Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Silene_20latifolia_20subsp._20alba_20[genbank_20GCA_5F001412135.1_20 2015-10-23] 307,720 sequences; 665,278,925 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq6285 136 1e-26 seq407 134 4e-26 seq6018 107 6e-18 seq4879 107 6e-18 seq2768 107 6e-18 seq18764 104 7e-17 seq5880 104 7e-17 seq37979 102 2e-16 seq11120 95.1 4e-14 seq8518 93.3 1e-13 seq43 84.2 6e-11 >seq6285 Length=35958 Score = 136 bits (150), Expect = 1e-26 Identities = 234/340 (69%), Gaps = 0/340 (0%) Strand=Plus/Plus Query 302538 ATTTCTTACGGTCATATCATAACCAATCATAATGTCTTCCATACTCTTGATTAAACGACG 302597 |||||| || ||| |||||| | ||| || ||||||||| ||| | | | || Sbjct 27936 ATTTCTGACAGTCCCATCATATTTGACCATGATATCTTCCATAGCCTTTACCAGCCTCCG 27995 Query 302598 CTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACC 302657 |||||| || ||||| ||| ||||| ||||| |||||||||||||| | | |||||| Sbjct 27996 CTGAATGTACCCAGTCTCAGAAGTTTTGACAGCAGTATCAATTAGACCTTCTCTACCACC 28055 Query 302658 CATAGCATGGAAGAATAGCTCTTCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAA 302717 |||||||||||| || | |||| ||| || || | | | | ||| |||| || || Sbjct 28056 CATAGCATGGAAAAAGAATTCTTGGGGTGTCAGACCTCTTAAATAAGAGTTCTCCACAAA 28115 Query 302718 ACCACGCGCCTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATA 302777 ||||| ||||||| || ||| || || || || ||||| | | | | Sbjct 28116 CCCACGACTCTCGGGCCCATAGTCATCTTTTGTGAAATGAGGCAGCGATCGACCAATAAA 28175 Query 302778 GCCGTATGGGATACGCTTTCCATCAACGTTCTGCTGTCCCAGGCACGAAATCATCTGCGA 302837 | | || |||||||| || ||||| |||||||| |||| ||| | | |||| || || Sbjct 28176 ATGGAAAGGTATACGCTTGCCTTCAACATTCTGCTGACCCACGCAAGCAGTCATTTGGGA 28235 Query 302838 AATATTTAAATCACTGCCCTTGGAGCCAGCATTTACCATA 302877 || || | | ||| || || || || ||| | |||||| Sbjct 28236 TATGTTGATAAAACTTCCTTTAGATCCTGCAGTAACCATA 28275 Score = 95.1 bits (104), Expect = 4e-14 Identities = 105/137 (77%), Gaps = 5/137 (4%) Strand=Plus/Plus Query 301831 GGAACACCACGGGTTACGTTAGACTTGG-ACGCAACACCAGCAAAGTGGAAAGTATTCAG 301889 |||||||| | || || || ||||| || || |||||||| | |||||||| ||||| Sbjct 27211 GGAACACCCAGAGTGACATT---CTTGGCACTCA-CACCAGCATAATGGAAAGTGTTCAG 27266 Query 301890 AGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAATCATACCAACCATTTCTCC 301949 ||| | |||||| | ||||||||||| ||| || |||| ||||| ||| ||||| Sbjct 27267 AGTCATTTGAGTGGCAGGCTCACCAATTGATTGAGCAGCAACGCAACCAATCATCTCTCC 27326 Query 301950 TGGTGCTACAATAGACT 301966 ||||||||| | ||||| Sbjct 27327 TGGTGCTACCAGAGACT 27343 >seq407 Length=47313 Score = 134 bits (148), Expect = 4e-26 Identities = 288/422 (68%), Gaps = 10/422 (2%) Strand=Plus/Minus Query 288936 CTTAAATCCATCCATACTTGTTAAAATTTGATTAAGTGTTTGTTCCCTTTCATCATTTGA 288995 || ||| |||||||| || | || ||||||||||||||||||||||||||||| Sbjct 