Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Silybum_20marianum_20[genbank_20GCA_5F001541825.1_202016-01-26] 258,575 sequences; 1,477,574,977 total letters Query= NC_010811.2 Length=231255 Score E Sequences producing significant alignments: (Bits) Value seq233357 84.2 3e-11 seq211058 84.2 3e-11 seq144798 84.2 3e-11 seq99321 84.2 3e-11 seq57257 84.2 3e-11 seq49801 84.2 3e-11 seq12457 84.2 3e-11 >seq233357 Length=8058 Score = 84.2 bits (92), Expect = 3e-11 Identities = 58/66 (88%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 186537 GTGAGAGGATTCGAACCTCCGACCCCCTGATCCCAAATCAGGTGCGCTAACCAGACTGCG 186596 |||| ||||||||||||| |||||| ||| |||||| ||| |||||| ||||||||||| Sbjct 5927 GTGACAGGATTCGAACCTACGACCCTCTGTACCCAAAACAGATGCGCTGACCAGACTGCG 5868 Query 186597 CTACAC 186602 |||||| Sbjct 5867 CTACAC 5862 >seq211058 Length=9520 Score = 84.2 bits (92), Expect = 3e-11 Identities = 58/66 (88%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 186537 GTGAGAGGATTCGAACCTCCGACCCCCTGATCCCAAATCAGGTGCGCTAACCAGACTGCG 186596 |||| ||||||||||||| |||||| ||| |||||| ||| |||||| ||||||||||| Sbjct 5729 GTGACAGGATTCGAACCTACGACCCTCTGTACCCAAAACAGATGCGCTGACCAGACTGCG 5670 Query 186597 CTACAC 186602 |||||| Sbjct 5669 CTACAC 5664 >seq144798 Length=7859 Score = 84.2 bits (92), Expect = 3e-11 Identities = 58/66 (88%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 186537 GTGAGAGGATTCGAACCTCCGACCCCCTGATCCCAAATCAGGTGCGCTAACCAGACTGCG 186596 |||| ||||||||||||| |||||| ||| |||||| ||| |||||| ||||||||||| Sbjct 2578 GTGACAGGATTCGAACCTACGACCCTCTGTACCCAAAACAGATGCGCTGACCAGACTGCG 2519 Query 186597 CTACAC 186602 |||||| Sbjct 2518 CTACAC 2513 >seq99321 Length=1664 Score = 84.2 bits (92), Expect = 3e-11 Identities = 58/66 (88%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 186537 GTGAGAGGATTCGAACCTCCGACCCCCTGATCCCAAATCAGGTGCGCTAACCAGACTGCG 186596 |||| ||||||||||||| |||||| ||| |||||| ||| |||||| ||||||||||| Sbjct 508 GTGACAGGATTCGAACCTACGACCCTCTGTACCCAAAACAGATGCGCTGACCAGACTGCG 449 Query 186597 CTACAC 186602 |||||| Sbjct 448 CTACAC 443 >seq57257 Length=8262 Score = 84.2 bits (92), Expect = 3e-11 Identities = 58/66 (88%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 186537 GTGAGAGGATTCGAACCTCCGACCCCCTGATCCCAAATCAGGTGCGCTAACCAGACTGCG 186596 |||| ||||||||||||| |||||| ||| |||||| ||| |||||| ||||||||||| Sbjct 5117 GTGACAGGATTCGAACCTACGACCCTCTGTACCCAAAACAGATGCGCTGACCAGACTGCG 5176 Query 186597 CTACAC 186602 |||||| Sbjct 5177 CTACAC 5182 >seq49801 Length=5399 Score = 84.2 bits (92), Expect = 3e-11 Identities = 58/66 (88%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 186537 GTGAGAGGATTCGAACCTCCGACCCCCTGATCCCAAATCAGGTGCGCTAACCAGACTGCG 186596 |||| ||||||||||||| |||||| ||| |||||| ||| |||||| ||||||||||| Sbjct 1710 GTGACAGGATTCGAACCTACGACCCTCTGTACCCAAAACAGATGCGCTGACCAGACTGCG 1651 Query 186597 CTACAC 186602 |||||| Sbjct 1650 CTACAC 1645 >seq12457 Length=7091 Score = 84.2 bits (92), Expect = 3e-11 Identities = 58/66 (88%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 186537 GTGAGAGGATTCGAACCTCCGACCCCCTGATCCCAAATCAGGTGCGCTAACCAGACTGCG 186596 |||| ||||||||||||| |||||| ||| |||||| ||| |||||| ||||||||||| Sbjct 2620 GTGACAGGATTCGAACCTACGACCCTCTGTACCCAAAACAGATGCGCTGACCAGACTGCG 2679 Query 186597 CTACAC 186602 |||||| Sbjct 2680 CTACAC 2685 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 737496543255000