Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sisymbrium_20irio_20[genbank_20GCA_5F000411075.1_202013-06-14]
21,357 sequences; 245,550,082 total letters
Query= NC_002169.1
Length=135611
Score E
Sequences producing significant alignments: (Bits) Value
seq20422 172 5e-38
seq19979 161 9e-35
seq18898 138 1e-27
seq20655 129 5e-25
seq19059 129 5e-25
seq19630 122 8e-23
seq19135 93.3 4e-14
seq19364 86.0 5e-12
seq19776 82.4 7e-11
>seq20422
Length=233597
Score = 172 bits (190), Expect = 5e-38
Identities = 179/232 (77%), Gaps = 2/232 (1%)
Strand=Plus/Minus
Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571
||||| || | | |||||||||||| | ||||||||| || ||||||||||| |||
Sbjct 131365 CCTCCACGCAGACGCAACACCAAGTGAAGTGTAGACTCCTTCTGAATGTTGTAGTCGGCT 131306
Query 118572 ATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGT 118631
| |||||| |||||||||||| ||||||||| |||||||||||||||| || |||||
Sbjct 131305 AAAGTGCGACCATCCTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCTGGAGGA 131246
Query 118632 ATGCCCTCCTTGT-CTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGAC 118690
|| || ||||| | |||| || || || || | |||| |||||| | |||||| ||
Sbjct 131245 ATACCTTCCTTATCCTGT-ATCTTGGCCTTGACGTTATCGATGGTGTCAGAGCTCTCTAC 131187
Query 118691 CTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 118742
||||| ||| | || || || |||| || || ||||| ||||||||| ||
Sbjct 131186 CTCGAGGGTTATTGTCTTACCAGTCAAGGTCTTGACAAAGATCTGCATGCCT 131135
Score = 161 bits (178), Expect = 9e-35
Identities = 172/227 (76%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571
||||| || | | |||||||||||| | |||||||| || ||||| ||||||||| |
Sbjct 131137 CCTCCACGCAGACGCAACACCAAGTGAAGCGTAGACTCCTTCTGAATATTGTAATCGGCC 131078
Query 118572 ATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGT 118631
| |||||| |||||| ||||| ||||||||| ||||||||||||||||||| |||||
Sbjct 131077 AAAGTGCGACCATCCTCAAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGATCCGGAGGA 131018
Query 118632 ATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACC 118691
|| ||||| ||||| || || |||||| | || | ||||| | ||| || |||
Sbjct 131017 ATACCCTCTTTGTCCTGGATCTTGGCTTTAACGTTGTCAATAGTGTCGGAGCTTTCAACC 130958
Query 118692 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| | || | || || || ||||| || || ||||| ||||||||
Sbjct 130957 TCCAAAGTGATAGTCTTTCCCGTCAGGGTCTTGACAAAGATCTGCAT 130911
Score = 132 bits (146), Expect = 4e-26
Identities = 157/213 (74%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589
|||||||| | || ||||| || ||||||||||| ||| | ||||| ||||||
Sbjct 131575 ACCAAGTGAAGGGTCGACTCCTTCTGAATGTTGTAGTCGGCTAAGGTGCGACCATCCTCA 131516
Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649
||||| |||||||| |||||||||||||||| || ||||| ||||| ||||| ||
Sbjct 131515 AGCTGCTTTCCAGCAAAGATGAGACGCTGCTGGTCCGGAGGGATGCCTTCCTTATCCTGG 131456
Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709
|| || || || | || | ||||| | |||||| ||||| | || | || |||
Sbjct 131455 ATCTTGGCCTTCACGTTATCAATCGTGTCGGAGCTCTCCACCTCCAGTGTGATGGTCTTG 131396
Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 118742
||||| || || || ||||| ||||||||| ||
Sbjct 131395 CCGGTAAGCGTCTTCACAAAGATCTGCATGCCT 131363
Score = 122 bits (134), Expect = 8e-23
