Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Silybum_20marianum_20[genbank_20GCA_5F001541825.1_202016-01-26]
258,575 sequences; 1,477,574,977 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq138370 179 9e-40
seq31517 165 2e-35
seq40372 158 3e-33
seq38170 158 3e-33
seq33895 109 1e-18
seq43181 98.7 2e-15
seq19165 98.7 2e-15
seq157746 96.9 8e-15
seq558 95.1 3e-14
seq248378 93.3 1e-13
seq126203 93.3 1e-13
seq115275 93.3 1e-13
seq93860 93.3 1e-13
seq23321 93.3 1e-13
seq43476 87.8 4e-12
>seq138370
Length=13449
Score = 179 bits (198), Expect = 9e-40
Identities = 173/222 (78%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952
|||||| | ||||| | || |||||||||||||| |||||||| ||||| || |||||
Sbjct 5060 ACGAAGACGGAGGACCAAATGGAGAGTGGACTCTTTCTGGATGTTGTAATCAGCCAGGGT 5001
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012
| || || || || || || || ||||| || || | ||||||||| || || | ||
Sbjct 5000 TCGGCCGTCCTCGAGTTGTTTTCCGGCGAAAATGAGCCTTTGTTGGTCTGGGGGGATGCC 4941
Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072
||| ||||| |||||||| ||| ||||| || |||||||||||||||||||| || |
Sbjct 4940 TTCTTTGTCTTGGATCTTAGCTTTGACGTTATCAATGGTGTCAGAGCTTTCAACTTCCAA 4881
Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|||||| || ||||| ||||| ||||| || || | ||||||
Sbjct 4880 AGTGATGGTTTTTCCGGTGAGGGTCTTAACGAAAATCTGCAT 4839
Score = 178 bits (196), Expect = 3e-39
Identities = 173/223 (78%), Gaps = 0/223 (0%)
Strand=Plus/Minus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952
|||||| | || ||||| ||||||||||||||||| ||||| |||||||| ||||| ||
Sbjct 5516 ACGAAGACGAAGAACAAGATGAAGAGTGGACTCTTTCTGGATATTATAATCAGCAAGTGT 5457
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012
||| |||||||||| || || || || ||||| | | || ||||| || || | |||
Sbjct 5456 CCTCCCATCTTCCAATTGTTTACCAGCAAAGATCAACCTCTGCTGGTCCGGTGGGATTCC 5397
Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072
||||| ||||| ||||| ||||| || || ||||| || |||||||| ||||| |
Sbjct 5396 CTCCTTATCCTGAATCTTCGCCTTCACATTATCAATGGTATCCGAGCTTTCCACCTCCAA 5337
Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115
||| ||||||||||| || | ||||| || || | |||||||
Sbjct 5336 AGTAATCGTCTTTCCGGTTAATGTCTTAACGAAAATCTGCATT 5294
Score = 168 bits (186), Expect = 2e-36
Identities = 167/216 (77%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958
||| || ||||| ||||| ||||| ||||||||||| || ||||| || | || | ||
Sbjct 4826 TCTGAGAACAAGATGAAGGGTGGATTCTTTTTGGATATTGTAATCGGCTAAAGTACGGCC 4767
Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018
||||| |||||||| || || |||||||| | ||| ||||| || |||| ||||| ||
Sbjct 4766 GTCTTCAAGCTGCTTTCCGGCAAAGATAAGTCTTTGCTGGTCTGGTGGAATGCCTTCTTT 4707
Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078
||| |||||||| || ||||| || || ||||| || || || || || ||||||||
Sbjct 4706 GTCTTGGATCTTGGCCTTGACGTTGTCTATTGTGTCGGAACTCTCGACTTCAAGAGTGAT 4647
Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|||||||| ||||| ||||| ||||| | |||||
Sbjct 4646 TGTCTTTCCGGTGAGGGTCTTAACAAAGATTTGCAT 4611
Score = 158 bits (174), Expect = 3e-33
