Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Silene_20latifolia_20subsp._20alba_20[genbank_20GCA_5F001412135.1_20 2015-10-23] 307,720 sequences; 665,278,925 total letters Query= NC_028955.1 Length=197361 Score E Sequences producing significant alignments: (Bits) Value seq1 1014 0.0 seq269878 120 4e-22 seq67736 98.7 1e-15 seq261419 87.8 2e-12 >seq1 Length=146306 Score = 1014 bits (1124), Expect = 0.0 Identities = 1979/2902 (68%), Gaps = 86/2902 (3%) Strand=Plus/Plus Query 184323 TAGGTACAGCAGACTTTATGATACATCACATACACGCTTTCCAGATTCATGTTTGTGTAT 184382 |||| || || || ||| || | || ||||| || ||||| |||||||| ||| Sbjct 50832 TAGGGACCGCGGATTTTTTGGTCCACCACATTCATGCTTTTACAATTCATGTAACGGTAC 50891 Query 184383 TAATTCTTCTCAAGGGTGTTTTATACTCTAGAAACTCACAATTAATACCAGATAAGAGTA 184442 | || ||| | || |||||| ||| || | | ||| | || ||||| ||||| || Sbjct 50892 TGATACTTTTAAAAGGTGTTCTATTTGCTCGTAGCTCTCGTTTGATACCGGATAAAGCTA 50951 Query 184443 AGTTAGGATTCAGATTCCCTTGTGATGGTCCTGGTAGAGGAGGCACTTGTCAGGTATCAG 184502 | | || || | |||||||||||||| ||||| ||||| || || || || ||||| | Sbjct 50952 ATCTTGGGTTTCGTTTCCCTTGTGATGGGCCTGGAAGAGGGGGAACATGCCAAGTATCCG 51011 Query 184503 GATGGGATCATGTATTCCTTGGTTTATTCTGGATGTATAATTGCATCTCTATAGTAATCT 184562 ||||||||||||||| | || | ||||||||||| || || || ||||||| | Sbjct 51012 CGTGGGATCATGTATTCTTAGGGCTGTTCTGGATGTACAACGCAATTTCGGTAGTAATAT 51071 Query 184563 TCCACTTTAGTTGGAGAATGCA---AGATGTATGGGGTC--------------------- 184598 | || |||||||||| |||||| |||||| |||||| Sbjct 51072 TTCATTTTAGTTGGAAAATGCAGTCAGATGTTTGGGGTAGTATAAGTGATCAGGGGGTGG 51131 Query 184599 -------TATCA--GGAGGTAACTTTGCTCAGAGTTCAATTACAATCAATGGATGGTTGA 184649 ||||| ||||| |||||||| || ||||| ||||| || ||||||||| | Sbjct 51132 TAACTCATATCACGGGAGGAAACTTTGCGCAAAGTTCCATTACTATTAATGGATGGCTTC 51191 Query 184650 GAGACTTCTTATGGTCACAGTCAAGTCAAGTTCTCAATAGTTATGGA-CAAGAC-ATCAG 184707 | || ||||||||| ||||| || || || | | |||||| | | ||| | Sbjct 51192 GTGATTTCTTATGGGCACAGGCATCCCAGGTAATTCAGTCTTATGGTTCTTCATTATCTG 51251 Query 184708 CATGTATGGTTTGCTATTTCTTGGAGCACATTTTGTATGGGCATTCAGTTTGATGTTCCT 184767 ||| |||| | | || || || || |||||||||||||| || ||||| ||||| || Sbjct 51252 CAT--ATGGCCTCTTTTTCCTAGGTGCTCATTTTGTATGGGCTTTTAGTTTAATGTTTCT 51309 Query 184768 ATGGAGTGGTAGAGGATACTGGCAAGAGTTGATAGAGTCTATTGCTTGGGCACATAACAA 184827 || || || | || || |||||||| | || || || || | |||||| ||||| || Sbjct 51310 ATTTAGCGGGCGTGGTTATTGGCAAGAACTTATTGAATCCATCGTTTGGGCTCATAATAA 51369 Query 184828 ATTAAAACTTGCACCTACCATTCAACCAAGAGCAATGTCAATTACACAAGGACGTGCTGT 184887 |||||| |||| ||| | | ||| || ||||| || ||| ||||||||||||||| Sbjct 51370 ATTAAAGGTTGCTCCTGCTACTCAGCCTAGAGCCTTGAGCATTGTACAAGGACGTGCTGT 51429 Query 184888 TGGAGTTGCACACTTCTTACTTGGAGGTATTGCCACAACATGGGCATTCTTCTTTGCTCA 184947 ||||| | || | | | || || || |||||||||||||||||||||||||| || Sbjct 51430 AGGAGTAACCCATTACCTTCTGGGTGGAATTGCCACAACATGGGCATTCTTCTTAGCAAG 51489 Query 184948 CCTTATCCCCTTAAGTTAAATCATGGCTACTA-------AAAC-------------AAAA 184987 |||| | || | ||| |||||| | ||| || | Sbjct 51490 AATTATTGCAGTAGGATAA----TGGCTAGGAGGATTTGAAAGGCATTATGGCATTAAGA 51545 Query 184988 TTTCCAAAATTTAATCAAGATTTGGCAAGTGATCCTACAACTAGGAGATTGTGGTATGGA 185047 ||||||| |||| |||| || || || || || || | | | |||| ||| Sbjct 