Identities = 145/197 (74%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601
|| ||||| |||||||||||||| ||| | ||||| || |||||||| || |||
Sbjct 130651 GTCGACTCCTTTTGAATGTTGTAGTCGGCTAAGGTGCGACCGTCTTCGAGCTGCTTGCCA 130592
Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661
||| ||||||| | ||||||||| ||||| || ||||| || || || ||| ||
Sbjct 130591 GCGAAGATGAGCCTCTGCTGATCCGGAGGGATACCCTCTTTATCCTGGATCTTTGCCTTG 130532
Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721
|| | |||| |||||| | ||| || ||||| | || | || || ||||| |||||
Sbjct 130531 ACGTTGTCGATGGTGTCGGAGCTTTCAACCTCCAAAGTGATGGTCTTTCCGGTGAGAGTC 130472
Query 118722 TTTACAAAAATCTGCAT 118738
|| ||||| ||||||||
Sbjct 130471 TTAACAAAGATCTGCAT 130455
Score = 120 bits (132), Expect = 3e-22
Identities = 164/229 (72%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569
|||| || || | | ||| |||||||| | ||| ||||| ||||| || ||||| ||
Sbjct 130911 TACCACCACGGAGACGCAATACCAAGTGAAGTGTGGACTCCTTTTGGATATTGTAGTCAG 130852
Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629
|| || | || || ||||| || |||||| |||| | | |||||| || ||||
Sbjct 130851 CCAATGTTCTGCCGTCTTCAAGCTGCTTCCCAGCGAAGATCAATCTCTGCTGGTCCGGAG 130792
Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689
| || |||||||||||| ||| ||| ||||| | |||| ||| || | |||||| |
Sbjct 130791 GGATACCCTCCTTGTCTTGAATCTTTGCCTTAACATTGTCGATGGTATCAGAGCTCTCAA 130732
Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|||| | || | || || ||||||| || || ||||| ||||||||
Sbjct 130731 CCTCCAAAGTGATAGTCTTTCCGGTCAATGTCTTGACAAAGATCTGCAT 130683
>seq19979
Length=600886
Score = 161 bits (178), Expect = 9e-35
Identities = 173/229 (76%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569
|||| || || | | ||| |||||||| | || ||||| || || ||||||||||||
Sbjct 465565 TACCACCACGGAGACGCAAGACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCGG 465506
Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629
|| ||||| |||||||||||| || |||||| |||||||||||||||| || ||||
Sbjct 465505 CCAATGTGCGACCATCCTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGAG 465446
Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689
| || || || |||||| |||||| ||| || | |||| |||||| | |||||| |
Sbjct 465445 GAATACCTTCTTTGTCTTGAATTTTGGCTTTTACGTTGTCGATGGTGTCGGAGCTCTCCA 465386
Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|||| | || | || || ||||||| ||| || || || ||||||||
Sbjct 465385 CCTCAAGAGTGATGGTCTTCCCGGTCAAAGTCTTAACGAAGATCTGCAT 465337
Score = 152 bits (168), Expect = 4e-32
Identities = 171/229 (75%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569
||||||| |||| | ||| |||||||| | || ||||| |||||||||||||| |||
Sbjct 475203 TACCTCCACGTAGACGCAAGACCAAGTGAAGGGTCGACTCCTTTTGAATGTTGTAGTCGG 475144
Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629
| ||||| |||||| ||||| ||||||||| ||||||||||||| || || ||||
Sbjct 475143 CTAGTGTGCGACCATCCTCAAGCTGCTTTCCAGCGAAGATGAGACGCTGTTGGTCCGGAG 475084
Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689
| ||||| |||||||| || || || || | || | |||||| | ||||| |
Sbjct 475083 GGATGCCTTCCTTGTCCTGGATCTTAGCCTTGACATTGTCAATGGTGTCGGAACTCTCAA 475024
Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|||| | || | ||| || ||||| || || || ||||| ||||||||