Identities = 162/212 (76%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| |||||||| || || || || || |||||||| ||||| || | || | ||||||
Sbjct 5278 AGCACAAGGTGGAGGGTAGATTCCTTCTGGATGTTGTAATCAGCCAAAGTGCGACCATCT 5219
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|||||||| || || || |||||||| | ||||| || || || | ||||||||| ||
Sbjct 5218 TCCAGCTGTTTTCCAGCAAAGATAAGCCTCTGTTGATCTGGTGGGATTCCTTCCTTATCT 5159
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| ||||||||| || |||||||| ||||| || || || | ||| ||||||
Sbjct 5158 TGGATCTTAGCTTTCACGTTATCAATGGTGTCCGAGCTCTCGACTTCCAAAGTAATCGTC 5099
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || || | ||||| || || | ||||||
Sbjct 5098 TTCCCGGTCAATGTCTTAACGAAAATCTGCAT 5067
>seq31517
Length=16670
Score = 165 bits (182), Expect = 2e-35
Identities = 166/216 (77%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958
||| ||||||||||| || |||||||||||||||||||| ||||| || | || | ||
Sbjct 2554 TCTGAGGACAAGGTGGAGTGTGGACTCTTTTTGGATGTTGTAATCGGCCAAAGTACGGCC 2495
Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018
|| || || ||||| || || ||||| | | ||| || || ||||||| |||||||||
Sbjct 2494 GTCCTCGAGTTGCTTTCCGGCAAAGATCAATCTTTGCTGATCTGGAGGAATTCCTTCCTT 2435
Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078
|| ||||| || || ||||| || || || |||||||| || ||||||||||| ||
Sbjct 2434 ATCTTGGATTTTGGCCTTGACGTTATCAATTGTATCAGAGCTCTCGACCTCGAGAGTAAT 2375
Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|||||||| || || || || || || | ||||||
Sbjct 2374 GGTCTTTCCAGTTAGGGTTTTCACGAAGATCTGCAT 2339
Score = 163 bits (180), Expect = 7e-35
Identities = 165/215 (77%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 210900 CTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCA 210959
|| ||||| | |||||| || || || |||||||| || ||||| || || || | ||
Sbjct 2781 CTGAGGACCAAGTGAAGGGTCGATTCCTTTTGGATATTGTAATCGGCTAGAGTACGACCG 2722
Query 210960 TCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTG 211019
||||| || ||||| || |||||||| | | || ||||| ||||| | ||||||||||
Sbjct 2721 TCTTCGAGTTGCTTTCCGGCGAAGATCAATCTCTGCTGGTCTGGAGGGATTCCTTCCTTG 2662
Query 211020 TCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATC 211079
||||||||||| ||||||||| ||||| |||||||| || || || || | |||||
Sbjct 2661 TCCTGGATCTTGGCTTTCACGTTATCGATAGTGTCAGAACTCTCGACTTCCAAGGTGATT 2602
Query 211080 GTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|||||||| ||||| || || || || | |||||
Sbjct 2601 GTCTTTCCGGTGAGGGTTTTGACGAAGATTTGCAT 2567
Score = 152 bits (168), Expect = 1e-31
Identities = 161/212 (76%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| || | ||| ||||| || || || || ||||| || || ||||| || | |||||
Sbjct 3462 AGAACCAAGTGTAGAGTCGATTCCTTCTGAATGTTGTAGTCAGCAAGCGTACGACCATCC 3403
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| |||||||| ||||| ||||| | | || || || || || | |||||||||||
Sbjct 3402 TCGAGCTGCTTACCTGCAAAGATCAATCTCTGCTGATCTGGTGGGATCCCTTCCTTGTCT 3343
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
||||||||| || ||||| ||||| || |||||||| |||||||| | |||||| |||
Sbjct 3342 TGGATCTTTGCCTTAACGTTATCGATAGTATCAGAGCTCTCAACCTCCAAAGTGATTGTC 3283
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||||| || | ||||| ||||| | ||||||