51546 TTTCCAAGGTTTAGCCAAGGCTTAGCTCAGGACCCCACTACGCGTCGTATTTGGTTTGGT 51605 Query 185048 TTAGCAACTGCACATGACTTTGAGAGTCATGACAATATGACAGAAGAGAAGT-TATATCA 185106 | || || |||||||| || ||||||||||| |||| || ||||| | || | ||||| Sbjct 51606 ATTGCTACCGCACATGATTTCGAGAGTCATGATGATATTACCGAAGA-ACGTCTTTATCA 51664 Query 185107 AAAATTATTTGCTACACACTTTGGTCATCTTGCAATTATCTTTCTATGGGTTGCAGGTAA 185166 || | |||||| | |||||||| || | ||||| || ||||| ||| | | || || Sbjct 51665 GAATATTTTTGCTTCTCACTTTGGACAATTAGCAATAATTTTTCTGTGGACTTCCGGGAA 51724 Query 185167 TTTAATTCATATAGCATGGCAAGGTAACTTTGAACAGTTTGTAGCAGACCCACAACATGT 185226 | | ||||| |||| |||||||| || ||||| | ||| ||||| |||||| Sbjct 51725 TCTGTTTCATGTAGCTTGGCAAGGAAATTTTGAGTCATGGGTACAGGACCCTTTACATGT 51784 Query 185227 GATACCTATAGCACATAGAATATGGGATCCTCATTTTGGTCAAGGTGCAACAGATGCATA 185286 | |||||| || ||| ||| ||||| ||||||||||||||| || || || | Sbjct 51785 AAGACCTATCGCTCATGCAATTTGGGACCCTCATTTTGGTCAACCGGCTGTGGAAGCCTT 51844 Query 185287 CACACAGGCAGGTTCTACTTTTCCTGTGAACAGATTGTATTCTGGACTGTATCATTGGTG 185346 || | || ||| || | || ||||| | |||||||| | ||||| ||||| Sbjct 51845 TACGCGGGGGGGTGCTCTTGGCCCAGTGAATATCGCTTATTCTGGTGTTTATCAGTGGTG 51904 Query 185347 GTACACAGTTGGTATGAGAACTAATATGCAACTGTATACTGGTGGTGCATTTATGATTCT 185406 ||| ||| | || | | |||||| | | || |||||||| | | ||| | | | Sbjct 51905 GTATACAATCGGGTTACGCACTAATGAGGATCTTTATACTGGAGCTCTTTTTCTATTATT 51964 Query 185407 ACTAGCATTGGTATCTTTACTTGGTGCTCAATTACATCTGAAACCAAAGTTTGCACCTAA 185466 || | | |||||||||| || | | |||||||| |||| || | ||| | Sbjct 51965 TCTTTCTGTTATATCTTTACTGGGGGGTTGGTTACATCTACAACCGAAATGGAAACCGAG 52024 Query 185467 GCTTGCTTGGTTTAAAGATAATGAGAACAGATTAAATCATCATCTATCAGTTCTATTTGG 185526 || | ||||| ||| || || | | | |||||||| |||| | || || || Sbjct 52025 CGTTTCGTGGTTCAAAAATGCCGAATCCCGCCTCAATCATCACTTATCCGGACTCTTCGG 52084 Query 185527 ATTCAGTTCTATTGCATGGGCTGGTCATTTGATACACGTAGCAATACCTGCATCAAGAGG 185586 | | || || | || ||| | || ||||| | || || || || || | | | || || Sbjct 52085 AGTAAGCTCCTTGGCTTGGACAGGACATTTAGTTCATGTCGCTATTCCCGGAGCCAGGGG 52144 Query 185587 A-ATCACTGTAGATTGGACTAATTATGTGTTTATGAA--ACCTCATCCTGCAGGTTTACT 185643 | || | ||| ||| ||||| | | | | | | ||| |||||| ||| ||| Sbjct 52145 CGAGTACGTTCGAT-GGAATAATT-TCT-TAGACGTATTACCACATCCTCAAGGATTAGG 52201 Query 185644 GCCATTCTTTACAGGAAACTGGGGTGTTTATGCACAAAATCCTGATGGATTAAATCAAAT 185703 || | |||||||| | ||| | ||||||| |||||||| || | | ||| | Sbjct 52202 CCCCCTTTTTACAGGTCAGTGGAATCTTTATGCTCAAAATCCCGACTCAAGCAGTCATTT 52261 Query 185704 ATTCAATACAACAGAGGGTTCTGGAACAGCAATATTAACA-TTCATGGGTGGTTTCCATC 185762 || ||| | | || | ||||| || || |||| ||| |||| || ||||||| Sbjct 52262 GTTTGGTACCTCCCAAGGAGCGGGAACGGCTATTCTAACCCTTCTTGGG-GGATTCCATC 52320 Query 185763 CACAAACAGAGGCATTATGGTTGACTGATATAGCACATCATCACCTTGCAATAGGAGTAA 185822 ||||||| | |||||||| |||||||| || |||||||| | || || | | | | Sbjct 52321 CACAAACGCAAAGTTTATGGTTAACTGATATTGCTCATCATCATTTAGCTATTGCATTTA 52380 Query 185823 TATTCATTATTGCAGGTCATATGTATAGAA-GTGCTTGGGGTATTGGTCACTCAATGAAG 185881 | || || |||| |||||||||||||||| | ||| |||||||| ||| ||||| Sbjct 52381 TTTTTCTTGTTGCTGGTCATATGTATAGAACGAACTT-TGGTATTGGGCACAGTATGAAA 52439 Query 185882 