Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Silene_20latifolia_20subsp._20alba_20[genbank_20GCA_5F001412135.1_20 2015-10-23] 307,720 sequences; 665,278,925 total letters Query= NC_028104.1 Length=73689 Score E Sequences producing significant alignments: (Bits) Value seq8518 118 5e-22 >seq8518 Length=9945 Score = 118 bits (130), Expect = 5e-22 Identities = 136/183 (74%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 65087 CGTGTTCCAAACTGACCATTTGGCATTAATAAATTAATATTGTTTGAACCAATAAAATTC 65146 || || |||||||| ||||| ||||| | | ||| | |||||| || || | ||||| | Sbjct 3444 CGAGTGCCAAACTGTCCATTGGGCATCAGAAGATTGACATTGTTGGAGCCCACAAAATCC 3503 Query 65147 TGAGCCATTCCGATAATTGCTGCATTTAAACTCGCTTCACCGTGATGATATCCTGAATGT 65206 |||||||| |||| |||| | | || ||| ||||||| || ||||| |||| | | Sbjct 3504 TGAGCCATGCCGACTATTGTAGTCTGTATACTTACTTCACCATGGTGATAAGCTGACTTT 3563 Query 65207 TCAGAGACATATCCACTAAATTGAGCAACTTTTATTTCCGTTGTTAAATTCTTTTTAAAT 65266 || || ||||| ||||| ||||| || ||||| || || ||||||||||||||| Sbjct 3564 TCCGAAACATAACCACTGAATTGCGCTACTTTAATCTCATGAACCAAATTCTTTTTAAAT 3623 Query 65267 GCA 65269 ||| Sbjct 3624 GCA 3626 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 234796120458000