Sbjct 3282 TTTCCAGTCAACGTCTTAACAAAGATCTGCAT 3251
Score = 150 bits (166), Expect = 4e-31
Identities = 161/213 (76%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| || | |||||| || || || || ||||||||||| || || || || | || |||
Sbjct 3006 AGAACCAAGTGAAGGGTTGATTCCTTCTGGATGTTATAGTCGGCTAGAGTACGGCCGTCT 2947
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| ||||| ||||| || ||||| | | || ||||| || |||| |||||||| ||
Sbjct 2946 TCAAGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGAATACCTTCCTTATCT 2887
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| ||||||||| || ||||| || ||||||||||| || | ||| || |||
Sbjct 2886 TGGATCTTGGCTTTCACGTTATCAATGGTATCCGAGCTTTCAACTTCCAAAGTTATGGTC 2827
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115
||||| || || ||||| || || | ||||||
Sbjct 2826 TTTCCAGTCAGGGTCTTAACGAAGATTTGCATT 2794
Score = 150 bits (166), Expect = 4e-31
Identities = 155/203 (76%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 210912 TGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGC 210971
||||||||||| || || || || || || || ||||| |||||||||||||| ||||||
Sbjct 3225 TGAAGAGTGGATTCCTTCTGAATATTGTAGTCAGCAAGTGTCCTTCCATCTTCAAGCTGC 3166
Query 210972 TTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTT 211031
|| || || ||||| | | || ||||| || || | || ||||| || |||||||||
Sbjct 3165 TTACCAGCAAAGATTAACCTCTGCTGGTCTGGTGGGATACCCTCCTTATCTTGGATCTTT 3106
Query 211032 TGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTG 211091
|| || || || |||||||| || || |||||||| | |||||| |||||||| ||
Sbjct 3105 GCCTTAACATTGTCTATGGTGTCTGAACTCTCAACCTCCAAAGTGATGGTCTTTCCGGTC 3046
Query 211092 AGAGTCTTTACAAACACCTGCAT 211114
| ||||| || || | ||||||
Sbjct 3045 AATGTCTTAACGAAGATCTGCAT 3023
>seq40372
Length=8222
Score = 158 bits (174), Expect = 3e-33
Identities = 163/212 (77%), Gaps = 1/212 (0%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
||||| ||||||||||| || || || |||||||||||||| || ||||| || || |||
Sbjct 1275 AGGACGAGGTGAAGAGTTGATTCCTTCTGGATGTTATAATCAGCTAGGGTTCTGCCGTCT 1334
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
||||| || || |||||||| || |||||||| || ||||||| ||||| |||||
Sbjct 1335 CTTAGCTGTTTCCCGGCGAAGATGAGCCGTTGTTGATCTGGAGGAATGCCTTCTTTGTCT 1394
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
||||| || ||| || || ||||| || ||||| || || | ||| ||||| || ||
Sbjct 1395 TGGATTTTGGCTTTGACATTATCGATTGTATCAGAACTCTCTA-CTCCAGAGTAATGGTT 1453
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||||| || || || || || || | ||||||
Sbjct 1454 TTTCCAGTAAGGGTTTTCACGAAGATCTGCAT 1485
Score = 122 bits (134), Expect = 2e-22
Identities = 160/216 (74%), Gaps = 7/216 (3%)
Strand=Plus/Plus
Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958
||| || || || || | || || || ||||| || || |||||||| ||| || | |
Sbjct 821 TCTCAGAACCAGATGCAACGTAGATTCCTTTTG-ATATTGTAATCCGCTAGGTTC--TGC 877
Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018
|||||||| ||| ||||| |||||||| | || || || || ||||||| || |||||
Sbjct 878 ATCTTCCAACTGTTTGCCGGCGAAGATCAAACGCTGCTGATCTGGAGGAATACCCTCCTT 937
Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078