GAGATACTTGAAGCACATACACCACCAAGAGGAGGACTAGGTGCAGGTCATAAAGGATTA 185941 || | | |||||||||| || ||| |||| | ||||| || ||||| || | Sbjct 52440 GATCTTTTAGAAGCACATATTCCTCCAGGAGGGCGGCTAGGGCGGGGACATAAGGGTCTT 52499 Query 185942 TATGAAACAGTTACAGACTCATTACACCTACAGTTAGGTCTTGCACTTGCATCTCTAGGT 186001 ||||| ||| | | | || | || | || ||||| ||||| || || ||| |||| Sbjct 52500 TATGACACAATCAACAATTCGATTCATTTTCAATTAGGACTTGCTCTAGCTTCTTTAGGA 52559 Query 186002 GTTGTTACTAGTCTGGTGGCACAACATATGTACTCAATGCCATCCTATGCTTTCATAGCA 186061 ||| | ||| | |||| || ||||| ||||| || | || || ||||| ||||||||| Sbjct 52560 GTTATAACTTCTTTGGTAGCCCAACACATGTATTCTTTACCTTCGTATGCGTTCATAGCA 52619 Query 186062 CAGGCGCATACTACGCAAGCTGCTCTATATGTTCATCATCAATACATTGCA--ACTGCTC 186119 || | |||||| |||||||| ||||| |||||||||||||| ||| | | || Sbjct 52620 CAAGACTTTACTACTCAAGCTGCATTATATACGCATCATCAATACATCGCAGGATTCATC 52679 Query 186120 TGATGGTTGGTGCTTTTGCGCATGGAGCAATATTTTTTGTTAGAGACTTTGATCCTACTC 186179 ||| || |||||||| |||||||| |||||||| || |||| | |||| | Sbjct 52680 --ATGACCGGAGCTTTTGCTCATGGAGCTATATTTTTCATTCGAGATTACAATCCGGAAC 52737 Query 186180 TGAATAAGGACAATGTTCTTGATAGAATGCTACAGCACAAAGAAGCAATTATAAGTCACT 186239 |||| |||| ||||| | | |||||| || | || |||||||| || ||| ||| | Sbjct 52738 AGAATGAGGATAATGTATTGGCAAGAATGTTAGACCATAAAGAAGCTATCATATCTCATT 52797 Query 186240 TAAGTTGGGTATCACTATTCCTTGGATTCCATACTTTAGGAATCTATGTCCATAATGATG 186299 ||||||||| || || | || |||||||||||||| | ||||| ||||| |||| Sbjct 52798 TAAGTTGGGCCAGTCTCTTTTTAGGGTTCCATACTTTAGGTCTTTATGTTCATAACGATG 52857 Query 186300 TAGTAATGGCATTTGGTCATCCTGAGAGACAGATATTAATTGAACCTATATTTGCACAGT 186359 | | | || ||||| ||| || | ||| || || || |||||||||||||| || | Sbjct 52858 TCATGCTTGCTTTTGGGACTCCAGAAAAACAAATTTTGATCGAACCTATATTTGCTCAAT 52917 Query 186360 GGATACAGGCAGCATCA-GGTAAGATGATGTATGGATT-AAGTTTCTTACTATCTGATCC 186417 ||||||| | || ||| ||||| | ||||| || | | ||| |||| | Sbjct 52918 GGATACAATCCGC-TCATGGTAAAACTTCATATGGGTTCGACGTACTT-TTATCCTCAAC 52975 Query 186418 AAATAGTGCTGCAAGTCTA-GCAGCAGAGAGTATGCCTGGTAATCATTACTGGATGAGTG 186476 || | | || || | |||| | ||| |||| | | |||| | | || Sbjct 52976 AAGCGGCCCGGC-CTTCAATGCAGGTCGAAATAT--ATGGT-TGCCTGGCTGGTTAAATG 53031 Query 186477 CTATGAATGATCAAACAAACAGTCTGTTTCTACCAATAGGACCTGCTGATTTATTAGTTC 186536 |||| ||||| | | || | | || || ||||||| || | || || ||||||| Sbjct 53032 CTATTAATGAGAATAGTAATTCTTTATTCTTAACAATAGGGCCCGGAGACTTTTTAGTTC 53091 Query 186537 ATCATGCTATTGCACTTGGATTACATACTACAACTTTAATCCTAGTCAAGGGTGCATTAG 186596 ||||||||||||| || || |||||||| || || || ||| |||| || ||||| |||| Sbjct 53092 ATCATGCTATTGCTCTAGGTTTACATACAACTACATTGATCTTAGTAAAAGGTGCTTTAG 53151 Query 186597 ATGCTAGAGGTTCAAAACTCATACCAGATAAGAAAGATTTAGGATATTCATTCCCTTGTG 186656 |||| |||| || || | || |||||||| || ||||| || ||| || ||||| | Sbjct 53152 ATGCCCGAGGCTCCAAGTTAATGCCAGATAAAAAGGATTTCGGTTATAGTTTTCCTTGCG 53211 Query 186657 ATGGTCCAGGCAGAGGTGGTACTTGTGATAGTTCTGGTTGGGATGCTTTCTATCTCTCTG 186716 ||||||| || | || ||||||||||||| ||| | |||||| ||||| ||| | | | Sbjct 53212 ATGGTCCGGGGCGGGGCGGTACTTGTGATATTTCGGCTTGGGACGCTTTTTATTTGGCGG 53271 Query 186717 TGTTCTGGGCATTCAATACAATAGCATGGGCAGATTTTTATTGGCACTGGAAGAACCTTG 186776 | || ||| || ||||| || | ||||| |||||||||||| |||||| || | Sbjct 53272 