Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20americanum_20[genbank_20GCA_5F900188915.1_202017-07-22] 837 sequences; 9,013,692 total letters Query= NC_015569.1 Length=178563 Score E Sequences producing significant alignments: (Bits) Value seq83 607 9e-169 >seq83 Length=41462 Score = 607 bits (672), Expect = 9e-169 Identities = 720/973 (74%), Gaps = 2/973 (0%) Strand=Plus/Minus Query 83985 GGGAAGTTATGTGCGTTACGTTCGTGCATCACTTCCATACCAAGCCCGGCACGATTAAGT 84044 ||||||||||| || |||||||| ||||| |||||||||||||| ||||| || | Sbjct 4470 GGGAAGTTATGAGCATTACGTTCATGCATAACTTCCATACCAAGGTTAGCACGGTTGATG 4411 Query 84045 ACATCGGCCCAGGTATTGACAACACGGTTTTGGCTATCGACAAGACTCTGATTGAAGTTA 84104 | ||| ||||| || || | ||||| || || || || | | || ||||| || Sbjct 4410 ATATCAGCCCAAGTGTTAATTACACGACCCTGACTGTCAACTACAGATTGGTTGAAATTG 4351 Query 84105 AATCCATTCAGATTAAATGCCATGGTGCTAACACCCAGAGCAGCAAACCAAATGCCAACC 84164 || ||||| || || || ||||| ||||||| ||| | ||| | |||||| || || || Sbjct 4350 AAACCATTTAGGTTGAAAGCCATAGTGCTAATACCTAAAGCGGTAAACCAGATACCTACT 4291 Query 84165 ACTGGCCAAGCAGCCAAGAAAAAGTGGAGAGAACGACTATTGTTGAAGGAAGCATACTGG 84224 || ||||||||||| | ||| ||||| | |||||| |||||||| |||||| ||| Sbjct 4290 ACAGGCCAAGCAGCTAGGAAGAAGTGTAACGAACGAGAGTTGTTGAAACTAGCATATTGG 4231 Query 84225 AAGATAAGACGACCGAAGTAGCCGTGAGCAGCAACAATATTATAAGTTTCCTCTTCTTGA 84284 ||||| | || || || || || ||||| || || |||||||||||||| || |||||| Sbjct 4230 AAGATCAATCGGCCAAAATAACCATGAGCGGCTACGATATTATAAGTTTCTTCCTCTTGA 4171 Query 84285 CCGAACTTGTAACCATAGTTTTGTGAGACATTTTCTGTAGTTTCTCGGATTAGAGAAGAA 84344 ||||| ||||||| | || || |||||||||| ||||| | ||| | | |||| Sbjct 4170 CCGAATCTGTAACCTTCATTAGCAGATTCATTTTCTGTGGTTTCCCTGATCAAACTAGAA 4111 Query 84345 GTGACAAGTGAACCATGCATTGCAGAGAATAGAGCTCCACCGAATACACCAGCAACTCCC 84404 || || | ||||||||||| ||| |||||| | || |||||||||||||| || || Sbjct 4110 GTTACCAAGGAACCATGCATAGCACTGAATAGGGAGCCGCCGAATACACCAGCCACGCCT 4051 Query 84405 AACATGTGAAAGGGATGCATAAGGATGTTATGTTCCGCCTGGAAGACAAGCATGTAGTTG 84464 ||||||||||| || |||||||||||||| || || |||||||| |||| |||| | ||| Sbjct 4050 AACATGTGAAATGGGTGCATAAGGATGTTGTGCTCAGCCTGGAATACAATCATGAAATTG 3991 Query 84465 AACGTTCCTGAGATACCAAGTGGCATGCCATCAGAGAAAGAACCTTGCCCGAAAGGATAC 84524 || || || ||||| || || ||||| |||||||| ||| ||||| |||| || || Sbjct 3990 AAAGTACCAGAGATTCCTAGAGGCATACCATCAGAAAAACTTCCTTGACCGATTGGGTAG 3931 Query 84525 ACAAGGAATACAGCAGATGCCGCTGCAACTGGAGCAGAGTAAGCAACACAGATCCATGGA 84584 | | ||| || || | || |||||||| ||||| || || |||||| ||||| || Sbjct 3930 ATCAAGAAAACTGCGGTAGCAGCTGCAACAGGAGCTGAATATGCAACAGCAATCCAAGGT 3871 Query 84585 CGCATACCGAGACGATATGAAAGTTCCCATTCACGACCCATGTAAGCAAATGCACCAATC 84644 |||||||| ||||| | ||| ||||| ||||||||||||||| | | | |||| Sbjct 3870 CGCATACCCAGACGGAAGCTAAGCTCCCACTCACGACCCATGTAACAAGCTACGCCAAGT 3811 Query 84645 AGGAAGTGAAAGACAACAAGTTGATAAGGTCCACCATTATATAGCCATTCGTCCATACTT 84704 | |||||| | |||| |||| |||||| ||||| || |||| |||||| || | | Sbjct 3810 AAGAAGTGTAGAACAATTAGTTCATAAGGACCACCGTTGTATAACCATTCATCAACGGAT 3751 Query 84705 GCTGCTTCCCAAATAGGATAGAAATGTAGACCAATAGCATTAGAGGATGGAACTACGGCA 84764 || |||||||| || || || ||||||| ||| ||||| ||| | |||| | |||| Sbjct 3750 GCCGCTTCCCAGATTGGGTAAAAATGTAAACCTATAGCTGCAGAAGTAGGAATAATGGCA 3691 Query 84765 CCAGAAATGATGTTGTTTCCGTACATGAGAGAACCAGCGACTGGCTCACGGATACCGTCA 84824 || ||||| || ||||||||||| | ||||| || | || || ||||| ||||| ||| Sbjct 3690 CCGGAAATAATATTGTTTCCGTAAAGTAGAGACCCTGAAACAGGTTCACGAATACCATCA 3631 Query 84825 ATATCAACTGGGGGTGCACCAACGAATGCAATGATGAA-ACAGACAGTGGCAGCAAGTAG 84883 || || ||||| || ||| ||| ||| ||||| || || ||||| ||| || | | || Sbjct 3630 ATGTCTACTGGAGGAGCAGCAATGAAGGCAATAATAAATACAGA-AGTTGCCGTCAATAA 3572 Query 84884 AGTTGGAATCATAAGAGTTCCAAACCAACCAACATAGATACGGTTGTTAGTGGAGGTGAC 84943 || || ||||| | | |||||||| |||| || | |||||| | |||| || | Sbjct 3571 GGTAGGGATCATCAAAACACCAAACCATCCAATGTAAAGACGGTTTTCAGTGCTAGTTAT 3512 Query 84944 CCAATCACAGAAG 84956 ||| | ||||||| Sbjct 3511 CCAGTTACAGAAG 3499 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571267623049960