Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Silybum_20marianum_20[genbank_20GCA_5F001541825.1_202016-01-26] 258,575 sequences; 1,477,574,977 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq31517 86.0 6e-12 >seq31517 Length=16670 Score = 86.0 bits (94), Expect = 6e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 131914 AACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTC 131973 |||||| || | | |||| || || ||||| |||||||| | |||||| || || Sbjct 3688 AACCAAGTGAAGGGTTGATTCCTTCTGAATATTGTAGTCAGCAAGGGTACGGCCGTCCTC 3629 Query 131974 GAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGT 132033 |||||| ||||| | | |||| | | ||| ||||| || || || ||||| ||||| Sbjct 3628 GAGCTGCTTACCAGCAAAGATCAACCTCTGCTGATCCGGTGGGATCCCTTCCTTATCCTG 3569 Query 132034 AATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTT 132093 ||| ||| || | | || | |||||| | |||||| || | || | || || Sbjct 3568 AATCTTTGCCTTGACATTGTCAATAGTATCCGAACTCTCCACCTCCAAAGTGATGGTCTT 3509 Query 132094 ACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 ||||||||||| || | || |||||||| Sbjct 3508 CCCAGTCAGAGTCTTCACAAAGATCTGCAT 3479 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475070703237000