Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sisymbrium_20irio_20[genbank_20GCA_5F000411075.1_202013-06-14] 21,357 sequences; 245,550,082 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq19979 136 2e-27 seq18898 136 2e-27 seq20655 118 7e-22 seq19059 118 7e-22 seq20422 113 3e-20 seq19776 113 3e-20 seq19364 89.7 3e-13 seq21172 84.2 1e-11 >seq19979 Length=600886 Score = 136 bits (150), Expect = 2e-27 Identities = 163/219 (74%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 |||||||| ||||| || || || ||||||||||||||| || || | || || ||| Sbjct 465326 AGACGCAAGACCAAGTGAAGGGTCGACTCCTTTTGAATGTTGTAGTCAGCGAGAGTACGC 465267 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | ||||||||||| || |||||||| || || | ||| |||||||| || | |||||| Sbjct 465266 CCATCTTCAAGTTGCTTTCCGGCAAAGATCAACCTCTGCTGGTCCGGAGGAATGCCCTCC 465207 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 |||||| |||| || | ||| || | ||| ||||| |||||||| |||| || Sbjct 465206 TTGTCTTGGATC-TTGGCTTTGACATTGTCAATGGTGTCAGAACTCTCCACCTCCAAAGT 465148 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || || || || || ||||| || ||||| || ||||| Sbjct 465147 AATGGTCTTTCCCGTCAACGTCTTGACAAAGATTTGCAT 465109 Score = 118 bits (130), Expect = 7e-22 Identities = 159/219 (73%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 |||||||| ||||| || || || ||||||||||||||| || || | ||||| || Sbjct 475192 AGACGCAAGACCAAGTGAAGGGTCGACTCCTTTTGAATGTTGTAGTCGGCTAGTGTGCGA 475133 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | || ||||| || || || || || || | ||||||||||||||| || | || ||| Sbjct 475132 CCATCCTCAAGCTGCTTTCCAGCGAAGATGAGACGCTGTTGGTCCGGAGGGATGCCTTCC 475073 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 ||||| |||| || | || || | ||| ||||| ||||| || |||| || Sbjct 475072 TTGTCCTGGATC-TTAGCCTTGACATTGTCAATGGTGTCGGAACTCTCAACCTCCAGTGT 475014 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||||| |||||||| | || || ||||| |||||||| Sbjct 475013 GATCGTCTTACCGGTGAGGGTCTTGACAAAGATCTGCAT 474975 Score = 116 bits (128), Expect = 2e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || | |||||||||||||||||| || || |||||| || ||||| || || | Sbjct 465791 CCACCACGAAGACGCAACACCAAATGAAGTGTAGACTCCTTCTGGATGTTGTAGTCAGCC 465732 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 ||||| || | || ||||| || || || || || || | |||||| |||||||| || Sbjct 465731 AGTGTGCGACCATCCTCAAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGGGGA 465672 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCAC 34658 | || |||||||| ||| || | || ||| || ||| ||||| ||||| || Sbjct 465671 ATGCCTTCCTTGTC-CTGAATCTTAGCCTTCACGTTATCAATGGTGTCAGAACTCTCAAC 465613 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||| | || ||||| || || || || || || || ||||||||||| Sbjct 465612 TTCAAGAGTGATCGTCTTTCCCGTCAAGGTCTTAACGAAAATCTGCAT 465565 Score = 104 bits (114), Expect = 1e-17 Identities = 156/219 (71%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 |||||||||||||| || || || |||||| || || || || || | | |||| Sbjct 474964 AGACGCAACACCAAGTGAAGTGTCGACTCCTTCTGGATATTGTAGTCAGCCAAAGTTCTA 474905 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 |||||||||| || || |||||||| || || | ||| || ||||| || | || ||| Sbjct 474904 CCGTCTTCAAGCTGCTTTCCGGCAAAGATCAACCTCTGCTGATCCGGAGGGATACCTTCC 474845 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 |||||| |||| || | ||| || | ||| ||||| |||||||| |||| || Sbjct 474844 TTGTCTTGGATC-TTGGCTTTGACATTGTCAATAGTGTCAGAACTCTCCACCTCCAAAGT 