 15353 ATCTT 15349 >seq18408 Length=6019 Score = 89.7 bits (98), Expect = 9e-13 Identities = 159/232 (69%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 171841 TACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTG 171900 ||||||| | ||| |||| || | || | ||| | ||| || || || || |||| Sbjct 650 TACCACCGCGAAGGCGTAGCACGAGGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCTG 709 Query 171901 ATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTG 171960 || | |||||| || || | ||| || || ||||| || | | || ||||| |||| Sbjct 710 CTACGGTTCGTTCATCTTCAAGTTGCTTGCCGGCAAATATAAGGCGTTGCTGGTCGGGTG 769 Query 171961 GTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTA 172020 | || || ||||| || || ||||| || | || | || | || || | ||| | Sbjct 770 GGATGCCCTCTTTGTCCTGGATTTTGGACTTAATGTTGTTGATTGAGTCAGATGGTTCAA 829 Query 172021 CTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072 |||| | || || || || || ||||||||||| | |||||||||||| || Sbjct 830 CTTCCATGGTTATTGTCTTGCCGGTTAATGTTTTCACGAATATCTGCATCTT 881 >seq3724 Length=15214 Score = 89.7 bits (98), Expect = 9e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 171841 TACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTG 171900 ||||||| | ||| |||| || | || | ||| | ||| || ||||| || |||| Sbjct 4247 TACCACCGCGAAGGCGTAGGACGAGGTGGAGAGTGGACTCCTTCTGGATATTGTAGTCTG 4306 Query 171901 ATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTG 171960 || | | || || || | ||| || || ||||| || | | || |||||||||| Sbjct 4307 CTACGGTCCTGTCATCTTCAAGTTGCTTGCCTGCAAATATAAGACGTTGCTGGTCAGGTG 4366 Query 171961 GTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTA 172020 | || |||||||| || || ||||| || | || | || | || |||| ||| | Sbjct 4367 GGATGCCTTCTTTGTCCTGGATTTTGGACTTAATGTTGTTGATCGAGTCAGACGGTTCGA 4426 Query 172021 CTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 |||| | || || || || || ||||| ||||| | |||||||||||| Sbjct 4427 CTTCCATGGTTATTGTCTTGCCGGTTAAGGTTTTCACGAATATCTGCAT 4475 >seq35076 Length=3390 Score = 87.8 bits (96), Expect = 3e-12 Identities = 158/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 ||||| || || || || | || | ||| | || | ||| || || ||||| || Sbjct 1616 ATACCTCCCCTCAGACGCAGGACAAGATGGAGGGTTGACTCCTTCTGTATGTTATAGTCG 1675 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 | |||| ||| | || ||||| || ||||| ||||| || | || || ||||| ||| Sbjct 1676 GCCAAAGTACGTCCATCCTCCAACTGCTTACCGGCAAAGATAAGCCTTTGCTGGTCTGGT 1735 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || || || || || || || ||| |||| || || || || || || || Sbjct 1736 GGGATGCCCTCCTTGTCCTGAATCTTAGTTTTGACGTTGTCAATGGTGTCAGAACTCTCG 1795 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATT 172070 || || |||||||||||||| ||||| | || || | || ||||||||| Sbjct 1796 ACCTCAAGAGTAATGGTTTTGCCAGTAAGGGTCTTGACAAAGATCTGCATT 1846 >seq18381 Length=6025 Score = 86.0 bits (94), Expect = 1e-11 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 || || ||||| || || | || ||||| | || | ||| || |||||| ||||| Sbjct 2071 ATCCCTCCTCTGAGACGGAGCACCAAATGGAGGGTGGACTCCTTTTGAATATTGTAATCA 2130 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 | | | ||| | || || | ||| || |||||||| || | || || ||||| || Sbjct 2131 GCAAGGGTTCGGCCATCCTCAAGTTGCTTCCCAGCAAAGATCAGCCTTTGCTGGTCTGGA 2190 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || ||||| || || || || || |||| ||||| || || || || || Sbjct 2191 GGAATGCCTTCCTTGTCCTGAATCTTGGTTTTGACATTGTCAATGGTGTCGGAACTCTCA 2250 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 || || ||||||||||| || ||||||| || || | ||| || ||||| Sbjct 2251 ACCTCGAGAGTAATGGTCTTGCCAGTTAGGGTCTTGACGAAGATTTGCAT 2300 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 901654394376000