Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20americanum_20[genbank_20GCA_5F900188915.1_202017-07-22] 837 sequences; 9,013,692 total letters Query= NC_020865.1 Length=45730 Score E Sequences producing significant alignments: (Bits) Value seq83 497 3e-136 >seq83 Length=41462 Score = 497 bits (550), Expect = 3e-136 Identities = 691/965 (72%), Gaps = 6/965 (1%) Strand=Plus/Plus Query 41255 ACTAATAACCGTCTTTATGTAGGATGGTTCGGAGTCCTTATGATTCCGTGCCTCCTTGCC 41314 ||| | ||||||||||| | |||||||| || || | ||||| || | ||| ||| | Sbjct 3521 ACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCC-TACCTTATTGAC 3579 Query 41315 GCTACAACTTGT---TTTATTATCGCCTTTGTTGGCGCACCACCTGTTGACATCGATGGA 41371 | |||||| | |||||||| ||||| ||| || || || || ||||| ||||| Sbjct 3580 GG--CAACTTCTGTATTTATTATTGCCTTCATTGCTGCTCCTCCAGTAGACATTGATGGT 3637 Query 41372 ATCCGAGAACCCGTCGCTGGCTCCCTGTTGTATGGTAACAACATCATATCAGGAGCCGTC 41431 || || ||||| || | || || || | || || ||||| || || || || ||| | Sbjct 3638 ATTCGTGAACCTGTTTCAGGGTCTCTACTTTACGGAAACAATATTATTTCCGGTGCCATT 3697 Query 41432 GTTCCGAGCAGTAATGCCATCGGACTACACTTCTACCCAATTTGGGAAGCTGCTACACTT 41491 |||| | | || || || |||| || |||||||| |||||||| || | || Sbjct 3698 ATTCCTACTTCTGCAGCTATAGGTTTACATTTTTACCCAATCTGGGAAGCGGCATCCGTT 3757 Query 41492 GATGAATGGCTGTACAACGGCGGTCCATTCCAACTCACCGTATTCCACTTCCTCATTGGC 41551 ||||||||| | |||||||| ||||| | |||| | || | |||||| | ||||| Sbjct 3758 GATGAATGGTTATACAACGGTGGTCCTTATGAACTAATTGTTCTACACTTCTTACTTGGC 3817 Query 41552 GTCTTTGCTTACATGGGACGAGAGTGGGAACTTAGCTATCGACTAGGGATGAGGCCCTGG 41611 || | ||||||||| || |||||||| ||||||| || || || ||| | || ||| Sbjct 3818 GTAGCTTGTTACATGGGTCGTGAGTGGGAGCTTAGCTTCCGTCTGGGTATGCGACCTTGG 3877 Query 41612 ATCTTTGTTGCGTACTCTGCTCCTGTCGCCGCTGCGACTGCTGTGTTCCTTGTTTATCCG 41671 || |||||| || || |||||||| || ||||| || || || ||| | | || || Sbjct 3878 ATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACCGCAGTTTTCTTGATCTACCCA 3937 Query 41672 TTTGGACAGGGCTCTTTTTCTGATGCTATGCCCTTGGGGATATCCGGCACCTTCAACTAC 41731 | || || || ||||||||||| |||||| | || || || || || ||||| | | Sbjct 3938 ATCGGTCAAGGAAGTTTTTCTGATGGTATGCCTCTAGGAATCTCTGGTACTTTCAATTTC 3997 Query 41732 ATGCTGGTGTTCCAGGCTGAGCACAATATTCTTATGCATCCTTTTCACATGCTGGGTGTG 41791 ||| | || ||||||||||||||||| || |||||||| || ||||||||| | || ||| Sbjct 3998 ATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTTCACATGTTAGGCGTG 4057 Query 41792 GCCGGCGTATTTGGTGGGAGTTTGTTCTCTGCTATGCACGGTAGCCTGGTCACGTCGTCA 41851 || || ||||| || || | ||| ||||||||| ||| | |||| || || Sbjct 4058 GCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACTTCTAGT 4117 Query 41852 CTCATTCGTGAGACGACTGAAGAGGTTTCACAGAACTATGGTTACAAGTTTGGTCAAGAG 41911 | || | || || || ||| | | || || | ||||||| || ||||||||| Sbjct 4118 TTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAG 4177 Query 41912 GAAGAGACTTACAATATTGTTGCTGCTCACGGCTATTTTGGTCGGCTTATCTTCCAATAT 41971 ||||| ||||| ||||| || || ||||| || |||||||| || | |||||||||||| Sbjct 4178 GAAGAAACTTATAATATCGTAGCCGCTCATGGTTATTTTGGCCGATTGATCTTCCAATAT 4237 Query 41972 GCTAGCTTTAATAATTCCCGTAGTCTTCATTTCTTTCTTGCTGCCTGGCCTGTTGTAGGT 42031 ||||| || || || || ||| | || ||||| || ||||| |||||||| |||||| Sbjct 4238 GCTAGTTTCAACAACTCTCGTTCGTTACACTTCTTCCTAGCTGCTTGGCCTGTAGTAGGT 4297 Query 42032 ATTTGGTTTGCTGCGCTTGGCGTGTCTACCATGGCTTTCAACTTGAATGGTTTCAACTTT 42091 || |||||| | || | || | || |||||||||||| | ||||||||||| || Sbjct 4298 ATCTGGTTTACCGCTTTAGGTATTAGCACTATGGCTTTCAACCTAAATGGTTTCAATTTC 4357 Query 42092 AACCAATCTCTGCTAGCTGCTGATGGACAGGTGATCAACACCTGGGCTGACATTCTTAAC 42151 ||||||||| | | | | | || | || || ||||| |||||||| || | ||| Sbjct 4358 AACCAATCTGTAGTTGACAGTCAGGGTCGTGTAATTAACACTTGGGCTGATATCATCAAC 4417 Query 42152 CGTGCCAACCTTGGCTTTGAGGTGATGCATGAGCGGAACGCACACAACTTCCCGCTTGAC 42211 ||||| |||||||| | || || |||||||| || || || || |||||||| || ||| Sbjct 4418 CGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAACTTCCCTCTAGAC 4477 Query 42212 CTTGC 42216 || || Sbjct 4478 CTAGC 4482 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146212946720248