Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Silybum_20marianum_20[genbank_20GCA_5F001541825.1_202016-01-26] 258,575 sequences; 1,477,574,977 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq31517 89.7 4e-13 >seq31517 Length=16670 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||| || ||||| || ||| | || || || ||||| || | || |||| | Sbjct 3479 ATGCAGATCTTTGTGAAGACTCTGACTGGGAAGACCATCACTTTGGAGGTGGAGAGTTCG 3538 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 |||||| | | | | || || ||||||| ||||| ||||| | || ||||||| Sbjct 3539 GATACTATTGACAATGTCAAGGCAAAGATTCAGGATAAGGAAGGGATCCCACCGGATCAG 3598 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 ||||| | || | ||| ||||| ||||| ||||||| | || | || |||||||| Sbjct 3599 CAGAGGTTGATCTTTGCTGGTAAGCAGCTCGAGGACGGCCGTACCCTTGCTGACTACAAT 3658 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGT 107764 ||||| ||||| || || | ||| |||| Sbjct 3659 ATTCAGAAGGAATCAACCCTTCACTTGGT 3687 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397619786508175