Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sisymbrium_20irio_20[genbank_20GCA_5F000411075.1_202013-06-14] 21,357 sequences; 245,550,082 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq21007 87.8 2e-12 >seq21007 Length=954693 Score = 87.8 bits (96), Expect = 2e-12 Identities = 142/202 (70%), Gaps = 2/202 (1%) Strand=Plus/Minus Query 20999 GACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACGGGACCCCGAG 21058 ||||||||| | | | || || |||| ||| ||| ||||||||||| || || || Sbjct 134486 GACGTGAGCTAGGATGCATGTAAGAAGGGAGTATGAGGCAATGTTAAACGGTACACCAAG 134427 Query 21059 GCCCATGTCGGCGGACCTCTGGTACAGCTGGCAGGACAGCTCCCCCCGAGCCACGTAAAA 21118 ||||| || || || | ||| |||| || || || ||||| || || || ||||| Sbjct 134426 ACCCATATCAGCTGAGCGCTGATACATTTGACATGAAAGCTCTCCATTTGCAACATAAAA 134367 Query 21119 CTGACACAAA-ACGTGACAAGGAGGGAGAGCCATCCGCGCGAGGTCCGCGGGGTTCCACG 21177 ||| | |||| | ||| || ||||| || |||||| || ||||| | || ||||| | Sbjct 134366 CTG-CGCAAACATGTGGCATGGAGGAAGTGCCATCAGCTTAAGGTCAGAAGGATTCCAAG 134308 Query 21178 CGCACATAACGATGCGCCGATC 21199 | |||| | || || ||||| Sbjct 134307 CCGACATTATTATCCGTCGATC 134286 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427664654853360