Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sisymbrium_20irio_20[genbank_20GCA_5F000411075.1_202013-06-14] 21,357 sequences; 245,550,082 total letters Query= NC_004690.1 Length=113220 Score E Sequences producing significant alignments: (Bits) Value seq19979 87.8 1e-12 >seq19979 Length=600886 Score = 87.8 bits (96), Expect = 1e-12 Identities = 147/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 15152 AAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCT 15211 || || || |||||||| || || || || |||||||||||| | | | | || Sbjct 465548 AAGACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCGGCCAATGTGCGACCATCC 465489 Query 15212 TCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCA 15271 || | || ||||||||| | || | ||| || ||||| ||||| ||||||||||| Sbjct 465488 TCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGAATACCTTCTTTGTCT 465429 Query 15272 CAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTT 15331 ||||||| ||||| | || ||||| ||| | || || || | || ||||| Sbjct 465428 TGAATTTTGGCTTTTACGTTGTCGATGGTGTCGGAGCTCTCCACCTCAAGAGTGATGGTC 465369 Query 15332 TTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 || || |||| ||| || || || || |||||| Sbjct 465368 TTCCCGGTCAAAGTCTTAACGAAGATCTGCATA 465336 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 362084928941937