TTTTTTGGATGTTAAATACTATTGGATGGGTTACTTTTTATTGGCATTGGAAGCACATCA 53331 Query 186777 CTAGTTGGCAAGGTAATCAGGCACAATTCAATACATCAGGAACATATCTTATGGGTTGGT 186836 | ||||| |||||| ||||||| ||| ||| || ||| | ||||| |||| Sbjct 53332 CATTATGGCAGGGTAATGTTTCACAATTTAATGAATCTTCCACTTATTTGATGGGATGGT 53391 Query 186837 TCAGAGATTATCTCTGGGCGAATAGTGCGCCTGTAATCACAGGGTACACACCATTTGGTA 186896 | ||||||||||| ||| || | | | | |||| || || | || ||||| | Sbjct 53392 TAAGAGATTATCTATGGTTAAACTCTTCACAACTTATCAATGGATATAACCCTTTTGGGA 53451 Query 186897 TGAATAATCTCTCTGTATGGGCATGGATGTTCTTGTTTGGTCATTTAGTTTGGGCAACAG 186956 |||||| | | || || ||||| ||||||||||| || || ||| | |||||||| || | Sbjct 53452 TGAATAGTTTATCGGTTTGGGCGTGGATGTTCTTATTCGGGCATCTTGTTTGGGCTACGG 53511 Query 186957 GATTTATGTTCCTTATTTCTTGGAGAGGTTATTGGCAAGAGTTAATTGAGACTCTTGCTT 187016 ||||||||||| | ||||| ||| | || |||||||| ||||| ||||| ||| | || | Sbjct 53512 GATTTATGTTCTTAATTTCCTGGCGTGGATATTGGCAGGAGTTGATTGAAACTTTAGCAT 53571 Query 187017 GGGCACATCAAAGAACTCCAATAGCAAATATAGCAGGTTGGAGAGATAAACCAGTGGCAC 187076 |||| ||| || | || || | || ||| | | |||||||||||||| ||||| | Sbjct 53572 GGGCTCATGAACGGACACCTTTGGCCAATTTGATTCGATGGAGAGATAAACCGGTGGCTC 53631 Query 187077 TTTCTATTGTTCAAGCAAGACTAGTTGGTTTATCACATTTTGCCATAGGATTTGTGCTTA 187136 |||| ||||| ||||||||| ||||||| ||| | || || || |||| | | | | | Sbjct 53632 TTTCCATTGTGCAAGCAAGATTAGTTGGATTAGCCCACTTCTCCGTAGGTTATATATTCA 53691 Query 187137 CCTATGCACCATTCCTGATAGC 187158 ||||||| | ||| |||| || Sbjct 53692 CCTATGCGGCTTTCTTGATTGC 53713 Score = 524 bits (580), Expect = 1e-143 Identities = 650/890 (73%), Gaps = 0/890 (0%) Strand=Plus/Plus Query 189767 GCATTTATTGCAGCACCACCTGTAGACATTGATGGCATCAGAGAGCCAGTTGCAGGTTCA 189826 || || ||||| || || || ||||| |||||||| || | || || ||| | || || Sbjct 87969 GCCTTCATTGCTGCTCCTCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCT 88028 Query 189827 CTTCTCTATGGTAACAACATCATTTCTGGTGCTGTTGTACCTTCATCAAATGCTATTGGT 189886 || || || || ||||| || ||||||||||| || | ||| | || ||||| || Sbjct 88029 CTACTTTACGGAAACAATATTATTTCTGGTGCCATTATTCCTACTTCTGCAGCTATAGGG 88088 Query 189887 CTACACTTCTACCCAATCTGGGAAGCAGCAACAGTAGATGAGTGGCTTTACAATGGTGGT 189946 | ||||| || ||||| |||||||||||| | || ||||||||| | |||||||||||| Sbjct 88089 TTGCACTTTTATCCAATATGGGAAGCAGCATCTGTTGATGAGTGGTTATACAATGGTGGT 88148 Query 189947 CCTTACCAGTTGGTAATCTTCCACTTCCTTATTGGTATCTCAGCATACATGGGAAGACAG 190006 ||||| || | | | | |||||| | ||||| | | || ||||| | || Sbjct 88149 CCTTATGAGCTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAG 88208 Query 190007 TGGGAATTATCATACAGACTAGGTATGAGACCTTGGATCTGTGTTGCTTATTCAGCACCA 190066 |||||| | | | | || |||||| | |||||||| |||||| |||||||| || Sbjct 88209 TGGGAACTTAGTTTCCGTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCG 88268 Query 190067 GTATCTGCAGCATTTGCAGTATTCCTTGTATACCCATTTGGTCAGGGTTCATTCTCTGAT 190126 || | || || ||| || ||| | | |||||| | ||||| || || |||||| Sbjct 88269 GTTGCGGCGGCTACTGCGGTTTTCTTGATCTACCCAATCGGTCAAGGAAGTTTTTCTGAT 88328 Query 190127 GGTATGCCTTTAGGTATCTCAGGTACATTCAACTTCATGTTTGTATTCCAAGCAGAACAT 190186 ||||||||| |||| || || ||||| |||||||||||| |||||||||| || || || Sbjct 88329 GGTATGCCTCTAGGAATTTCTGGTACTTTCAACTTCATGATTGTATTCCAGGCTGAGCAC 88388 Query 190187 