|||||| ||||| |||||||| | || || ||||| ||||||||||| | || ||
Sbjct 938 GTCCTGAATCTTGGCCTTCACGTTAT--ATTGTATCAGAACTTTCAACCTCCAACGTAAT 995
Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| |||||||| | || || || || | ||||||
Sbjct 996 -GTTTTTCCCGTTAATGT-TTCACGAAGATCTGCAT 1029
Score = 91.5 bits (100), Expect = 3e-13
Identities = 159/218 (73%), Gaps = 10/218 (5%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
||||| || ||||| || || |||| | ||||||| || || || ||| || | || |||
Sbjct 1046 AGGACGAGATGAAGCGTTGATTCTTCT-GGATGTTGTAGTC-GCTAGGTTC-TGCCGTCT 1102
Query 210963 TCCAGCTGCTTGCCT-GCGAAGATAAGGCGTTGTTGG-TCAG-GAGGAACTCCTTCCTTG 211019
|||| |||||| || |||||||| || || || || || | | |||| | |||| |||
Sbjct 1103 TCCAACTGCTTTCCGCGCGAAGATGAGCCGCTGCTGAATCCGTGTGGAA-TACTTCTTTG 1161
Query 211020 TCCTGGATCTTTTGTTTCACGTTTTCGATG-GTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078
||||||||||| || ||||| || ||| ||||| || || || ||||| | || ||
Sbjct 1162 TCCTGGATCTTGGCCTTGACGTTGTCTATGCGTGTCGGAACTCTCGACCTCCAAGGTAAT 1221
Query 211079 CG-TCTTTCCCGTGAGAGTCTTTAC-AAACACCTGCAT 211114
| |||| || || || || || || || | ||||||
Sbjct 1222 GGCTCTTGCCGGTTAGGGTTTTGACGGAAAATCTGCAT 1259
>seq38170
Length=7308
Score = 158 bits (174), Expect = 3e-33
Identities = 164/215 (76%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
||||||||||| || ||||| || || |||||||| || || | ||||| || || ||
Sbjct 6461 AGGACAAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCGGATAGGGTTCTGCCGCCT 6520
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| ||||| || || || ||||| || ||||||||||| || || | ||||| |||||
Sbjct 6521 TCGAGCTGTTTTCCGGCAAAGATGAGACGTTGTTGGTCCGGTGGGATACCTTCTTTGTCT 6580
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| ||| || || ||||||||||||||| ||||||||| || || || ||
Sbjct 6581 TGGATCTTGGCTTTGACATTGTCGATGGTGTCAGAGGATTCAACCTCTAGGGTTATGGTT 6640
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117
||| | || || || || || || | |||||| ||
Sbjct 6641 TTTTCAGTTAGGGTTTTCACGAAGATCTGCATCTT 6675
>seq33895
Length=17743
Score = 109 bits (120), Expect = 1e-18
Identities = 167/227 (74%), Gaps = 12/227 (5%)
Strand=Plus/Minus
Query 210899 TCTTAGGACAAGGTGAAGAGTGGA-CTCTTTTTGGATGTTATAATCCGCAAGGGTCCTT- 210956
||| || ||||| ||||||||| | ||| | ||||||| ||||||||||| ||||
Sbjct 11102 TCTAAGCACAAGATGAAGAGTGATTCGCTTCTGGGATGTTGTAATCCGCAAGAGTCCAGG 11043
Query 210957 CCATCTTCCAGCTGC--TTGCCTGCGAAGATAAGGCGTTGTTGG-TCAGGAGGAACTCCT 211013
|||||||| ||||| || || ||||| || || ||||||||| || || || | ||||
Sbjct 11042 CCATCTTCAAGCTGTATTTTCCGGCGAAAATCAGTCGTTGTTGGGTCTGGTGGGATTCCT 10983
Query 211014 TCCTTGTCCT--GGATCTTTTGTTTCA--CGTTTTCGATGGTGTCAGAGCTTTCAACCTC 211069
| |||| || | ||||| | | | |||| | |||| |||||||||||| || ||
Sbjct 10982 -CTTTGTTCTATGAATCTTGGCTCTTAAGCGTTGACAATGGGGTCAGAGCTTTCGACTTC 10924
Query 211070 GAGAGTGATCGTCTTTCCCGTG-AGAG-TCTTTACAAACACCTGCAT 211114
| |||||| ||||| || ||| || | | || || || | ||||||
Sbjct 10923 CAAAGTGATGGTCTTACCGGTGTAGGGTTGTTGACGAAAATCTGCAT 10877
>seq43181
Length=12838
Score = 98.7 bits (108), Expect = 2e-15
Identities = 86/107 (80%), Gaps = 0/107 (0%)