Sbjct 475023 CCTCCAGTGTGATCGTCTTACCGGTGAGGGTCTTGACAAAGATCTGCAT 474975
Score = 145 bits (160), Expect = 7e-30
Identities = 158/210 (75%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588
||||||||| | || ||||| || |||||||||||||| || || || ||||||
Sbjct 475412 CACCAAGTGAAGAGTCGACTCCTTCTGAATGTTGTAATCAGCCAGTGTACGACCATCCTC 475353
Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648
||||| ||||||||| |||||||||||||||| || ||||| ||||| ||||||||
Sbjct 475352 AAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGAATGCCTTCCTTGTCCTG 475293
Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708
|| || || || | || | |||||| | |||||| || |||| ||| | || ||
Sbjct 475292 GATCTTGGCCTTCACGTTATCAATGGTGTCAGAGCTCTCAACTTCGAGGGTGATTGTCTT 475233
Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
||||| || || || ||||| ||||||||
Sbjct 475232 TCCGGTAAGGGTCTTGACAAAGATCTGCAT 475203
Score = 143 bits (158), Expect = 2e-29
Identities = 157/209 (75%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589
|||||||| | || ||||| || || |||||||| ||| | ||||| |||||||
Sbjct 466001 ACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCTAAGGTGCGACCATCCTCG 465942
Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649
||||| ||||||||| |||||||||||||||| || ||||| ||||| |||||||| |
Sbjct 465941 AGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCTGGAGGAATGCCTTCCTTGTCCTGA 465882
Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709
|| || || || | || | |||||| | |||||| ||||| | || | || ||
Sbjct 465881 ATCTTGGCCTTCACGTTGTCAATGGTGTCGGAGCTCTCCACCTCCAGTGTGATGGTCTTA 465822
Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
||||||| || || || |||||||||||
Sbjct 465821 CCGGTCAAGGTCTTCACGAAAATCTGCAT 465793
Score = 138 bits (152), Expect = 1e-27
Identities = 168/229 (73%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569
|||| || || | | ||||||||| || | ||||||||| || || |||||||| ||
Sbjct 465793 TACCACCACGAAGACGCAACACCAAATGAAGTGTAGACTCCTTCTGGATGTTGTAGTCAG 465734
Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629
|| ||||| |||||| ||||| ||||||||| |||||||||||||||| || || |
Sbjct 465733 CCAGTGTGCGACCATCCTCAAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGGG 465674
Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689
| ||||| |||||||| ||| || || || | || | |||||| | ||||| |
Sbjct 465673 GAATGCCTTCCTTGTCCTGAATCTTAGCCTTCACGTTATCAATGGTGTCAGAACTCTCAA 465614
Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
| || | || | ||| || || |||| || || || |||||||||||
Sbjct 465613 CTTCAAGAGTGATCGTCTTTCCCGTCAAGGTCTTAACGAAAATCTGCAT 465565
Score = 125 bits (138), Expect = 6e-24
Identities = 165/229 (72%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569
|||| || || | || || |||||||||| ||||| || || || || |||||||||
Sbjct 474519 TACCACCACGGAGCCTTAAGACCAAGTGGAGAGTAGATTCCTTCTGGATATTGTAATCGG 474460
Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629
|| ||| || ||| || | ||| ||||| ||| |||| || | ||||||||| ||||
Sbjct 474459 CCAAAGTACGTCCATCTTCCAACTGCTTTCCGGCGAAGATAAGCCTCTGCTGATCCGGAG 474400
Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689
||||||||||| || ||| || ||| || | |||| ||||| | ||| || |
Sbjct 474399 TAATGCCCTCCTTATCCTGAATCTTGGCTTTGACGTTGTCGATTGTGTCAGAGCTTTCCA 474340
Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|||| | ||| | || || ||||| || || || || || ||||||||
Sbjct 474339 CCTCAAGGGTGATAGTCTTTCCGGTGAGTGTCTTGACGAAGATCTGCAT 474291
Score = 120 bits (132), Expect = 3e-22
Identities = 164/229 (72%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569
|||| || || | || | |||||| |||| ||||| || || || ||||||||||||
Sbjct 464881 TACCACCACGGAGCCTTAGCACCAAATGGAGAGTAGATTCCTTCTGGATGTTGTAATCGG 464822
Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629
|| ||| || || || | ||| |||||||| |||| || | ||||||||| ||||
Sbjct 464821 CCAAAGTACGGCCGTCTTCCAACTGCTTTCCAGCAAAGATAAGCCTCTGCTGATCCGGAG 464762
Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689
| ||||||||||| || || || |||||| | |||| ||||| | || || |
Sbjct 464761 GAATGCCCTCCTTATCCTGGATCTTGGCTTTAACGTTGTCGATTGTGTCAGAACTTTCCA 464702
Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|||| | ||| | || || ||||| || || || || || ||||||||
Sbjct 464701 CCTCAAGGGTGATAGTCTTTCCGGTGAGTGTCTTGACGAAGATCTGCAT 464653
Score = 120 bits (132), Expect = 3e-22
Identities = 164/229 (72%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569
||||||| |||| | ||| |||||||| | || ||||| |||||||||||||| ||
Sbjct 465337 TACCTCCACGTAGACGCAAGACCAAGTGAAGGGTCGACTCCTTTTGAATGTTGTAGTCAG 465278
Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629
| ||| ||| ||| || || || ||||| || |||| | | |||||| || ||||
Sbjct 465277 CGAGAGTACGCCCATCTTCAAGTTGCTTTCCGGCAAAGATCAACCTCTGCTGGTCCGGAG 465218
Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689
| ||||||||||||||| || || ||| || | || | |||||| | ||||| |
Sbjct 465217 GAATGCCCTCCTTGTCTTGGATCTTGGCTTTGACATTGTCAATGGTGTCAGAACTCTCCA 465158
Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|||| | || | || || || |||| || || ||||| || |||||
Sbjct 465157 CCTCCAAAGTAATGGTCTTTCCCGTCAACGTCTTGACAAAGATTTGCAT 465109
Score = 107 bits (118), Expect = 2e-18
Identities = 161/229 (70%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569
|||| || |||| | |||||||||||| | ||| ||||| || || || ||||| ||
Sbjct 474975 TACCACCACGTAGACGCAACACCAAGTGAAGTGTCGACTCCTTCTGGATATTGTAGTCAG 474916
Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629
|| ||| | || || ||||| ||||| || |||| | | ||||||||| ||||
Sbjct 474915 CCAAAGTTCTACCGTCTTCAAGCTGCTTTCCGGCAAAGATCAACCTCTGCTGATCCGGAG 474856
Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689
| || || ||||||||| || || ||| || | || | ||||| | ||||| |
Sbjct 474855 GGATACCTTCCTTGTCTTGGATCTTGGCTTTGACATTGTCAATAGTGTCAGAACTCTCCA 474796
Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|||| | || | || || ||||| ||||| || || || ||||||||
Sbjct 474795 CCTCCAAAGTGATGGTCTTTCCGGTGAGAGTCTTAACGAAGATCTGCAT 474747
>seq18898
Length=1351152
Score = 138 bits (152), Expect = 1e-27
Identities = 168/229 (73%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569
|||| || || | | |||||| | ||||| || ||||| || ||||| ||||||||
Sbjct 748887 TACCACCACGGAGACGCAACACAAGGTGGAGCGTGGACTCCTTCTGAATATTGTAATCCG 748828
Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629
| ||| || || |||||||| || || || ||||||| | |||||| || || |
Sbjct 748827 CGAGAGTACGTCCGTCTTCGAGCTGCTTACCGGCAAAGATGAGTCTCTGCTGGTCTGGTG 748768
Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689
| || ||||| || ||| || ||| ||| || | |||| |||||| | ||||||||
