Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sisymbrium_20irio_20[genbank_20GCA_5F000411075.1_202013-06-14] 21,357 sequences; 245,550,082 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq19979 89.7 4e-13 >seq19979 Length=600886 Score = 89.7 bits (98), Expect = 4e-13 Identities = 150/215 (70%), Gaps = 4/215 (2%) Strand=Plus/Minus Query 14965 AAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCG--CGT 15022 || || || |||||||| || || || || |||||||||||| | ||| || | | Sbjct 465548 AAGACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCG--GCCAATGTGCGACCAT 465491 Query 15023 CTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGT 15082 | || | || ||||||||| | || | |||||| ||||| ||||| ||||| |||| Sbjct 465490 CCTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGAATACCTTCTTTGT 465431 Query 15083 CACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGG 15142 | ||||||| |||||| | || || || ||| | || || || | || |||| Sbjct 465430 CTTGAATTTTGGCTTTTACGTTGTCGATGGTGTCGGAGCTCTCCACCTCAAGAGTGATGG 465371 Query 15143 TTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 | || || |||| ||| || || || || |||||| Sbjct 465370 TCTTCCCGGTCAAAGTCTTAACGAAGATCTGCATA 465336 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357298974994745