36627 CTCAAAGCCATCCATCTCAGTGAGAAGCTGATTAAGTGTTTGTTCCCTTTCATCATTCCC 36568 Query 288996 ACCTCTTGAATCACCCGAATCGCTCCtttttttACCAACAGCATCAATTTCGTCAATGAA 289055 || | ||| | | | ||| ||| | | ||||||||||||||||| |||| || Sbjct 36567 TCCCCC--AATTCC---AGTACCTC-TTTGTCTCCCAACAGCATCAATTTCATCAACAAA 36514 Query 289056 AATCACACACGGAGAATTTTGTCTCGCAATTGCAAATAATTCTCTTACACGGGATGCTCC 289115 || | || |||| ||||| | |||| || ||| | || | || || || || || Sbjct 36513 AACAATGCATGGAGCATTTTCTTTCGCCTTTTTAAAGAGATCACGCACTCGAGAAGCACC 36454 Query 289116 AAGACCAACATACATTTCTACAAATTCAGAAGCGGATACTTGA-ATGAATGTTACATTTG 289174 | |||||| |||| || || ||||| ||| | || | | || | |||| ||| || Sbjct 36453 CACGCCAACAAACATCTCAACGAATTCTGAACCCGA-AATGGAGAAAAATGGCACACCTG 36395 Query 289175 CTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCTTACCTGTTCCAGGTGGTCCCTCTAATA 289234 |||| ||||| | ||| | ||||| || ||||| ||||| || || || || | | | Sbjct 36394 CTTCCCCTGCAATAGCCTTTGCCAGCAGGGTCTTTCCTGTCCCTGGAGGACCAACAAGAA 36335 Query 289235 GAACTCCCTTTGGTACTTTTGCCCCAGCAGACTTATATTTCTCAGGGCTCTTTAA-AAAT 289293 |||| || || || | || ||| ||| | || | || ||| | ||||| ||| Sbjct 36334 GAACACCTTTAGGAATGCGAGCTCCAACAGCTGTGAATCTTTC-GGGTTTTTTAAGGAAT 36276 Query 289294 TCTACAATTTCCTCAAGTTCATATTTTGCCTCATCACATCCTGCTACATCAGCAAAAGTA 289353 || || | |||| | | || | ||||| |||||| || || |||||| ||||||| Sbjct 36275 TCGACTACTTCCACGAAATCCTGCTTTGCTTCATCAACACCGGCAACATCATCAAAAGTT 36216 Query 289354 AT 289355 || Sbjct 36215 AT 36214 >seq6018 Length=12126 Score = 107 bits (118), Expect = 6e-18 Identities = 227/339 (67%), Gaps = 0/339 (0%) Strand=Plus/Minus Query 302539 TTTCTTACGGTCATATCATAACCAATCATAATGTCTTCCATACTCTTGATTAAACGACGC 302598 ||||| || ||| |||||| | |||||| || ||||| ||| | || | || Sbjct 7540 TTTCTAACAGTCCCATCATATTTGACCATAATATCCTCCATTGCCTTTACTAGCCTCCGT 7481 Query 302599 TGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCC 302658 ||||| || ||||| ||| ||||| ||||| |||||||||| ||| | | || ||| Sbjct 7480 TGAATGTAGCCAGTCTCAGAAGTTTTGACAGCGGTATCAATTAAACCTTCTCTGCCTCCC 7421 Query 302659 ATAGCATGGAAGAATAGCTCTTCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAA 302718 || |||||||| || | ||| | ||| | ||| | | | | ||| |||| || || Sbjct 7420 ATTGCATGGAAAAAGAACTCCTGAGGTGTCAACCCTCTTAGATAAGAGTTCTCCACAAAC 7361 Query 302719 CCACGCGCCTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAG 302778 ||||| ||| ||| || ||| ||| || || || |||| || | ||| | | Sbjct 7360 CCACGACTCTCTGGCCCATAGTCATCCTTTGTGAAATGAGGCAATGTACGGTTTATAAAA 7301 Query 302779 CCGTATGGGATACGCTTTCCATCAACGTTCTGCTGTCCCAGGCACGAAATCATCTGCGAA 302838 | || || || || || | || ||||||||||||| || | | ||||||| || Sbjct 7300 TGAAAAGGTATCCGTTTGCCTACGACATTCTGCTGTCCCACACAAGCAGTCATCTGGGAT 7241 Query 302839 