Sbjct 748767 GGATTCCCTCTTTATCTTGGATCTTTGCTTTGACGTTGTCGATGGTGTCAGAGCTCTCGA 748708
Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
| |||| ||| | ||||||||||||| ||| || ||||| ||||||||
Sbjct 748707 CTTCGAGGGTGATGGTTTTGCCGGTCAAAGTCTTGACAAAGATCTGCAT 748659
Score = 129 bits (142), Expect = 5e-25
Identities = 154/209 (74%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589
||||| || | || ||||| || || ||||||||||| || ||| || ||||||
Sbjct 749323 ACCAAATGAAGAGTCGACTCCTTCTGGATGTTGTAATCAGCCAGAGTCCGACCATCCTCA 749264
Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649
|||||||| |||||| ||||||| | |||||| || || || || || ||||||||| |
Sbjct 749263 AGCTGTTTACCAGCGAAGATGAGTCTCTGCTGGTCTGGCGGGATCCCTTCCTTGTCTTGA 749204
Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709
|| || || || | || | ||||| | |||||| ||||||| || | |||||
Sbjct 749203 ATCTTCGCCTTCACGTTGTCAATTGTGTCAGAGCTCTCAACCTCGAGAGTAATGGTTTTT 749144
Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
||||| || || || || |||||||||||
Sbjct 749143 CCGGTGAGGGTCTTGACGAAAATCTGCAT 749115
Score = 120 bits (132), Expect = 3e-22
Identities = 152/209 (73%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589
||||| || | || ||||| || || ||||||||||| | ||||| ||||||
Sbjct 749095 ACCAAATGAAGGGTCGACTCCTTCTGGATGTTGTAATCCGCAAGCGTGCGACCGTCCTCG 749036
Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649
||||| ||||||||| ||||||| | ||||||||| || || || || |||||||| |
Sbjct 749035 AGCTGCTTTCCAGCGAAGATGAGTCTCTGCTGATCTGGTGGGATCCCTTCCTTGTCCTGA 748976
Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709
|| || || || | |||| ||||| | |||||| ||||| | || | || ||
Sbjct 748975 ATCTTAGCCTTGACGTTATCGATCGTGTCAGAGCTCTCAACCTCCAAAGTAATAGTCTTT 748916
Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| |||| ||| || ||||| ||||||||
Sbjct 748915 CCTGTCAAAGTCTTGACAAAGATCTGCAT 748887
Score = 111 bits (122), Expect = 1e-19
Identities = 147/204 (72%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594
||||| || ||||| ||||| |||||||| || | ||| | |||||||||||
Sbjct 748634 GTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCAGCAAGAGTCCTTCCGTCCTCGAGCTG 748575
Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654
|| || ||| |||| || | |||||| || ||||| || || |||||||| || ||
Sbjct 748574 CTTCCCGGCGAAGATAAGTCTCTGCTGGTCCGGAGGAATACCTTCCTTGTCCTGGATCTT 748515
Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714
|| || | |||| |||||| | |||||||||||||| || | || ||||| ||
Sbjct 748514 GGCCTTGACATTGTCGATGGTGTCAGAGCTCTCGACCTCGAGAGTGATGGTCTTGCCAGT 748455
Query 118715 CAGAGTTTTTACAAAAATCTGCAT 118738
|||||||| || || || |||||
Sbjct 748454 GAGAGTTTTCACGAATATTTGCAT 748431
>seq20655
Length=190867
Score = 129 bits (142), Expect = 5e-25
Identities = 166/229 (72%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569
|||| || || | | |||||||||||||| || ||||| || || || |||||||||
Sbjct 174443 TACCACCACGGAGACGCAACACCAAGTGGAGAGTCGACTCCTTCTGGATATTGTAATCGG 174502
Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629
| ||| || || || | ||| || || ||| |||| || | |||||||| ||||
Sbjct 174503 CTAAAGTACGGCCGTCTTCCAACTGCTTACCGGCGAAGATAAGCCTTTGCTGATCCGGAG 174562
Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689
