Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20americanum_20[genbank_20GCA_5F900188915.1_202017-07-22] 837 sequences; 9,013,692 total letters Query= NC_015283.1 Length=176428 Score E Sequences producing significant alignments: (Bits) Value seq83 567 8e-157 >seq83 Length=41462 Score = 567 bits (628), Expect = 8e-157 Identities = 720/985 (73%), Gaps = 4/985 (0%) Strand=Plus/Plus Query 168491 TTCTGCGAATGGGTAACAAGCACTAACAACAGACTTTATGTTGGTTGGTTCGGTGTCTTA 168550 ||||| | ||| |||| |||||| | ||| | ||||| |||| ||||| ||||| || Sbjct 3500 TTCTGTAACTGGATAACTAGCACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTG 3559 Query 168551 ATGATCCCATGTTTATTAACAGCAGCAGCATGT-TTCATTGTTGCATTTATTGCTGCACC 168609 |||||||| ||||| || ||| | | ||| || ||| |||| || |||||||| || Sbjct 3560 ATGATCCCTACCTTATTGACGGCAACTTC-TGTATTTATTATTGCCTTCATTGCTGCTCC 3618 Query 168610 ACCTGTCGATATCGACGGAATCAGAGAACCTGTAGCAGGTGCTCTAATGTATGGAAACAA 168669 || || || || || || || | |||||||| |||| ||||| | || |||||||| Sbjct 3619 TCCAGTAGACATTGATGGTATTCGTGAACCTGTTTCAGGGTCTCTACTTTACGGAAACAA 3678 Query 168670 CATCATCTCAGGTGCAGTTGTTCCATCTTCAAACGCAATCGGTCTACACTTCTACCCAAT 168729 || || || ||||| || |||| |||| || || ||| |||| || |||||||| Sbjct 3679 TATTATTTCCGGTGCCATTATTCCTACTTCTGCAGCTATAGGTTTACATTTTTACCCAAT 3738 Query 168730 TTGGGAAGCAGCTACAATCGATGAGTGGTTATATAATGGTGGTCCTTACCAGTTGGTAAT 168789 |||||||| || | | ||||| |||||||| || ||||||||||| | | | | Sbjct 3739 CTGGGAAGCGGCATCCGTTGATGAATGGTTATACAACGGTGGTCCTTATGAACTAATTGT 3798 Query 168790 CTTCCACTTCCTAATCGGAATCTCTGCCTACATGGGTAGACAGTGGGAA-TTATCATACA 168848 | |||||| || | || | || ||||||||| | ||||||| ||| | | | Sbjct 3799 TCTACACTTCTTACTTGGCGTAGCTTGTTACATGGGTCGTGAGTGGGAGCTTAGCTTCC- 3857 Query 168849 GACTAGGTATGAGACCTTGGATCTGTGTTGCTTATTCAGCACCAGTATCTGCAGCATTTG 168908 | || |||||| |||||||||| |||||| |||||||| || || | || || | Sbjct 3858 GTCTGGGTATGCGACCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACCG 3917 Query 168909 CAGTATTCCTTGTATACCCATTTGGTCAGGGTTCTTTCTCTGATGGTATGCCTCTAGGAA 168968 |||| ||| | | |||||| | ||||| || ||| |||||||||||||||||||||| Sbjct 3918 CAGTTTTCTTGATCTACCCAATCGGTCAAGGAAGTTTTTCTGATGGTATGCCTCTAGGAA 3977 Query 168969 TTTCTGGAACATTCAACTTCATGTTCGTATTCCAAGCAGAGCACAACATTCTTATGCATC 169028 | ||||| || ||||| |||||| | |||||||| || ||||||||||| |||||||| | Sbjct 3978 TCTCTGGTACTTTCAATTTCATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACC 4037 Query 169029 CCTTCCATATGGCAGGAGTAGCAGGTATGTTCGGTGGATCTCTATTCTCCGCAATGCATG 169088 | || || ||| ||| || || ||| | ||||| || || |||||| || ||||||| Sbjct 4038 CATTTCACATGTTAGGCGTGGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATG 4097 Query 169089 GTTCACTTGTAACATCTTCTCTAATCAGAGAGACTACTGAGGAAGAATCTCAGAACTATG 169148 |||| | ||||| ||| | | ||||| || || || || | |||||| || | | Sbjct 4098 GTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAG 4157 Query 169149 GTTACAAGTTCGGTCAAGAAGAAGAAACCTATAATATTGTTGCAGCACATGGATACTTCG 169208 |||||| ||||||||||| |||||||| |||||||| || || || ||||| || || | Sbjct 4158 GTTACAGATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCCGCTCATGGTTATTTTG 4217 Query 169209 GTAGATTAATCTTCCAGTATGCAAGTTTCAACAACTCAAGAAGTCTTCACTTCTTCCTAG 169268 | |||| |||||||| ||||| |||||||||||||| | | ||||||||||||| Sbjct 4218 GCCGATTGATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCGTTACACTTCTTCCTAG 4277 Query 169269 CAGTGTTCCCAGTTGTATGTGTATGGTTAACCTCTATGGGTATCTGTACAATGGCATTCA 169328 | | | || || ||| || | ||||| ||| || | ||||| | || ||||| |||| Sbjct 4278 CTGCTTGGCCTGTAGTAGGTATCTGGTTTACCGCTTTAGGTATTAGCACTATGGCTTTCA 4337 Query 169329 ACTTGAACGGATTTAACTTTAACCAATCAGTTGTAGATGTTAACGGTAAGATCATTCCTA 169388 || | || || || || || |||||||| || || || | | ||| | ||| | Sbjct 4338 ACCTAAATGGTTTCAATTTCAACCAATCTGTAGTTGACAGTCAGGGTCGTGTAATTAACA 4397 Query 169389 CATGGGGTGACGTACTTAACAGAGCAAACCTTGGTATGGAAGTAATGCATGAGCGTAACG 169448 | |||| ||| | | ||| | || ||||||||||||||||| |||||||| ||||| | Sbjct 4398 CTTGGGCTGATATCATCAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATG 4457 Query 169449 CTCACAACTTCCCACTAGACTTAGC 169473 |||| |||||||| |||||| |||| Sbjct 4458 CTCATAACTTCCCTCTAGACCTAGC 4482 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 564435694529760