ATATTTAAATCACTGCCCTTGGAGCCAGCATTTACCATA 302877 || || | | ||| || || || || ||| | |||||| Sbjct 7240 ATGTTGATAAAACTTCCTTTCGACCCTGCAGTGACCATA 7202 >seq4879 Length=36966 Score = 107 bits (118), Expect = 6e-18 Identities = 227/339 (67%), Gaps = 0/339 (0%) Strand=Plus/Minus Query 302539 TTTCTTACGGTCATATCATAACCAATCATAATGTCTTCCATACTCTTGATTAAACGACGC 302598 ||||| || ||| |||||| | |||||| || |||||| ||| | || | ||| Sbjct 7290 TTTCTAACAGTCCCATCATATTTGACCATAATATCCTCCATAGCCTTTACTAGCCTCCGC 7231 Query 302599 TGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCC 302658 ||||| || ||||| || ||||| ||||| |||||||||| ||| | | || ||| Sbjct 7230 TGAATGTAGCCAGTCTCGGAAGTTTTGACAGCGGTATCAATTAAACCTTCTCTGCCTCCC 7171 Query 302659 ATAGCATGGAAGAATAGCTCTTCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAA 302718 || |||||||| || | || | ||| | ||| | | | | ||| |||| || || Sbjct 7170 ATTGCATGGAAAAAGAATTCCTGAGGTGTCAACCCTCTTAGATAAGAGTTCTCCACAAAC 7111 Query 302719 CCACGCGCCTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAG 302778 ||||| ||| ||| || || ||| || || || |||| || | ||| | | Sbjct 7110 CCACGACTCTCTGGCCCATAATCATCCTTTGTGAAATGAGGCAATGTACGGTTTATAAAA 7051 Query 302779 CCGTATGGGATACGCTTTCCATCAACGTTCTGCTGTCCCAGGCACGAAATCATCTGCGAA 302838 | || || || || || |||| ||||||||||||| || | | ||||||| || Sbjct 7050 TGAAAAGGTATCCGTTTGCCTACAACATTCTGCTGTCCCACACAAGCAGTCATCTGGGAT 6991 Query 302839 ATATTTAAATCACTGCCCTTGGAGCCAGCATTTACCATA 302877 || || | | ||| || || || || ||| | |||||| Sbjct 6990 ATGTTGATAAAACTTCCTTTCGACCCTGCAGTGACCATA 6952 >seq2768 Length=17220 Score = 107 bits (118), Expect = 6e-18 Identities = 204/298 (68%), Gaps = 2/298 (1%) Strand=Plus/Plus Query 251403 GGCGATAAGACCACACTTATTACACACATGGACGCTGTAAGCATCAGATGCGTCATATAG 251462 |||||| | ||||| | ||| ||||| || || ||||||||| | |||| | || Sbjct 5328 GGCGATCAACCCACAGCGCTCACAAACATGAACTCTATAAGCATCACTTTGGTCAAAGAG 5387 Query 251463 CCGACCCTTGGTGAAGCGAGATGCACCGTGTGAAATCATACAATCACGCTCCATTTCACC 251522 || ||||| |||| | | ||||| || | |||||| || || |||||||| || || Sbjct 5388 CCTCTCCTTGAGGAAGTGGGCGGCACCATGAGCAATCATGCAGTCTCGCTCCATCTCTCC 5447 Query 251523 GAAACGAAGACCACCATCGCGAGCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCAT 251582 || || ||||| ||||| |||| ||||| || |||||||| | || ||| | || Sbjct 5448 AAATCGGAGACCGCCATCTCGAGATCTACCTTCAGCAGGCTGCCTCGTCAGAATTTGCAC 5507 Query 251583 AGGACCGATGGAGCGGCTATGTTGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAA 251642 ||||| || ||| ||| |||| ||||||||||| || | |||||| | Sbjct 5508 TGGACCTCGTCCACGAGAATGGATCTTGTCATCAACCATATGCTTCAGCCTTTGGTAGTA 5567 Query 251643 TGCGGGACCGATGAAGATGCTCGAAGGCA-TTTGCTCTCCAGTTAGAGCGTTATACAT 251699 || ||| || | ||| || | | || | || ||| ||||| || |||| ||||| Sbjct 5568 TGTGGGCCCCAGGAATATCATTGCAGTTAGCTTCCTC-CCAGTGTGACCGTTGTACAT 