Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Silybum_20marianum_20[genbank_20GCA_5F001541825.1_202016-01-26] 258,575 sequences; 1,477,574,977 total letters Query= NC_023611.1 Length=198533 Score E Sequences producing significant alignments: (Bits) Value seq101841 82.4 1e-10 >seq101841 Length=19894 Score = 82.4 bits (90), Expect = 1e-10 Identities = 130/184 (71%), Gaps = 2/184 (1%) Strand=Plus/Minus Query 193443 ATACCTGAAATAGGGGATAAATTTTGTTC-AGGAATGGCCCAAAAAGGAACTTGTGGTAT 193501 |||||| |||| || ||||| ||| || ||| | || | |||||||||| ||| || Sbjct 8284 ATACCTCAAATCGGAGATAAGTTTAGTAGTAGGCACGGTC-AAAAAGGAACCGTTGGCAT 8226 Query 193502 GATTTATTCACAAGAAGATATGCCATTTACAGCTTCAGGTATGGTACCAGATATTATTAT 193561 || |||| | |||||||| ||||| | || | ||| || ||| ||||||||| | Sbjct 8225 GACTTATACGCAAGAAGACATGCCGTGGACCGTGGAAGGCATTACACCCGATATTATTGT 8166 Query 193562 TAATCCAAATTGTATTCCATCCAGAATGACCATTAATCAAATTATTGCCACTGTTATGGG 193621 || || || |||||| || ||||||| ||| ||| |||||| | ||||||| Sbjct 8165 GAACCCGCATGCTATTCCTTCTCGAATGACGATTGGTCAGCTTATTGAGTGTATTATGGG 8106 Query 193622 CAAA 193625 ||| Sbjct 8105 GAAA 8102 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633124586901000