Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sisymbrium_20irio_20[genbank_20GCA_5F000411075.1_202013-06-14] 21,357 sequences; 245,550,082 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq18862 102 7e-17 >seq18862 Length=32547 Score = 102 bits (112), Expect = 7e-17 Identities = 116/154 (75%), Gaps = 5/154 (3%) Strand=Plus/Minus Query 29723 ACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGCACCCCGAGC 29782 |||||||| | |||| ||| || ||||||||| || |||||||| ||||| || || Sbjct 12011 ACGTGAGCTAGCATGCTCGTAAGAAGAGAGTAGGAAGCAATGTTAAACGGCACACCAAGT 11952 Query 29783 CCCATGTCCCCTGACCTCTGGTAGAGCTGGCACGAGAGCTCTCCGTCGCTCACGTAAAAC 29842 ||||||||| |||| | ||| || || || ||||||||||| || ||| |||||| Sbjct 11951 CCCATGTCCACTGAACGCTGATACGTTTGACATGAGAGCTCTCCTTCTGCCACATAAAAC 11892 Query 29843 --TGACACATGGCATGGCACGGAGGAAGGGCCAT 29874 || |||| |||||| |||||||| ||||| Sbjct 11891 TGTGCAACAT---ATGGCATGGAGGAAGTGCCAT 11861 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406057480415302