| ||||| ||||| || ||| || |||||| | |||| ||||| | ||| || |
Sbjct 174563 GAATGCCTTCCTTATCCTGAATCTTGGCTTTAACGTTGTCGATCGTGTCAGAGCTTTCCA 174622
Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|||||| ||| | ||| || ||||| ||||| || || || ||||||||
Sbjct 174623 CCTCGAGGGTGATCGTCTTTCCGGTGAGAGTCTTAACGAAGATCTGCAT 174671
Score = 125 bits (138), Expect = 6e-24
Identities = 158/217 (73%), Gaps = 0/217 (0%)
Strand=Plus/Plus
Query 118526 CAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATC 118585
||| |||||||| | || ||||| || || |||||||| ||| || || || |||
Sbjct 173775 CAAGACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCCAAGGTACGACCATC 173834
Query 118586 CTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645
|| ||||| || |||||| |||||||||||||||| || ||||| || || ||||| ||
Sbjct 173835 TTCAAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGAATACCTTCCTTATC 173894
Query 118646 TGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGT 118705
| || || ||| || | || | |||||| | |||||| ||||| | || | ||
Sbjct 173895 TTGGATCTTAGCTTTCACGTTATCAATGGTGTCGGAGCTCTCCACCTCTAGAGTGATGGT 173954
Query 118706 TTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 118742
|| || |||| ||||| || || ||||||||| ||
Sbjct 173955 CTTCCCTGTCAATGTTTTAACGAAGATCTGCATGCCT 173991
Score = 116 bits (128), Expect = 3e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571
||||| || | | ||| |||||||| | ||| ||||| || || ||||| || || |
Sbjct 173989 CCTCCACGGAGACGCAAGACCAAGTGAAGTGTTGACTCCTTCTGGATGTTATAGTCAGCC 174048
Query 118572 ATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGT 118631
| ||| | ||| || ||||| |||||||| |||| | | ||||||||| |||||
Sbjct 174049 AAAGTTCTACCATCTTCAAGCTGCTTTCCAGCAAAGATCAACCTCTGCTGATCCGGAGGA 174108
Query 118632 ATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACC 118691
|| |||||||||||| ||| || ||| || | || | || || | |||||| |||
Sbjct 174109 ATACCCTCCTTGTCTTGAATCTTCGCTTTCACATTATCAATCGTATCAGAGCTCTCCACC 174168
Query 118692 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| | || | || || || |||| || || ||||||||||||||
Sbjct 174169 TCCAAAGTAATAGTCTTTCCCGTCAACGTCTTGACAAAAATCTGCAT 174215
Score = 86.0 bits (94), Expect = 5e-12
Identities = 137/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601
|| ||||| |||||||| || || || | ||| || ||||||||| || |||||
Sbjct 174247 GTCGACTCCTTTTGAATATTATAGTCAGCAAGAGTACGGCCATCCTCGAGTTGCTTTCCT 174306
Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661
|| |||| | | ||||| || || || || |||||||| ||| ||| || ||
Sbjct 174307 GCAAAGATCAACCTTTGCTGGTCCGGTGGGATTCCCTCCTTATCTTGAATCTTAGCCTTG 174366
Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721
|| | || | ||||| | ||||| ||||| | || | || || ||||||| |||
Sbjct 174367 ACATTGTCAATAGTGTCAGAACTCTCCACCTCCAAAGTAATAGTCTTTCCGGTCAAAGTC 174426
Query 118722 TTTACAAAAATCTGCAT 118738
|| || |||||||||||
Sbjct 174427 TTGACGAAAATCTGCAT 174443
>seq19059
Length=274371
Score = 129 bits (142), Expect = 5e-25
Identities = 166/229 (72%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569
|||| || || | | |||||||||||||| || ||||| || || || |||||||||
Sbjct 257947 TACCACCACGGAGACGCAACACCAAGTGGAGAGTCGACTCCTTCTGGATATTGTAATCGG 258006
Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629