AATATCCTTATGCACCCATTCCATATGGCAGGTGTAGCAGGTATGTTTGGTGGAGCATTA 190246 || ||||||||||||||||| || ||| |||||||| ||| | || || || | || Sbjct 88389 AACATCCTTATGCACCCATTTCACATGTTGGGTGTAGCTGGTGTATTCGGCGGCTCCCTA 88448 Query 190247 TTCTCTGCAATGCATGGTTCACTTGTAACATCTTCTCTAATCAGAGAAACAACTGGTTTA 190306 || ||| ||||||||||| | ||||| ||| | | ||||| ||||| || | Sbjct 88449 TTTAGTGCTATGCATGGTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAAT 88508 Query 190307 GAGTCACAGAACTATGGTTACAAGTTTGGACAAGAAGAAGAAACATACAACATAGTAGCT 190366 || || || | ||||||| || || ||||| |||||||| || || || |||||| Sbjct 88509 GAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCT 88568 Query 190367 GCTCATGGTTACTTTGGTAGACTTATCTTCCAGTATGCTTCATTCAACAACTCAAGAAGT 190426 ||||||||||| |||||| || | |||||||| |||||| ||||| || || | | Sbjct 88569 GCTCATGGTTATTTTGGTCGATTAATCTTCCAATATGCTAGTTTCAATAATTCTCGTTCT 88628 Query 190427 TTACACTTCTTCTTAGCAGTATTCCCTGTAACCTGTGTATGGTTAACATCAATGGGTATT 190486 ||||||||||||||||| | | || ||| || | ||||| || | | |||||| Sbjct 88629 TTACACTTCTTCTTAGCTGCTTGGCCGGTAGTAGGTATTTGGTTTACTGCTTTAGGTATT 88688 Query 190487 TGCACAATGGCATTCAACTTAAATGGTTTCAACTTTAACCAGTCTGTAGTTGATGCACAA 190546 |||| ||||| |||||||||||||||||||| || ||||| |||||||||||| ||| Sbjct 88689 AGCACTATGGCGTTCAACTTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAA 88748 Query 190547 GGTAAAATTGTTCCAACATGGGGCGATGTTCTTAACAGAGCAAACCTTGGTATGGAAGTA 190606 ||| | || || |||| ||| | ||||| | || ||||||||||||||||| Sbjct 88749 GGTCGTGTAATTAATACTTGGGCTGATATCATTAACCGTGCTAACCTTGGTATGGAAGTT 88808 Query 190607 ATGCATGAAAGAAATGCACACAACTTCCCACTAGACCTAGCTTGTGCTGA 190656 ||||||||| | ||||| || |||||||| |||||| ||||| || ||| Sbjct 88809 ATGCATGAACGTAATGCTCATAACTTCCCTCTAGACTTAGCTGCTGTTGA 88858 Score = 381 bits (422), Expect = 7e-101 Identities = 710/1046 (68%), Gaps = 21/1046 (2%) Strand=Plus/Minus Query 190789 AGGTTGGTTTGATGTGCTTGATGACTGGTTAAAACGTGATAGATTTGTATTCATAGGTTG 190848 || || ||||||| | | |||||||||||| | || | || || || ||||||| Sbjct 58158 AGATTTGTTTGATATTATGGATGACTGGTTACGTAGAGACCGTTTCGTTTTTGTAGGTTG 58099 Query 190849 GTCTGGTCTTATATTATTACCATGTGCTTTCCTATCAATTGGTGGTTGGTTCACAGGAAC 190908 ||||||||| | | || || ||||||| | | | || |||||||| || || || Sbjct 58098 GTCTGGTCTATTGCTCTTTCCTTGTGCTTATTTCGCTGTAGGGGGTTGGTTTACGGGTAC 58039 Query 190909 TACATTTGTTACTAGTTGGTATACACATGGAATTGCATCTTCATACCTTGAAGGAGCAAA 190968 || ||||| || |||||||| ||||| | || ||| || | ||||| || Sbjct 58038 GACGTTTGTAACGTCATGGTATACCCATGGGTTGGCCAGTTCCTATTTGGAAGGCTGCAA 57979 Query 190969 CTTTTTGACAGCAGCAGTATCCACACCTGGTGATGCTATGGGTCATAGTTTATTATTCTT 191028 || || || ||||| || || || |||| | || | | | || ||| || || | Sbjct 57978 TTTCTTAACCGCAGCCGTTTCTACTCCTGCTAATAGTTTAGCACACTCTTTGTTGTTGCT 57919 Query 191029 ATGGGGTCCAGAGGCACAAGGTTCATTTGTTCGTTGGTTACAAATTGGTGGACTTTGGAA 191088 |||||||| || |||||||| ||| |||||||| ||| | || || || |||| Sbjct 57918 GTGGGGTCCTGAAGCACAAGGAGATTTTACTCGTTGGTGTCAATTAGGCGGCCTGTGGAC 57859 Query 191089 CTTTGTAGCACTTCATGGTGTATTTGGTCTCATAGGATTCATGTTACGTCAGTTTGAAAT 191148 ||||| || |||||||| | || || || ||||| || |||||||| || || ||| | Sbjct 57858 TTTTGTTGCTCTTCATGGCGCTTTCGGACTAATAGGTTTTATGTTACGCCAATTCGAACT 57799 Query 191149 