474786 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || || || ||||| | || || || || |||||||| Sbjct 474785 GATGGTCTTTCCGGTGAGAGTCTTAACGAAGATCTGCAT 474747 Score = 91.5 bits (100), Expect = 9e-14 Identities = 153/219 (70%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||| | ||||| || || || |||||| || ||||| || || | | || || Sbjct 466010 AGACGGAGGACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCTAAGGTGCGA 465951 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | || || || || || || || || || | |||||| ||||| || || | || ||| Sbjct 465950 CCATCCTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCTGGAGGAATGCCTTCC 465891 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGATAA-AATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 ||||| ||||| | || ||| | ||| ||||| ||||||||| |||| || Sbjct 465890 TTGTCCTGAATCTTG-GCCTTCACGTTGTCAATGGTGTCGGAGCTCTCCACCTCCAGTGT 465832 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || || |||||||| || || ||||| ||||||||||| Sbjct 465831 GATGGTCTTACCGGTCAAGGTCTTCACGAAAATCTGCAT 465793 Score = 89.7 bits (98), Expect = 3e-13 Identities = 148/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 34497 CACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTC 34556 ||||||||||||||| ||||| || ||||| ||||| | | || || ||||||| Sbjct 464862 CACCAAATGGAGAGTAGATTCCTTCTGGATGTTGTAATCGGCCAAAGTACGGCCGTCTTC 464803 Query 34557 AAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGT 34616 | || || || ||||| || | | ||| || ||||| || | |||||||| || Sbjct 464802 CAACTGCTTTCCAGCAAAGATAAGCCTCTGCTGATCCGGAGGAATGCCCTCCTTATCCTG 464743 Query 34617 GATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTT 34675 |||| || | ||||||| | |||||||| || ||||| || | ||| || || | Sbjct 464742 GATC-TTGGCTTTAACGTTGTCGATTGTGTCAGAACTTTCCACCTCAAGGGTGATAGTCT 464684 Query 34676 TACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 | ||||| | || || || || |||||||| Sbjct 464683 TTCCGGTGAGTGTCTTGACGAAGATCTGCAT 464653 >seq18898 Length=1351152 Score = 136 bits (150), Expect = 2e-27 Identities = 163/219 (74%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||||||||| | ||||| ||| |||||| ||||| || ||||| | || || || Sbjct 748876 AGACGCAACACAAGGTGGAGCGTGGACTCCTTCTGAATATTGTAATCCGCGAGAGTACGT 748817 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 ||||||| || || ||||||||||| || | | ||| ||||| || || | |||||| Sbjct 748816 CCGTCTTCGAGCTGCTTACCGGCAAAGATGAGTCTCTGCTGGTCTGGTGGGATTCCCTCT 748757 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 || ||| |||| |||| ||| ||| | || ||||| |||||| ||||| | ||| Sbjct 748756 TTATCTTGGATC-TTTGCTTTGACGTTGTCGATGGTGTCAGAGCTCTCGACTTCGAGGGT 748698 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || ||||| ||||| || || || ||||| |||||||| Sbjct 748697 GATGGTTTTGCCGGTCAAAGTCTTGACAAAGATCTGCAT 748659 Score = 116 bits (128), Expect = 2e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 ||||| | |||||| | |||||||| ||||| |||||| || ||||| ||||| | Sbjct 749341 CCGCCACGAAGACGAAGAACCAAATGAAGAGTCGACTCCTTCTGGATGTTGTAATCAGCC 749282 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || || || | || ||||| |||||||| || || || | | ||| ||||| ||||| Sbjct 749281 AGAGTCCGACCATCCTCAAGCTGTTTACCAGCGAAGATGAGTCTCTGCTGGTCTGGCGGG 749222 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAA-AATTGTGTCTTCGCTCTCCAC 34658 | || ||||||||| ||||| | || ||| | ||||||||| |||||| || Sbjct 749221 ATCCCTTCCTTGTCTTGAATCTTC-GCCTTCACGTTGTCAATTGTGTCAGAGCTCTCAAC 749163 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || | || || ||||| ||||| | || || || ||||||||||| Sbjct 749162 CTCGAGAGTAATGGTTTTTCCGGTGAGGGTCTTGACGAAAATCTGCAT 749115 >seq20655 Length=190867 Score = 118 bits (130), Expect = 7e-22 Identities = 159/219 (73%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 |||||||| ||||| || || || |||||| || |||||||| || | | |||| Sbjct 173998 AGACGCAAGACCAAGTGAAGTGTTGACTCCTTCTGGATGTTATAGTCAGCCAAAGTTCTA 174057 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | |||||||| || || || ||||| || || | ||| || ||||| || | |||||| Sbjct 174058 CCATCTTCAAGCTGCTTTCCAGCAAAGATCAACCTCTGCTGATCCGGAGGAATACCCTCC 174117 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 |||||| ||| || | ||| || || ||| || || ||||||||| |||| || Sbjct 174118 TTGTCT-TGAATCTTCGCTTTCACATTATCAATCGTATCAGAGCTCTCCACCTCCAAAGT 174176 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || || || || || ||||| || |||||||||||||| Sbjct 174177 AATAGTCTTTCCCGTCAACGTCTTGACAAAAATCTGCAT 174215 Score = 98.7 bits (108), Expect = 6e-16 Identities = 139/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 34515 CTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAA 34574 |||||||||||| ||||| || | ||| || || | || || ||||| || || ||||| Sbjct 174252 CTCCTTTTGAATATTATAGTCAGCAAGAGTACGGCCATCCTCGAGTTGCTTTCCTGCAAA 174311 Query 34575 TATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGA 34634 || || | || |||||||| || | ||||||||| ||| ||| || | || || Sbjct 174312 GATCAACCTTTGCTGGTCCGGTGGGATTCCCTCCTTATCT-TGAATCTTAGCCTTGACAT 174370 Query 34635 T-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCA 34693 | ||| ||||| |||||||| |||| || || || || ||||| || || || | Sbjct 174371 TGTCAATAGTGTCAGAACTCTCCACCTCCAAAGTAATAGTCTTTCCGGTCAAAGTCTTGA 174430 Query 34694 CAAAAATCTGCAT 34706 | ||||||||||| Sbjct 174431 CGAAAATCTGCAT 174443 Score = 95.1 bits (104), Expect = 8e-15 Identities = 154/219 (70%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 |||||||||||||| |||||||| |||||| || || || ||||| | | || || Sbjct 174454 AGACGCAACACCAAGTGGAGAGTCGACTCCTTCTGGATATTGTAATCGGCTAAAGTACGG 174513 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 ||||||| | || |||||||| || || | | || || ||||| || | || ||| Sbjct 174514 CCGTCTTCCAACTGCTTACCGGCGAAGATAAGCCTTTGCTGATCCGGAGGAATGCCTTCC 174573 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 || || ||| || | ||||||| | || ||||| ||| ||||| || | ||| Sbjct 174574 TTATC-CTGAATCTTGGCTTTAACGTTGTCGATCGTGTCAGAGCTTTCCACCTCGAGGGT 174632 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||||| || ||||| | || || || || |||||||| Sbjct 174633 GATCGTCTTTCCGGTGAGAGTCTTAACGAAGATCTGCAT 174671 >seq19059 Length=274371 Score = 118 bits (130), Expect = 7e-22 Identities = 159/219 (73%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 |||||||| ||||| || || || |||||| || |||||||| || | | |||| Sbjct 257502 AGACGCAAGACCAAGTGAAGTGTTGACTCCTTCTGGATGTTATAGTCAGCCAAAGTTCTA 257561 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | |||||||| || || || ||||| || || | ||| || ||||| || | |||||| Sbjct 257562 CCATCTTCAAGCTGCTTTCCAGCAAAGATCAACCTCTGCTGATCCGGAGGAATACCCTCC 257621 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 |||||| ||| || | ||| || || ||| || || ||||||||| |||| || Sbjct 257622 TTGTCT-TGAATCTTCGCTTTCACATTATCAATCGTATCAGAGCTCTCCACCTCCAAAGT 257680 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || || || || || ||||| || |||||||||||||| Sbjct 