| ||| || || || | ||| || || ||| |||| || | |||||||| ||||
Sbjct 258007 CTAAAGTACGGCCGTCTTCCAACTGCTTACCGGCGAAGATAAGCCTTTGCTGATCCGGAG 258066
Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689
| ||||| ||||| || ||| || |||||| | |||| ||||| | ||| || |
Sbjct 258067 GAATGCCTTCCTTATCCTGAATCTTGGCTTTAACGTTGTCGATCGTGTCAGAGCTTTCCA 258126
Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|||||| ||| | ||| || ||||| ||||| || || || ||||||||
Sbjct 258127 CCTCGAGGGTGATCGTCTTTCCGGTGAGAGTCTTAACGAAGATCTGCAT 258175
Score = 125 bits (138), Expect = 6e-24
Identities = 158/217 (73%), Gaps = 0/217 (0%)
Strand=Plus/Plus
Query 118526 CAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATC 118585
||| |||||||| | || ||||| || || |||||||| ||| || || || |||
Sbjct 257279 CAAGACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCCAAGGTACGACCATC 257338
Query 118586 CTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645
|| ||||| || |||||| |||||||||||||||| || ||||| || || ||||| ||
Sbjct 257339 TTCAAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGAATACCTTCCTTATC 257398
Query 118646 TGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGT 118705
| || || ||| || | || | |||||| | |||||| ||||| | || | ||
Sbjct 257399 TTGGATCTTAGCTTTCACGTTATCAATGGTGTCGGAGCTCTCCACCTCTAGAGTGATGGT 257458
Query 118706 TTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 118742
|| || |||| ||||| || || ||||||||| ||
Sbjct 257459 CTTCCCTGTCAATGTTTTAACGAAGATCTGCATGCCT 257495
Score = 116 bits (128), Expect = 3e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571
||||| || | | ||| |||||||| | ||| ||||| || || ||||| || || |
Sbjct 257493 CCTCCACGGAGACGCAAGACCAAGTGAAGTGTTGACTCCTTCTGGATGTTATAGTCAGCC 257552
Query 118572 ATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGT 118631
| ||| | ||| || ||||| |||||||| |||| | | ||||||||| |||||
Sbjct 257553 AAAGTTCTACCATCTTCAAGCTGCTTTCCAGCAAAGATCAACCTCTGCTGATCCGGAGGA 257612
Query 118632 ATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACC 118691
|| |||||||||||| ||| || ||| || | || | || || | |||||| |||
Sbjct 257613 ATACCCTCCTTGTCTTGAATCTTCGCTTTCACATTATCAATCGTATCAGAGCTCTCCACC 257672
Query 118692 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| | || | || || || |||| || || ||||||||||||||
Sbjct 257673 TCCAAAGTAATAGTCTTTCCCGTCAACGTCTTGACAAAAATCTGCAT 257719
Score = 86.0 bits (94), Expect = 5e-12
Identities = 137/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601
|| ||||| |||||||| || || || | ||| || ||||||||| || |||||
Sbjct 257751 GTCGACTCCTTTTGAATATTATAGTCAGCAAGAGTACGGCCATCCTCGAGTTGCTTTCCT 257810
Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661
|| |||| | | ||||| || || || || |||||||| ||| ||| || ||
Sbjct 257811 GCAAAGATCAACCTTTGCTGGTCCGGTGGGATTCCCTCCTTATCTTGAATCTTAGCCTTG 257870
Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721
|| | || | ||||| | ||||| ||||| | || | || || ||||||| |||
Sbjct 257871 ACATTGTCAATAGTGTCAGAACTCTCCACCTCCAAAGTAATAGTCTTTCCGGTCAAAGTC 257930
Query 118722 TTTACAAAAATCTGCAT 118738
|| || |||||||||||
Sbjct 257931 TTGACGAAAATCTGCAT 257947
>seq19630
Length=159711
Score = 122 bits (134), Expect = 8e-23
Identities = 141/190 (74%), Gaps = 0/190 (0%)
Strand=Plus/Plus