5624 >seq18764 Length=5933 Score = 104 bits (114), Expect = 7e-17 Identities = 155/220 (70%), Gaps = 0/220 (0%) Strand=Plus/Plus Query 289030 CCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATTGCA 289089 ||||| ||||||| ||| |||||||| || | |||| ||||| | ||||||| | Sbjct 1829 CCAACTGCATCAAGTTCATCAATGAATATGATTGACGGTGAATTCTTCCTCGCAACACCG 1888 Query 289090 AATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAAGCG 289149 || | ||||| | || | ||||| |||||| ||| || ||||||||| || Sbjct 1889 AAAAGGTCTCTGATTCGTGCAGCTCCCCTTCCAACAAACAACTCCACAAATTCACTTGCA 1948 Query 289150 GATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCTTA 289209 |||||| | |||| |||| ||||| || || ||||| | || || | || || Sbjct 1949 GATACTGAGAAAAATGGTACACCAGCTTCTCCAGCCACTGCACGGGCTAGTAAGGTTTTT 2008 Query 289210 CCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTA 289249 ||||||||||||||||| | || ||||| || || |||| Sbjct 2009 CCTGTTCCAGGTGGTCCGACCAAGAGAACACCTTTGGGTA 2048 >seq5880 Length=12336 Score = 104 bits (114), Expect = 7e-17 Identities = 310/469 (66%), Gaps = 16/469 (3%) Strand=Plus/Plus Query 288889 ATATCGGCTCTGTTTGTTGCTGCCAATACAACAATAGATTCGGTTTG---CTTAAATCCA 288945 || || |||||||| || || || | ||||| || |||| | || ||| ||| Sbjct 7799 ATGTCAGCTCTGTTAGTAGCAGCAATTACAATGATGC---CGGTATTACCCTCAAAACCA 7855 Query 288946 TCCATACTTGTTAAAATTTGATTAAGTGTTTGTTCCCTTTCATCATTTGAACCTCTTGAA 289005 ||||| || | || ||||| | || ||||||||||||||||| || | || Sbjct 7856 TCCATCTCCGTGAGAAGCTGATTCAACGTCTGTTCCCTTTCATCATTCCCTCCACC--AA 7913 Query 289006 TCACCCGAATCGCTCCtttttttACCAACAGCATCAATTTCGTCAATGAAAATCACACAC 289065 | || | | | ||| | | || || ||||| ||||| |||| |||| | ||| Sbjct 7914 TT-CCAGTACCTCTC---TGCCTCCCCACTGCATCTATTTCATCAACAAAAACAATACAT 7969 Query 289066 GGAGAATTTTGTCTCGCAATTGCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACA 289125 |||| ||||| | | || || ||||| || | || || ||||| || | ||||||| Sbjct 7970 GGAGCATTTTCTTTTGCCTTTTTAAATAGATCACGCACTCGAGATGCACCCACACCAACA 8029 Query 289126 TACATTTCTACAAATTCAGAAGCGGATACTTGA-ATGAATGTTACATTTGCTTCGCCTGC 289184 |||| ||||||||||| ||| | || | | || | |||| ||| ||||| || || Sbjct 8030 AACATCTCTACAAATTCGGAACCAGA-AATGGAGAAAAATGGAACACCAGCTTCTCCAGC 8088 Query 289185 TACTGCCCTCGCCAGAAGTGTCTTACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTT 289244 | ||| | || || | |||||| || || || || || ||| | | ||||| || || Sbjct 8089 AATAGCCTTTGCAAGCAATGTCTTTCCGGTACCTGGAGGACCCACAAGAAGAACACCTTT 8148 Query 289245 TGGTACTTTTGCCCCAGCAGACTTATATTTCTCAGGGCTCTTTAA-AAATTCTACAATTT 289303 || | || ||| | | | | ||||| |||| ||||| || || |||| || Sbjct 8149 AGGGATGCGAGCTCCAACTGCTGTGAACCTCTCA-GGCTTTTTAAGGAACTCGACAACTT 8207 Query 289304 CCTCAAGTTCATATTTTGCCTCATCACATCCTGCTACATCAGCAAAAGT 