Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Silene_20latifolia_20subsp._20alba_20[genbank_20GCA_5F001412135.1_20
2015-10-23] 307,720 sequences; 665,278,925 total letters
Query= NC_030240.1
Length=128058
Score E
Sequences producing significant alignments: (Bits) Value
seq11074 84.2 2e-11
>seq11074
Length=8391
Score = 84.2 bits (92), Expect = 2e-11
Identities = 157/231 (68%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 101012 CCGCCTCGCAATCTTAACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCC 101071
||||| || | | ||| || | || | ||| |||||||| || ||||||||||||||
Sbjct 707 CCGCCGCGAAGACGTAAAACAAGATGAAGAGTAGATTCTTTCTGGATATTGTAATCGGCT 648
Query 101072 ATAGTTTTGGAATCTTCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGC 101131
| ||| |||||| | |||||| || ||| | ||||| | |||||| || ||
Sbjct 647 AAAGTACGACCATCTTCAAGTTGTTTACCAGCAAAGATAAGACGTTGTTGATCAGGTGGG 588
Query 101132 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTTGTT 101191
| |||||||||||| || || ||| |||| | | | || |||| || |
Sbjct 587 ATGCCTTCTTTGTCTTGGATCTTGGTTTTGACATTGTCGATTGTGTCTGATGATTCAACT 528
Query 101192 TCGACGGTAATAGTTTTGCCCGTCAATGTTTTAATAAAAATTTGCATTATT 101242
|| | ||| || |||||||| || | ||||| | || || |||||| ||
Sbjct 527 TCTAGGGTTATTGTTTTGCCAGTTAGGGTTTTCACGAATATCTGCATTTTT 477
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 408124433739480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |