Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20americanum_20[genbank_20GCA_5F900188915.1_202017-07-22] 837 sequences; 9,013,692 total letters Query= NC_019443.1 Length=172879 Score E Sequences producing significant alignments: (Bits) Value seq83 594 6e-165 >seq83 Length=41462 Score = 594 bits (658), Expect = 6e-165 Identities = 701/947 (74%), Gaps = 4/947 (0%) Strand=Plus/Plus Query 162541 GGTTGGTTCGGTGTCTTGATGATCCCTTGCTTGCTCGCAGCAGCAACTTGCTTCATCATT 162600 || ||||| ||||| |||||||||||| ||| | | ||| | || || || ||| Sbjct 3542 GGATGGTTTGGTGTTTTGATGATCCCTACCTTATTGACGGCAACTTCTGTATTTATTATT 3601 Query 162601 GCATTCATTGCAGCACCTCCAGTTGATATCGATGGTATCAGAGAACCTGTTGCAGGTTCA 162660 || |||||||| || |||||||| || || |||||||| | ||||||||| |||| || Sbjct 3602 GCCTTCATTGCTGCTCCTCCAGTAGACATTGATGGTATTCGTGAACCTGTTTCAGGGTCT 3661 Query 162661 CTTCTCTATGGTAACAACATCATCTCTGGTGCTGTCGTTCCTAGTTCAAATGCTATTGGT 162720 || || || || ||||| || || || ||||| | |||||| ||| ||||| ||| Sbjct 3662 CTACTTTACGGAAACAATATTATTTCCGGTGCCATTATTCCTACTTCTGCAGCTATAGGT 3721 Query 162721 CTTCACTTCTATCCTATCTGGGAAGCAGCAACTCTTGATGAGTGGTTGTATAATGGTGGA 162780 | || || || || ||||||||||| ||| | ||||||| ||||| || || ||||| Sbjct 3722 TTACATTTTTACCCAATCTGGGAAGCGGCATCCGTTGATGAATGGTTATACAACGGTGGT 3781 Query 162781 CCTTTCCAACTTGTAGTCTTCCACTTCCTTATCGGAATCACAGCATACTGTGGTCGTCAG 162840 |||| |||| | || | |||||| | | || | | ||| |||||| || Sbjct 3782 CCTTATGAACTAATTGTTCTACACTTCTTACTTGGCGTAGCTTGTTACATGGGTCGTGAG 3841 Query 162841 TGGGAACTTTCTTACCGCTTAGGTATGCGTCCTTGGATCTGTGTTGCATACTCTGCACCA 162900 ||||| ||| | ||| | |||||||| |||||||| ||||||||| || || || Sbjct 3842 TGGGAGCTTAGCTTCCGTCTGGGTATGCGACCTTGGATTGCTGTTGCATATTCAGCTCCT 3901 Query 162901 GTATCTGCAGCATTCGCTGTGTTCTTGGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGAC 162960 || | || || ||| || |||||| |||| || |||||||||| ||| ||||| Sbjct 3902 GTTGCAGCTGCTACCGCAGTTTTCTTGATCTACCCAATCGGTCAAGGAAGTTTTTCTGAT 3961 Query 162961 GCAATGCCTCTTGGTATTTCTGGTACTTTTAACTACATGTTCGTGTTCCAAGCAGAGCAC 163020 | |||||||| || || ||||||||||| || | |||| | || ||||| || |||||| Sbjct 3962 GGTATGCCTCTAGGAATCTCTGGTACTTTCAATTTCATGATTGTATTCCAGGCTGAGCAC 4021 Query 163021 AACATCCTAATGCACCCCTTCCATATGATTGGAGTCGCAGGTGTATTCGGTGGTTCACTC 163080 |||||||| |||||||| || || ||| | || || || ||||||||||| || || || Sbjct 4022 AACATCCTTATGCACCCATTTCACATGTTAGGCGTGGCTGGTGTATTCGGCGGCTCCCTA 4081 Query 163081 TTTAGTGCTATGCACGGTTCTCTTGTTACTTCTTCTCTTATCAGAGAAACTACTGAGCAA 163140 || ||||||||||| ||||| | || |||||| | | ||||| ||||| || || | Sbjct 4082 TTCAGTGCTATGCATGGTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAAT 4141 Query 163141 GAGTCACAGAACTACGGTTATAAGTTCGGACAAGAAGAAGAGACTTACAACATTGTTGCT 163200 || || || | ||||| | ||||| ||||| ||||| ||||| || || || || Sbjct 4142 GAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCC 4201 Query 163201 GCTCATGGATACTTTGGTCGCTTGATCTTCCAGTATGCATCTTTCAACAACTCACGTTCA 163260 |||||||| || ||||| || ||||||||||| ||||| |||||||||||| ||||| Sbjct 4202 GCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCG 4261 Query 163261 CTTCACTTCTTCCTTGCTGCATTCCCTGTGGTCTGCATCTGGTTCACTGCAATGGGTGTG 163320 | ||||||||||| ||||| | ||||| || | |||||||| || || | ||| | Sbjct 4262 TTACACTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATCTGGTTTACCGCTTTAGGTATT 4321 Query 163321 TCAACTATGGCATTCAACCTTAACGGTTTCAACTTCAACCAATCCGTCGTTGAC--GCAG 163378 |||||||| |||||||| || |||||||| ||||||||||| || |||||| ||| Sbjct 4322 AGCACTATGGCTTTCAACCTAAATGGTTTCAATTTCAACCAATCTGTAGTTGACAGTCAG 4381 Query 163379 GTGGTAAAGTGATTCCTACTTGGGCAGATATCCTTAACAGAGCAGGACTTGGTATGGAAG 163438 ||| || ||| |||||||| |||||| | ||| | || ||||||||||||| Sbjct 4382 --GGTCGTGTAATTAACACTTGGGCTGATATCATCAACCGTGCTAACCTTGGTATGGAAG 4439 Query 163439 TTATGCACGAGCGTAATGCTCACAACTTCCCACTTGACCTTGCTGCT 163485 ||||||| || ||||||||||| |||||||| || ||||| |||||| Sbjct 4440 TTATGCATGAACGTAATGCTCATAACTTCCCTCTAGACCTAGCTGCT 4486 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 553079013350280