289352 || | || | ||||| |||||| || || |||||| ||||||| Sbjct 8208 CCATGAAATCCTGCTTTGCTTCATCAACCCCAGCAACATCATCAAAAGT 8256 >seq37979 Length=12753 Score = 102 bits (112), Expect = 2e-16 Identities = 269/406 (66%), Gaps = 6/406 (1%) Strand=Plus/Minus Query 288938 TAAATCCATCCATACTTGTTAAAATTTGATTAAGTGTTTGTTCCCTTTCATCATTTGAAC 288997 |||| |||||||| || | | ||||| | || || ||||| || |||||| || Sbjct 10332 TAAACCCATCCATCTCAGTAAGCAACTGATTCAAGGTCTGCTCCCTCTCGTCATTTCCAC 10273 Query 288998 CTCTTGAATCACCCGAATCGCTCCtttttttACCAACAGCATCAATTTCGTCAATGAAAA 289057 | | | || ||| || ||| ||| | | || || |||||||| || |||||||| | Sbjct 10272 CACCT--ATG--CCGG-TCCCTC-TTTGTCTCCCTACCGCATCAATCTCATCAATGAAGA 10219 Query 289058 TCACACACGGAGAATTTTGTCTCGCAATTGCAAATAATTCTCTTACACGGGATGCTCCAA 289117 || || || | |||| | || | || || |||| ||| | || || |||| Sbjct 10218 CCAGGCAAGGTGCATTTGCATTTGCCTTGTTGAACAAGTCTCGTACCCTCGACGCCCCAA 10159 Query 289118 GACCAACATACATTTCTACAAATTCAGAAGCGGATACTTGAATGAATGTTACATTTGCTT 289177 || ||| |||| || | || |||||| |||| | | || | || ||| | Sbjct 10158 CTCCGACAAACATCTCAATGAACTCAGAACCGGAGAGGGAGAAAAAGGGGACTCCTGCCT 10099 Query 289178 CGCCTGCTACTGCCCTCGCCAGAAGTGTCTTACCTGTTCCAGGTGGTCCCTCTAATAGAA 289237 | ||||||| ||| | || || || ||||| || || || ||||||||| ||| || | Sbjct 10098 CCCCTGCTATGGCCTTGGCTAGTAGGGTCTTTCCAGTGCCTGGTGGTCCCACTAGTAATA 10039 Query 289238 CTCCCTTTGGTACTTTTGCCCCAGCAGACTTATATTTCTCAGGGCTCTTTAAAAATTCTA 289297 |||||||||| | || || || | | ||||||||||| | ||||| ||||| | Sbjct 10038 CTCCCTTTGGGATTTCGGCACCTATTGCTGTGAATTTCTCAGGGGTTTTTAAGAATTCGA 9979 Query 289298 CAATTTCCTCAAGTTCATATTTTGCCTCATCACATCCTGCTACATC 289343 | || || | | || | |||||| || || ||||||||| || Sbjct 9978 CGATCTCTTGGAAGTCTTGTTTTGCTTCGTCGATTCCTGCTACGTC 9933 >seq11120 Length=8366 Score = 95.1 bits (104), Expect = 4e-14 Identities = 257/383 (67%), Gaps = 9/383 (2%) Strand=Plus/Minus Query 288964 TGATTAAGTGTTTGTTCCCTTTCATCATTTGAACCTCTTGAATCACCCGAATCGCTCCtt 289023 |||||||| || ||| | ||||||||||||||| | || | || || ||| || Sbjct 5649 TGATTAAGGGTACTTTCACGTTCATCATTTGAACCCCCA-AAGCCTCCACGTC-CTC-TT 5593 Query 289024 tttttACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCA 289083 | || | ||||||||||| |||||||| || | || || | | ||| || || Sbjct 5592 GCTCGGCCTATGGCATCAATTTCATCAATGAATATTATACTAGGTGCACATTGCCTTGCT 5533 Query 289084 ATTGCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCA 289143 | |||| | ||| || | ||| | ||| | ||| ||| |||| || | ||| || Sbjct 5532 TCTTGGAATAGGTTTCTAACCCTGGAGGGTCCCACACCGACAAACATCTCCATAAAGTCG 5473 Query 289144 GAAGCGGATACTTGA-ATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAG 289202 ||| ||| || | || | ||| | |||| | ||| || || |||| | |||| || Sbjct 5472 GAACCGGCTA-TGGATAGGAAGGGTACACCGGATTCCCCAGCAGTTGCCTTGGCCAACAG 