Query 118549 CTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGA 118608
|||| || |||||||| || || ||| || ||| |||||||||||||| ||| |||
Sbjct 121543 CTTTCTGGATGTTGTAGTCAGCCAAAGTACGGCCATCTTCGAGCTGTTTTCCGGCGAAGA 121602
Query 118609 TGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTT 118668
| || | ||||||||| ||||| || || || |||||| || || || || | |
Sbjct 121603 TCAGTCTCTGCTGATCCGGAGGGATTCCTTCTTTGTCTTGGATCTTGGCCTTGACATTGT 121662
Query 118669 CGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAA 118728
||| |||||| | | ||||||||||| ||| | || |||||||| || ||||| || |
Sbjct 121663 CGATGGTGTCAGAGGACTCGACCTCGAGGGTGATGGTCTTGCCGGTTAGGGTTTTCACGA 121722
Query 118729 AAATCTGCAT 118738
| ||||||||
Sbjct 121723 AGATCTGCAT 121732
>seq19135
Length=1448613
Score = 93.3 bits (102), Expect = 4e-14
Identities = 143/204 (70%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594
||| | ||| || || || || |||||||| ||| | |||||| || ||||||||
Sbjct 1071220 GTGAAGTGTTGATTCCTTCTGGATGTTGTAGTCGGCGAGAGTGCGTCCGTCTTCGAGCTG 1071161
Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654
||||| ||| | || | |||||||| || || || || || ||||||||| || ||
Sbjct 1071160 CTTTCCGGCGAATATCAATCGCTGCTGGTCCGGTGGGATTCCTTCCTTGTCTTGGATCTT 1071101
Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714
|| || | |||| ||||| | ||||||||||| ||| | || || || ||
Sbjct 1071100 CGCCTTCACATTGTCGATCGTGTCTGATGACTCGACCTCGAGGGTGATTGTCTTCCCCGT 1071041
Query 118715 CAGAGTTTTTACAAAAATCTGCAT 118738
|| ||||| || || ||||||||
Sbjct 1071040 TAGGGTTTTCACGAAGATCTGCAT 1071017
>seq19364
Length=374643
Score = 86.0 bits (94), Expect = 5e-12
Identities = 137/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601
|| |||||||| |||||| |||| || | | ||| | |||||||||||| || ||
Sbjct 235213 GTTGACTCTTTCTGAATGCTGTAGTCCCCTAAAGTCCTACCATCCTCGAGCTGCTTCCCT 235272
Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661
|| | || || | |||||| || || | || || || |||||| ||| || ||
Sbjct 235273 GCAAATATCAGCCTCTGCTGGTCCGGTTGAATCCCTTCTTTGTCTTGAATCTTGGACTTC 235332
Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721
|| | || | || || | |||||||||||| | || | || || || |||| |||
Sbjct 235333 ACGTTATCAATCGTATCAGAGCTCTCGACCTCAAGTGTGATGGTCTTTCCCGTCAAAGTC 235392
Query 118722 TTTACAAAAATCTGCAT 118738
|| ||||| ||||||||
Sbjct 235393 TTGACAAATATCTGCAT 235409
>seq19776
Length=1148151
Score = 82.4 bits (90), Expect = 7e-11
Identities = 144/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588
||||| || | || ||||| || || |||||||| ||| | || ||| || ||
Sbjct 756041 CACCAGATGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGTGTACGCCCGTCTTC 755982
Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648
|||||||| || ||| | || | | |||||| || || || || ||||||||||||
Sbjct 755981 CAGCTGTTTCCCGGCGAAAATCAATCTCTGCTGGTCCGGTGGGATTCCCTCCTTGTCTTG 755922
Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708
|| || ||| || | |||| ||||||| || ||||||| || | || ||
Sbjct 755921 GATCTTCGCTTTCACATTGTCGATCGTGTCCGACGATTCCACCTCGAGTGTGATGGTCTT 755862
Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| || || ||||| || || ||||||||
Sbjct 755861 CCCCGTTAGGGTTTTCACGAAGATCTGCAT 755832
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433717478963044
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |