Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sisymbrium_20irio_20[genbank_20GCA_5F000411075.1_202013-06-14] 21,357 sequences; 245,550,082 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq20655 82.4 6e-11 seq19059 82.4 6e-11 >seq20655 Length=190867 Score = 82.4 bits (90), Expect = 6e-11 Identities = 148/214 (69%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||| || || || || || ||||| ||||| || || ||| |||| ||| | Sbjct 174671 ATGCAGATCTTCGTTAAGACTCTCACCGGAAAGACGATCACCCTCGAGGTGGAAAGCTCT 174612 Query 115346 GACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 ||||| | | ||||| || ||| || ||| ||||| |||||| | || ||||| Sbjct 174611 GACAC-GATCGACAACGTTAAAGCCAAGATTCAGGATAAGGAAGGCATTCCTCCGGATCA 174553 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 |||||| ||||| | || || || || || ||||| | | || | |||||||| || Sbjct 174552 GCAAAGGCTTATCTTCGCCGGTAAGCAGTTGGAAGACGGCCGTACTTTAGCCGATTACAA 174493 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTG 115498 || || || ||||| ||| | || |||||||| Sbjct 174492 TATCCAGAAGGAGTCGACTCTCCACTTGGTGTTG 174459 >seq19059 Length=274371 Score = 82.4 bits (90), Expect = 6e-11 Identities = 148/214 (69%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||| || || || || || ||||| ||||| || || ||| |||| ||| | Sbjct 258175 ATGCAGATCTTCGTTAAGACTCTCACCGGAAAGACGATCACCCTCGAGGTGGAAAGCTCT 258116 Query 115346 GACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 ||||| | | ||||| || ||| || ||| ||||| |||||| | || ||||| Sbjct 258115 GACAC-GATCGACAACGTTAAAGCCAAGATTCAGGATAAGGAAGGCATTCCTCCGGATCA 258057 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 |||||| ||||| | || || || || || ||||| | | || | |||||||| || Sbjct 258056 GCAAAGGCTTATCTTCGCCGGTAAGCAGTTGGAAGACGGCCGTACTTTAGCCGATTACAA 257997 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTG 115498 || || || ||||| ||| | || |||||||| Sbjct 257996 TATCCAGAAGGAGTCGACTCTCCACTTGGTGTTG 257963 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425233287874840