5414 Query 289203 TGTCTTACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGCCCCAGC 289262 ||||| || ||||| || || || |||| ||| | || || || | |||||| || Sbjct 5413 CGTCTTTCCAGTTCCTGGAGGACCAACTAAAAGAGCACCTTTCGGGATTTTTGCACC--T 5356 Query 289263 AGA-CTT-ATATTTCTCAGGGCTCTTTAAAAATTCTACAATTTCCTCAAGTTCATATTTT 289320 ||| ||| ||| |||| || |||| | || | |||| ||| || ||| | ||| Sbjct 5355 AGATCTTCATACTTCTTGGGATTCTTCAGGAAGTGAACAAACTCCATAATTTCTTGTTTG 5296 Query 289321 GCCTCATCACATCCTGCTACATC 289343 || |||||||| || || ||||| Sbjct 5295 GCTTCATCACAACCAGCAACATC 5273 >seq8518 Length=9945 Score = 93.3 bits (102), Expect = 1e-13 Identities = 120/166 (72%), Gaps = 0/166 (0%) Strand=Plus/Plus Query 60180 CCATAAGACGGGTTCCAAATTGTCCGTTTGGCTGGAATAGATTAATGTTGTTAGAGCCTA 60239 ||||| ||| || ||||| ||||| || ||| | ||||| | ||||| ||||| | Sbjct 3436 CCATATTACGAGTGCCAAACTGTCCATTGGGCATCAGAAGATTGACATTGTTGGAGCCCA 3495 Query 60240 CGAAATTTTGAGCGAGACCAACAATAGCACCATTTAAACTGGCTTCACCGTGATGATATC 60299 | |||| ||||| | || || || | | | || ||| ||||||| || ||||| Sbjct 3496 CAAAATCCTGAGCCATGCCGACTATTGTAGTCTGTATACTTACTTCACCATGGTGATAAG 3555 Query 60300 CAGAATGTTCTGAAACATATCCACTGAATTGTGCGACTTTAATTTC 60345 | || | ||| |||||||| ||||||||||| || |||||||| || Sbjct 3556 CTGACTTTTCCGAAACATAACCACTGAATTGCGCTACTTTAATCTC 3601 >seq43 Length=46030 Score = 84.2 bits (92), Expect = 6e-11 Identities = 218/327 (67%), Gaps = 8/327 (2%) Strand=Plus/Plus Query 289021 CtttttttACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTC 289080 |||||| ||| ||||||||||| || ||||| || || | | || | | || | Sbjct 43950 CTTTTTCGACCCACAGCATCAATCTCATCAATAAAGATAATGCTAGGTGCACATTTCCGT 44009 Query 289081 GCAATTGCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAAT 289140 || | |||| || ||||| | || || ||| ||| | || | ||| |||| Sbjct 44010 GCTTCTCTGAATAGGTCCCTTACCCTGGCTGTCCCAGTACCTATGTATAATTCGTCAAAA 44069 Query 289141 TCAGAAGCGGATA--CTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCA 289198 ||||| | |||| || || || | |||| | ||| || ||| || | || | Sbjct 44070 TCAGACCCAGATAAGCTCAAA--AAGGGCACATCAGATTCACCGGCTGTCGCTTTAGCTA 44127 Query 289199 GAAGTGTCTTACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGC-C 289257 | |||||||| |||||||| || || || | || ||| | || || || | || || | Sbjct 44128 GGAGTGTCTTTCCTGTTCCCGGAGGACCAACCAAGAGAGCACCTTTAGGAATCTTGGCAC 44187 Query 289258 CCAGCAGACTT-ATATTTCTCAGGGCTCTTTAAAAATTCTACAATTTCCTCAAGTTCATA 289316 ||| | |||| ||| |||| ||| |||| | ||| | |||| |||| | ||| | Sbjct 44188 CCA--ATACTTCATACTTCTTCGGGTTCTTGAGAAAGTGAACAAATTCCATGATTTCTTC 44245 Query 289317 TTTTGCCTCATCACATCCTGCTACATC 289343 |||||||||||||| ||||| ||||| Sbjct 44246 CTTTGCCTCATCACAGCCTGCAACATC 44272 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1466014719941640