257681 AATAGTCTTTCCCGTCAACGTCTTGACAAAAATCTGCAT 257719 Score = 98.7 bits (108), Expect = 6e-16 Identities = 139/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 34515 CTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAA 34574 |||||||||||| ||||| || | ||| || || | || || ||||| || || ||||| Sbjct 257756 CTCCTTTTGAATATTATAGTCAGCAAGAGTACGGCCATCCTCGAGTTGCTTTCCTGCAAA 257815 Query 34575 TATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGA 34634 || || | || |||||||| || | ||||||||| ||| ||| || | || || Sbjct 257816 GATCAACCTTTGCTGGTCCGGTGGGATTCCCTCCTTATCT-TGAATCTTAGCCTTGACAT 257874 Query 34635 T-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCA 34693 | ||| ||||| |||||||| |||| || || || || ||||| || || || | Sbjct 257875 TGTCAATAGTGTCAGAACTCTCCACCTCCAAAGTAATAGTCTTTCCGGTCAAAGTCTTGA 257934 Query 34694 CAAAAATCTGCAT 34706 | ||||||||||| Sbjct 257935 CGAAAATCTGCAT 257947 Score = 95.1 bits (104), Expect = 8e-15 Identities = 154/219 (70%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 |||||||||||||| |||||||| |||||| || || || ||||| | | || || Sbjct 257958 AGACGCAACACCAAGTGGAGAGTCGACTCCTTCTGGATATTGTAATCGGCTAAAGTACGG 258017 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 ||||||| | || |||||||| || || | | || || ||||| || | || ||| Sbjct 258018 CCGTCTTCCAACTGCTTACCGGCGAAGATAAGCCTTTGCTGATCCGGAGGAATGCCTTCC 258077 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 || || ||| || | ||||||| | || ||||| ||| ||||| || | ||| Sbjct 258078 TTATC-CTGAATCTTGGCTTTAACGTTGTCGATCGTGTCAGAGCTTTCCACCTCGAGGGT 258136 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||||| || ||||| | || || || || |||||||| Sbjct 258137 GATCGTCTTTCCGGTGAGAGTCTTAACGAAGATCTGCAT 258175 >seq20422 Length=233597 Score = 113 bits (124), Expect = 3e-20 Identities = 158/219 (72%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 |||||||| ||||| || || ||| ||||||||| || || || || | | ||||| Sbjct 130900 AGACGCAATACCAAGTGAAGTGTGGACTCCTTTTGGATATTGTAGTCAGCCAATGTTCTG 130841 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 |||||||||| || || || || || || || | ||| |||||||| || | |||||| Sbjct 130840 CCGTCTTCAAGCTGCTTCCCAGCGAAGATCAATCTCTGCTGGTCCGGAGGGATACCCTCC 130781 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 |||||| ||| |||| ||||| | || || || |||||| || |||| || Sbjct 130780 TTGTCT-TGAATCTTTGCCTTAACATTGTCGATGGTATCAGAGCTCTCAACCTCCAAAGT 130722 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || || || ||||| || || || ||||| |||||||| Sbjct 130721 GATAGTCTTTCCGGTCAATGTCTTGACAAAGATCTGCAT 130683 Score = 104 bits (114), Expect = 1e-17 Identities = 161/223 (72%), Gaps = 8/223 (4%) Strand=Plus/Minus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTG--AAAGTGTTC 34546 |||||||||||||| || || || |||||| |||||||| || || | |||||| | Sbjct 131356 AGACGCAACACCAAGTGAAGTGTAGACTCCTTCTGAATGTTGTAGTCGGCTAAAGTG--C 131299 Query 34547 GCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCT 34606 | | || || || || || || || || || | |||||| ||||| || || | || | Sbjct 131298 GACCATCCTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCTGGAGGAATACCTT 131239 Query 34607 CCTTGT-CTGTGATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCACTTCCAC 34664 |||| | |||| ||| || | || ||| || || ||||| |||||| || || | Sbjct 131238 CCTTATCCTGT-ATC-TTGGCCTTGACGTTATCGATGGTGTCAGAGCTCTCTACCTCGAG 131181 Query 34665 GGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 |||||| || ||||| || || || || ||||| ||||||||| Sbjct 