Strand=Plus/Minus
Query 211011 CCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCG 211070
|||||||| ||||| ||||| ||| || || |||||||||||| ||| |||||||||
Sbjct 3568 CCTTCCTTATCCTGAATCTTAGCTTTGACATTATCGATGGTGTCACTGCTCTCAACCTCG 3509
Query 211071 AGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117
|||||||| ||||| || || || || || ||||| | |||||| ||
Sbjct 3508 AGAGTGATGGTCTTCCCGGTTAGGGTTTTCACAAAGATCTGCATCTT 3462
>seq19165
Length=30349
Score = 98.7 bits (108), Expect = 2e-15
Identities = 86/107 (80%), Gaps = 0/107 (0%)
Strand=Plus/Plus
Query 211011 CCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCG 211070
|||||||||||||| ||||| ||| || || ||||||||||| ||| |||||||||
Sbjct 12386 CCTTCCTTGTCCTGAATCTTAGCTTTGACATTGTCGATGGTGTCGCTGCTCTCAACCTCG 12445
Query 211071 AGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117
|||||||| ||||| || || || || || ||||| | |||||| ||
Sbjct 12446 AGAGTGATGGTCTTCCCGGTTAGGGTTTTCACAAAGATCTGCATCTT 12492
>seq157746
Length=3754
Score = 96.9 bits (106), Expect = 8e-15
Identities = 88/111 (79%), Gaps = 0/111 (0%)
Strand=Plus/Minus
Query 211007 AACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAAC 211066
||| |||||||||||||| || | ||| || || |||||||||||| ||| |||||
Sbjct 391 AACACCTTCCTTGTCCTGAATTCTAGCTTTGACATTGTCGATGGTGTCACTGCTCTCAAC 332
Query 211067 CTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117
|||||||||||| ||||| || || || || || ||||| | |||||| ||
Sbjct 331 CTCGAGAGTGATGGTCTTCCCGGTTAGGGTTTTCACAAAGATCTGCATCTT 281
>seq558
Length=19527
Score = 95.1 bits (104), Expect = 3e-14
Identities = 147/209 (70%), Gaps = 6/209 (3%)
Strand=Plus/Minus
Query 139810 CCAAAGAAGCACGGAAGAGGAGGACAATCTGCTCTGCGTTTTGAAAGACTTCGAAAGGAA 139869
|| |||||||||||||||||||| || || ||||| ||||||| | | ||||||| ||||
Sbjct 16522 CCGAAGAAGCACGGAAGAGGAGGGCAGTCAGCTCTTCGTTTTGCACGTCTTCGAATGGAA 16463
Query 139870 AAGAGGCACAACTACTTGAGAAAAGTTGCAGAGAACGCAATACAGTGTTTTATCAA---A 139926
||| | ||||| ||| |||| || || || |||| ||||| || |||||| |
Sbjct 16462 AAGCGTCACAATTACGTGAGGAAGACAGCTGAACTTGCAACACAGTTTTATATCAATCCA 16403
Query 139927 GACAACA---AGTGTTTTGTTTCTGGTATTGTTTTGGCAGGTTCCGCAGAGTTCAAGACA 139983
| || | || ||||||||| || | | || || || || || ||||||||
Sbjct 16402 GCCACTAGTCAGCCGAATGTTTCTGGACTTATACTTGCTGGATCTGCTGATTTCAAGACC 16343
Query 139984 AAGCTCCTGGAATCTGACTTTTTTGACCC 140012
|||| ||||||| | ||||| ||
Sbjct 16342 GAGCTGAGCCAATCTGATATGTTTGATCC 16314
>seq248378
Length=9897
Score = 93.3 bits (102), Expect = 1e-13
Identities = 83/104 (80%), Gaps = 0/104 (0%)
Strand=Plus/Plus
Query 211011 CCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCG 211070
|||||||| ||||| ||||| ||| || || |||||||||||| ||| |||||||||
Sbjct 4916 CCTTCCTTATCCTGAATCTTAGCTTTGACATTATCGATGGTGTCACTGCTCTCAACCTCG 4975
Query 211071 AGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|||||||| ||||| || || || || || || || | ||||||
Sbjct 4976 AGAGTGATGGTCTTCCCGGTTAGGGTTTTCACGAAAATCTGCAT 5019
>seq126203
Length=1671
Score = 93.3 bits (102), Expect = 1e-13
Identities = 83/104 (80%), Gaps = 0/104 (0%)
Strand=Plus/Plus
Query 211011 CCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCG 211070