TGCAGGATTGGTGGGTATTAGACCTTACAATGCTCTTGCTTTTTCTGCTGTCATAGCAGT 191208 ||| ||| || | | ||||| ||||| | || || |||| || || || Sbjct 57798 TGCTCGATCTGTTCAATTGCGCCCTTATAATGCAATCGCATTCTCTGGCCCAATTGCTGT 57739 Query 191209 TTTCACAAGTGTATTCTTAATCTATCCACTTGGTCAGCACAGTTGGTTCTTTGCACCTTC 191268 ||| ||||||| |||| |||||||| || ||| ||||||||||||| ||| Sbjct 57738 TTTTGTTTCTGTATTCCTAATTTATCCACTAGGCCAGTCTGGTTGGTTCTTTGCGCCTAG 57679 Query 191269 ATTTGGAGTTGCAGCAATCTTTAGATATATTCTATTCATTCAAGGTTTCCACAATATTAC 191328 ||||| || ||||| || || ||| || || || ||||||| || || ||| || Sbjct 57678 TTTTGGTGTAGCAGCCATATTCCGATTCATCCTCTTTTTTCAAGGGTTTCATAATTGGAC 57619 Query 191329 ACTCAACCCTTTCCACATGATGGGAGTTGCAGGTATTCTAGGTGGAGCATTACTATGTGC 191388 || |||||||| || |||||||| ||||| ||| | | || | || | |||||||| Sbjct 57618 GCTGAACCCTTTTCATATGATGGGGGTTGCTGGTGTATTGGGCGCCGCTCTGCTATGTGC 57559 Query 191389 CATTCATGGTGCTACAGTACAGAACACCTTGTATGAGGACTCAAGCATCTATACAGATGG 191448 |||||||||||||| ||| | || || || | ||| |||||| Sbjct 57558 TATTCATGGTGCTACCGTAGAAAATACTTTATTTGA------------------AGATGG 57517 Query 191449 TCAAGTTCAAAGTACAACCTTTAGAGCATTTGATCCAACACAGGATGAGGAAACTTATTC 191508 | | | || |||| || | || ||| | ||||| || | ||||||||||||||| Sbjct 57516 TGATGGGGCAAATACA---TTCCGGGCTTTTAACCCAACCCAAGCTGAGGAAACTTATTC 57460 Query 191509 TATGATCACTGCAAACAGATTCTGGTCACAGATATTTGGTATTGCATTCTCTAACAAAAG 191568 ||| |||| || ||| | || ||||| || || ||||| |||| || || || ||| | Sbjct 57459 AATGGTCACCGCTAACCGTTTTTGGTCCCAAATCTTTGGGGTTGCTTTTTCCAATAAACG 57400 Query 191569 ATTTCTACACTTCTTGATGTTGTTTGTTCCTGTAATGGGAATGTGGACATCATCAATAGG 191628 | |||| ||||| ||||| ||||| || |||| || | |||| | | || Sbjct 57399 TTGGTTACATTTCTTTATGTTATTTGTACCAGTAACCGGTTTATGGATGAGTGCTCTTGG 57340 Query 191629 TATTGTAGGTCTTGCACTTAACTTAAGAGCATATGATTTTGTATCTCAAGAGATAAGAGC 191688 | || ||||| || | ||| || | || ||||| || || || || || || | || Sbjct 57339 GGTAGTCGGTCTGGCCTTGAACCTACGTGCCTATGACTTCGTTTCCCAGGAAATCCGTGC 57280 Query 191689 AGCAGAAGACCCAGAGTTTGAAACCTTCTATACTAAGAACATTCTTCTTAATGAAGGTAT 191748 ||| ||||| || || ||||| || ||||| || || || ||||| | || |||||||| Sbjct 57279 AGCCGAAGATCCTGAATTTGAGACTTTCTACACCAAAAATATTCTCTTAAACGAAGGTAT 57220 Query 191749 GAGAGCATGGATGTCTTCAGTAGACCAACCTCATGAGAACTTTGTGTTCCCAGAGGAAGT 191808 | || |||||| | | ||| || |||||||| ||| || | ||||| ||||| || Sbjct 57219 TCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGT 57160 Query 191809 TCTACCTAGAGGAAATGCATTGTAAT 191834 |||||| | ||||| || | |||| Sbjct 57159 TCTACCCCGTGGAAACGCTCTTTAAT 57134 Score = 289 bits (320), Expect = 4e-73 Identities = 452/644 (70%), Gaps = 18/644 (3%) Strand=Plus/Plus Query 183587 GATTTCCTCACCTTTAAAGGTGGTTTGAATCCTGTAACTGGCAGTCTTTGGATGACAGAT 183646 || || || || ||| || || || |||| |||||||| |||| ||| |||| ||| Sbjct 50066 GAATTTCTGACTTTTCGTGGAGGATTAGATCCAGTAACTGGGGGTCTGTGGCTGACCGAT 50125 Query 183647 ATAGCACATCATCACCTAGCAATAGCAGTTATGTTTATCATTGCAGGTCATATGTATCGC 183706 || ||||| ||||| |||| || ||| || | || | || || ||||| |||||| | Sbjct 50126 ATTGCACACCATCATTTAGCTATTGCAATTCTTTTCCTGATAGCGGGTCACATGTATAGA 50185 Query 183707 ACAAACTGGGGTATTGGTCAATCAATGAAAGAGATATTAGATGGTCAGAATGGT---TTC 183763 || || ||||| |||||||| | ||||| || ||||| | ||| || ||| || Sbjct 50186 ACGAATTGGGGCATTGGTCATAGCCTAAAAGATATTTTAGAGGCTCATAAAGGTCCATTT 50245 Query 183764 CCA---CAGGGTGTCACACACAGAGGATTATATGAATTTCTAGCAGAATCAAGACATGCA 183820 || ||||| || | ||| |||||||| ||||| || ||| | ||||| Sbjct 50246 ACAGGCCAGGGG------CATAAAGGCTTATATGAGATTCTAACAACGTCATGGCATGCT 50299 Query 183821 CAACTATCACTGAATCTGGCAATGCTAGGATCTATCAGTATCATAGTTTCACATCATATG 183880 ||| |||| || ||||| || ||| |||| || | | || | || | || |||||| Sbjct 50300 CAATTATCTCTTAATCTAGCTATGTTAGGCTCGTTAACCATTGTTGTAGCTCACCATATG 50359 Query 183881 TATGCAATGCCACCTTATCCATATCTTGGTATTGAATATCCAACAGTAGTAGGATTATTC 183940 ||||| ||||| |||||||||||||| | || ||| ||| || | | ||| || Sbjct 50360 TATGCGATGCCCCCTTATCCATATCTAGCTACTGACTATGGTACCCAACTTTCATTGTTT 50419 Query 183941 ACCCATCATATGTGGATAGGTGGTTTTCTTATTGTGGGTGCATCAGCACATGCTTCAATT 184000 || ||||| |||||||| ||||| ||||| || || ||||| | || ||||| | ||| Sbjct 50420 ACACATCACATGTGGATTGGTGGATTTCTCATAGTTGGTGCTGCTGCGCATGCAGCCATT 50479 Query 184001 GCTATGATAAGAGACTATAATC---CTGTTCAACATATGGGAAATGTATTAGATAGAATA 184057 |||| ||||||| ||| ||| || || | ||| | || |||||||| | | Sbjct 50480 TTTATGGTAAGAGATTATGATCCAACTACTCGATATAACG---ATCTATTAGATCGTGTT 50536 Query 184058 CTTAAATCTAGAGATGCAATCATCAGTCACTTGAACTGGGTATGCATCTTTTTAGGTTTT 184117 |||| | | | ||||||||||| || | ||||||||||| || ||| |||| ||| Sbjct 50537 CTTAGACATCGTGATGCAATCATATCACATCTCAACTGGGTATGTATATTTCTAGGATTT 50596 Query 184118 CATAGTTTTGGTCTTTATATTCACAATGATATTATGAGAGCATTGGGTAGACCTAATGAT 184177 || ||||||||| | |||||||| ||||||| ||||| || || || | || | ||| Sbjct 50597 CACAGTTTTGGTTTATATATTCATAATGATACCATGAGCGCTTTAGGGCGTCCCCAAGAT 50656 Query 184178 CTATTCAGTGATACAGCAATACAATTACAACCTGTATTTGCACA 184221 | || ||||| || |||||||||||||| || || || || Sbjct 50657 ATGTTTTCAGATACCGCGATACAATTACAACCCGTCTTCGCTCA 50700 Score = 210 bits (232), Expect = 3e-49 Identities = 254/342 (74%), Gaps = 8/342 (2%) Strand=Plus/Minus Query 188637 ACCTGTCACAGTTCAGTATCCTTATGAAAAATTAATACCCTCAGAGAGATATAGAGGGAG 188696 |||||| || |||| ||||||||||||||||| ||| |||||||| | | | | || | Sbjct 124288 ACCTGTAACTATTCAATATCCTTATGAAAAATTGATAACCTCAGAGCGGTTTCGTGGTCG 124229 Query 188697 GATACACTATGAGTTTGATAAATGTATTGCTTGTGAAGTATGTGTAAGAGTTTGTCCTAT 188756 ||||||| |||||||||||||||||||||||||||||||||||| | || ||||| || Sbjct 124228 AATACACTTTGAGTTTGATAAATGTATTGCTTGTGAAGTATGTGTTCGTGTATGTCCGAT 124169 Query 188757 TAATTTACCTGTAGTTGATTGGGTAATGAATAAACAAACT-AAGAAGAAGGA--ACTTAG 188813 |||||||||| ||||||||| | | | ||| | | | | || || || ||| Sbjct 124168 AGATTTACCTGTTGTTGATTGGAAATTAGAAAAAGATATTCGAAAAAAACGATTGCTT-- 124111 Query 188814 AAATTATTCAATTGACTTTGGTGCTTGCATTTTCTGTGGGAATTGTGTAGAATACTGTCC 188873 ||||| ||||| || || || || || ||||| |||||||| || || ||||| Sbjct 124110 -AATTACAGCATTGATTTCGGAATCTGTATATTTTGTGGTAATTGTGTTGAGTATTGTCC 124052 Query 188874 AACTAACTGTCTATCCATGACAGAAGAGTATGAACTATCTGTTTTTGACAGACATCAACT 188933 ||| || ||| |||| ||||| ||||| ||||| || ||| || ||| | ||| || | Sbjct 124051 AACAAATTGTTTATCAATGACTGAAGAATATGAGCTTTCTACTTATGATCGTCATGAATT 123992 Query 188934 CAACTATGATAATGTAGCTCTTGGTAGATTACC--TACCAAT 188973 || ||| || | | ||||| ||| | ||||| ||||||| Sbjct 123991 AAATTATAATCAAATTGCTCTGGGTCGTTTACCAATACCAAT 123950 Score = 183 bits (202), Expect = 4e-41 Identities = 