131180 GGTTATTGTCTTACCAGTCAAGGTCTTGACAAAGATCTGCATG 131138 Score = 102 bits (112), Expect = 5e-17 Identities = 158/221 (71%), Gaps = 6/221 (3%) Strand=Plus/Minus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTG--AAAGTGTTC 34546 |||||||||||||| || || || |||||| ||||| || ||||| | |||||| | Sbjct 131128 AGACGCAACACCAAGTGAAGCGTAGACTCCTTCTGAATATTGTAATCGGCCAAAGTG--C 131071 Query 34547 GCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCT 34606 | | || ||||| || || || || || || | |||||| || ||||| || | |||| Sbjct 131070 GACCATCCTCAAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGATCCGGAGGAATACCCT 131011 Query 34607 CCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACG 34665 | ||||| |||| || | ||||||| | ||| ||||| ||| || || |||| Sbjct 131010 CTTTGTCCTGGATC-TTGGCTTTAACGTTGTCAATAGTGTCGGAGCTTTCAACCTCCAAA 130952 Query 34666 GTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || || || || || || | || || ||||| |||||||| Sbjct 130951 GTGATAGTCTTTCCCGTCAGGGTCTTGACAAAGATCTGCAT 130911 >seq19776 Length=1148151 Score = 113 bits (124), Expect = 3e-20 Identities = 164/225 (73%), Gaps = 5/225 (2%) Strand=Plus/Minus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||| | ||||| ||| || || |||||| || ||||| || || | ||||| ||| Sbjct 756049 AGACGGAGCACCAGATGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGTGTACGC 755990 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 ||||||| || ||||| ||||| || || || | ||| |||||||| || | ||||||| Sbjct 755989 CCGTCTTCCAGCTGTTTCCCGGCGAAAATCAATCTCTGCTGGTCCGGTGGGATTCCCTCC 755930 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGT-CTTCGCTCTCCACTTCCACGG 34666 |||||| |||| || | ||| || | || |||| | || | ||||| || | | Sbjct 755929 TTGTCTTGGATC-TTCGCTTTCACATTGTCGATCGTGTCCGACGAT-TCCACCTCGAGTG 755872 Query 34667 TTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT-GTTG 34710 | || || || || |||| |||||||| || |||||||| |||| Sbjct 755871 TGATGGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCATCGTTG 755827 >seq19364 Length=374643 Score = 89.7 bits (98), Expect = 3e-13 Identities = 131/183 (72%), Gaps = 2/183 (1%) Strand=Plus/Plus Query 34516 TCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAAT 34575 ||||| |||||| | ||||| | ||| || || | || ||||||||||| || ||||| Sbjct 235447 TCCTTCTGAATGCTGTAATCAGCAAGGGTGCGACCATCCTCAAGTTGTTTCCCTGCAAAG 235506 Query 34576 ATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT 34635 || | | ||| ||||||| || | || ||||||||| |||| || | ||| || | Sbjct 235507 ATGAGTCTCTGCTGGTCCGAGGGGATCCCTTCCTTGTCTTGGATC-TTAGCTTTGACATT 235565 Query 34636 A-AAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCAC 34694 | || |||||| |||||| || || | || ||||||||||| | | || || || Sbjct 235566 ATCGATAGTGTCTGAGCTCTCAACCTCTAGAGTAATCGTTTTACCAGCAAGGGTCTTGAC 235625 Query 34695 AAA 34697 ||| Sbjct 235626 AAA 235628 >seq21172 Length=998197 Score = 84.2 bits (92), Expect = 1e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || ||||| || | ||| || | ||| ||||| ||| || || ||||| ||||| | Sbjct 271996 CCACCTCTGAGCCTCAAGACGAGATGAAGAGTAGACTCTTTCTGGATGTTGTAATCCGCT 271937 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 |||||||| | ||||| ||||| |||||||||||||| | | |||||| || || || Sbjct 271936 AGTGTTCGTCCATCTTCCAGTTGCTTACCGGCAAATATCAGCCTCTGTTGATCTGGTGGT 271877 Query 34600 ACTCCCTCCTTGTC 34613 | || || ||||| Sbjct 271876 ATACCTTCTTTGTC 271863 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314647679524181