Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sisymbrium_20irio_20[genbank_20GCA_5F000411075.1_202013-06-14] 21,357 sequences; 245,550,082 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq18898 98.7 9e-16 seq20422 86.0 6e-12 >seq18898 Length=1351152 Score = 98.7 bits (108), Expect = 9e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 ||||| | ||||| || || || ||||| ||| | ||||| |||||||||| | Sbjct 748659 ATGCAGATCTTTGTCAAGACTTTGACCGGCAAAACCATCACCCTCGAAGTCGAGAGCTCT 748718 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 || || ||||| | || ||| ||| || ||||||||||| || || || || ||| Sbjct 748719 GACACCATCGACAACGTCAAAGCAAAGATCCAAGATAAAGAGGGAATCCCACCAGACCAG 748778 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354 || |||||||| | | ||| || || |||||||| | | | | || ||||||||| Sbjct 748779 CAGAGACTCATCTTTGCCGGTAAGCAGCTCGAAGACGGACGTACTCTCGCGGATTACAAT 748838 Query 25355 ATTCAAAAAGAATCCAC 25371 ||||| || || ||||| Sbjct 748839 ATTCAGAAGGAGTCCAC 748855 >seq20422 Length=233597 Score = 86.0 bits (94), Expect = 6e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 ||||| | ||||| || || | |||||||| | ||||| | || || ||| | | Sbjct 130455 ATGCAGATCTTTGTTAAGACTCTCACCGGAAAGACCATCACTTTGGAGGTTGAAAGCTCC 130514 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 || || ||||| | || || ||| || |||||||||||||| || || |||||| Sbjct 130515 GACACCATCGACAACGTCAAGGCAAAGATCCAGGATAAAGAGGGTATCCCTCCGGATCAG 130574 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354 || || ||||| | || ||||| || |||||||| | | | | | ||| ||||| Sbjct 130575 CAGAGGCTCATCTTCGCTGGCAAGCAGCTCGAAGACGGTCGCACCTTAGCCGACTACAAC 130634 Query 25355 ATTCAAAAAGAATCCAC 25371 |||||||| || || || Sbjct 130635 ATTCAAAAGGAGTCGAC 130651 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 444975576486240