189/245 (77%), Gaps = 2/245 (1%) Strand=Plus/Minus Query 182486 ATGTCTCACGCCGTTAAAATATATGATACTTGCATTGGATGCACACAATGTGTGAAGGCT 182545 ||||| || | || || || |||||||| || || || || || |||||||| ||| Sbjct 122087 ATGTCACATTCAGTAAAGATTTATGATACATGTATAGGGTGTACTCAATGTGTTCGAGCT 122028 Query 182546 TGTCCATTGGATGTATTAGAAATGGTTCCTTGGGATGGGTGCAAAGCAAAGCAAATTGCT 182605 || || ||||||||||||||| | |||||||| || || ||||| || ||||| ||| Sbjct 122027 TGCCCCACAGATGTATTAGAAATGATACCTTGGGACGGATGTAAAGCTAAACAAATAGCT 121968 Query 182606 TCCTCACCTAGAACTGAGGATTGTGTAGGATGTAAGAGATGTGAAACAGCATGTCCTACA 182665 || | || ||||||||||| ||||| || ||||||||||| ||| | || ||||| ||| Sbjct 121967 TCTGCCCCAAGAACTGAGGACTGTGTTGGTTGTAAGAGATGCGAATCCGCTTGTCCAACA 121908 Query 182666 GACTTTTTAAGTATTCGTGTTTACTTGGGTGCA-GAAACCACAAGAAGCATGGGTCTAGC 182724 || ||||||||| |||| ||||| || | ||| ||||| || | || ||||||||||| Sbjct 121907 GATTTTTTAAGTGTTCGGGTTTATTTATG-GCATGAAACAACGCGGAGTATGGGTCTAGC 121849 Query 182725 ATATT 182729 |||| Sbjct 121848 TTATT 121844 >seq269878 Length=646 Score = 120 bits (132), Expect = 4e-22 Identities = 115/145 (79%), Gaps = 2/145 (1%) Strand=Plus/Plus Query 182588 AAAGCAAAGCAAATTGCTTCCTCACCTAGAACTGAGGATTGTGTAGGATGTAAGAGATGT 182647 ||||| || ||||| ||||| | || ||||| ||||||||||| || |||||||||||| Sbjct 3 AAAGCCAAACAAATAGCTTCTGCTCCAAGAACAGAGGATTGTGTCGGTTGTAAGAGATGT 62 Query 182648 GAAACAGCATGTCCTACAGACTTTTTAAGTATTCGTGTTTACTTGGGTGCA-GAAACCAC 182706 ||| | || || || ||||| || || ||| |||| ||||| || | ||| |||||||| Sbjct 63 GAATCCGCCTGCCCAACAGATTTCTTGAGTGTTCGAGTTTATTTATG-GCATGAAACCAC 121 Query 182707 AAGAAGCATGGGTCTAGCATATTAA 182731 | ||||||||| |||| |||||| Sbjct 122 CCGCAGCATGGGTATAGCTTATTAA 146 >seq67736 Length=2016 Score = 98.7 bits (108), Expect = 1e-15 Identities = 167/240 (70%), Gaps = 13/240 (5%) Strand=Plus/Minus Query 183686 ATTGCAGGTCATATGTATCGCACAAACTGGGGTATTGGTCAATCAATGAAAGAGATATTA 183745 || || ||| | |||||| | || || ||||| |||||||| | ||||| || ||| Sbjct 2015 ATAGCGGGTAACATGTATAGAACGAATTGGGGCATTGGTCATAGCCTAAAAGATATTTTA 1956 Query 183746 GATGGTCAGAATGGT---TTCCCA---CAGGGTGTCACACACAGAGGATTATATGAATTT 183799 || || || || ||| || || ||||| || | ||| |||||||| || Sbjct 1955 GA-GGCCATAAAGGTCCATTTACAGGCCAGGGG------CATAAAGGCTTATATGAGATT 1903 Query 183800 CTAGCAGAATCAAGACATGCACAACTATCACTGAATCTGGCAATGCTAGGATCTATCAGT 183859 ||| || |||| | ||||| ||| |||| || ||||| | ||| |||| || | | Sbjct 1902 CTAACAACATCATGGCATGCTCAATTATCTCTTAATCTAGTTATGTTAGGCTCGTTAACC 1843 Query 183860 ATCATAGTTTCACATCATATGTATGCAATGCCACCTTATCCATATCTTGGTATTGAATAT 183919 || | || | || |||||||||| ||||| |||||||||||||| | |||||| ||| Sbjct 1842 ATTGTTGTAGCTCACCATATGTATGTGATGCCCCCTTATCCATATCTAGCTATTGACTAT 1783 >seq261419 Length=681 Score = 87.8 bits (96), Expect = 2e-12 Identities = 66/78 (85%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 188701 CACTATGAGTTTGATAAATGTATTGCTTGTGAAGTATGTGTAAGAGTTTGTCCTATTAAT 188760 |||| ||| ||||||||||| |||||||||||||||||||| | || |||||||| || Sbjct 681 CACTTTGAATTTGATAAATGCATTGCTTGTGAAGTATGTGTTCGTGTATGTCCTATAGAT 622 Query 188761 TTACCTGTAGTTGATTGG 188778 || || || ||||||||| Sbjct 621 TTGCCCGTTGTTGATTGG 604 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628998415275200