|||||||| ||||| ||||| ||| || || |||||||||||| ||| |||||||||
Sbjct 452 CCTTCCTTATCCTGAATCTTAGCTTTGACATTATCGATGGTGTCACTGCTCTCAACCTCG 511
Query 211071 AGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|||||||| ||||| || || || || || || || | ||||||
Sbjct 512 AGAGTGATGGTCTTCCCGGTTAGGGTTTTCACGAAAATCTGCAT 555
>seq115275
Length=14388
Score = 93.3 bits (102), Expect = 1e-13
Identities = 92/119 (77%), Gaps = 0/119 (0%)
Strand=Plus/Minus
Query 139807 CTTCCAAAGAAGCACGGAAGAGGAGGACAATCTGCTCTGCGTTTTGAAAGACTTCGAAAG 139866
||||| ||||| || |||||||||||||||||||| |||| |||| | | |||| |
Sbjct 9132 CTTCCCAAGAAACATGGAAGAGGAGGACAATCTGCATTGCGATTTGCTCGTTTACGAATG 9073
Query 139867 GAAAAGAGGCACAACTACTTGAGAAAAGTTGCAGAGAACGCAATACAGTGTTTTATCAA 139925
|| || ||||||||||| | |||||| || ||| ||||| ||||| ||||||||
Sbjct 9072 GAGAAAAGGCACAACTATGTTAGAAAAACAGCCGAGCTCGCAACACAGTTCTTTATCAA 9014
>seq93860
Length=15029
Score = 93.3 bits (102), Expect = 1e-13
Identities = 83/104 (80%), Gaps = 0/104 (0%)
Strand=Plus/Plus
Query 211011 CCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCG 211070
|||||||| ||||| ||||| ||| || || |||||||||||| ||| |||||||||
Sbjct 8168 CCTTCCTTATCCTGAATCTTAGCTTTGACATTATCGATGGTGTCACTGCTCTCAACCTCG 8227
Query 211071 AGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|||||||| ||||| || || || || || || || | ||||||
Sbjct 8228 AGAGTGATGGTCTTCCCGGTTAGGGTTTTCACGAAAATCTGCAT 8271
>seq23321
Length=5359
Score = 93.3 bits (102), Expect = 1e-13
Identities = 83/104 (80%), Gaps = 0/104 (0%)
Strand=Plus/Minus
Query 211011 CCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCG 211070
|||||||| ||||| ||||| ||| || || |||||||||||| ||| |||||||||
Sbjct 1649 CCTTCCTTATCCTGAATCTTAGCTTTGACATTATCGATGGTGTCACTGCTCTCAACCTCG 1590
Query 211071 AGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|||||||| ||||| || || || || || || || | ||||||
Sbjct 1589 AGAGTGATGGTCTTCCCGGTTAGGGTTTTCACGAAAATCTGCAT 1546
>seq43476
Length=21127
Score = 87.8 bits (96), Expect = 4e-12
Identities = 83/106 (78%), Gaps = 0/106 (0%)
Strand=Plus/Minus
Query 211012 CTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGA 211071
||||||||| |||||||| ||| || || |||||| |||| ||| ||||||||||
Sbjct 9456 CTTCCTTGTTTTGGATCTTAGCTTTGACATTGTCGATGCTGTCGTTGCTCTCAACCTCGA 9397
Query 211072 GAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117
||||||| ||||| || || || || || || || | |||||||||
Sbjct 9396 GAGTGATGGTCTTCCCGGTTAGGGTTTTGACGAAGATCTGCATTTT 9351
Score = 86.0 bits (94), Expect = 1e-11
Identities = 83/107 (78%), Gaps = 0/107 (0%)
Strand=Plus/Minus
Query 211011 CCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCG 211070
||||||||||| | |||||| ||| || || ||||||||||| ||| |||||||||
Sbjct 11160 CCTTCCTTGTCTTAGATCTTAGCTTTGACATTGTCGATGGTGTCGCTGCTCTCAACCTCG 11101
Query 211071 AGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117
||||||| ||||| || || || || || | || | |||||||||
Sbjct 11100 CGAGTGATGGTCTTCCCGGTTAGGGTTTTGATGAAGATCTGCATTTT 11054
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1155311738479875
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |