Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20americanum_20[genbank_20GCA_5F900188915.1_202017-07-22] 837 sequences; 9,013,692 total letters Query= NC_025464.1 Length=44147 Score E Sequences producing significant alignments: (Bits) Value seq83 621 1e-173 >seq83 Length=41462 Score = 621 bits (688), Expect = 1e-173 Identities = 733/982 (75%), Gaps = 10/982 (1%) Strand=Plus/Plus Query 18724 TTTTGTGACTGGGTAACCAGTACAGATAACCGTCTTTATATCGGCTGGTTTGGAACACTG 18783 || ||| ||||| |||| || || || ||||||||||| || || |||||||| || Sbjct 3500 TTCTGTAACTGGATAACTAGCACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTG 3559 Query 18784 ATGATTCCGTGTCTCCTTG-CAGCTACTATTTGT-TTCATTATTGCCTTCATTGCTGCAC 18841 ||||| || | || ||| | || ||| | ||| || |||||||||||||||||||| | Sbjct 3560 ATGATCCC-TACCTTATTGACGGCAACT-TCTGTATTTATTATTGCCTTCATTGCTGCTC 3617 Query 18842 CTCCTGTAGACATTGATGGCATCCGCGAGCCTGTTGCAGGCAGTCTTCTTTATGGAAACA 18901 |||| |||||||||||||| || || || |||||| |||| ||| ||||| ||||||| Sbjct 3618 CTCCAGTAGACATTGATGGTATTCGTGAACCTGTTTCAGGGTCTCTACTTTACGGAAACA 3677 Query 18902 ACATCATATCGGGAGCCGTCGTTCCGAG--CAGCAATGCCATCGGACTACACTTCTACCC 18959 | || || || || ||| | |||| | | ||| || || || |||| || ||||| Sbjct 3678 ATATTATTTCCGGTGCCATTATTCCTACTTCTGCA--GCTATAGGTTTACATTTTTACCC 3735 Query 18960 AATTTGGGAAGCTAATTCACTTGATGAATGGCTCTACAACGGGGGACCGTTCCAACTTGT 19019 ||| |||||||| || ||||||||||| | |||||||| || || | |||| | Sbjct 3736 AATCTGGGAAGCGGCATCCGTTGATGAATGGTTATACAACGGTGGTCCTTATGAACTAAT 3795 Query 19020 GGTCTTCCACTTCCTCATTGGCGTCTATGCTTACATGGGACGCGAGTGGGAACTTAGCTA 19079 || | |||||| | ||||||| | ||||||||| || |||||||| ||||||| Sbjct 3796 TGTTCTACACTTCTTACTTGGCGTAGCTTGTTACATGGGTCGTGAGTGGGAGCTTAGCTT 3855 Query 19080 TCGACTAGGGATGCGCCCTTGGATTTGTGTTGCCTACTCAGCTCCTGTTGCCGCAGCCTC 19139 || || || ||||| ||||||||| |||||| || |||||||||||||| || || | Sbjct 3856 CCGTCTGGGTATGCGACCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTAC 3915 Query 19140 TGCGGTCTTCCTTGTCTATCCATTTGGTCAAGGTTCCTTTAGCGACGCTATGCCTTTGGG 19199 || || ||| | |||| ||| | |||||||| ||| || | ||||||| | || Sbjct 3916 CGCAGTTTTCTTGATCTACCCAATCGGTCAAGGAAGTTTTTCTGATGGTATGCCTCTAGG 3975 Query 19200 TATTAGTGGTACGTTCAACTACATGCTTGTATTCCAGGCTGAACATAACATCCTCATGCA 19259 || |||||| ||||| | |||| |||||||||||||||| || |||||||| ||||| Sbjct 3976 AATCTCTGGTACTTTCAATTTCATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCA 4035 Query 19260 CCCGTTCCACATGCTCGGTGTCGCTGGTGTGTTCGGCGGGTCACTATTTAGTGCGATGCA 19319 ||| || |||||| | || || |||||||| |||||||| || ||||| ||||| ||||| Sbjct 4036 CCCATTTCACATGTTAGGCGTGGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCA 4095 Query 19320 CGGTTCGCTTGTTACGTCCTCGCTTG-TGCGTGAAACTACTGAAGAGGTATCTCAGAACT 19378 ||||| |||| || | || | ||| | | ||||| || ||| | | |||| || Sbjct 4096 TGGTTC-CTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATG 4154 Query 19379 ATGGCTACAAGTTTGGGCAAGAAGAAGAGACTTATAACATTGTTGCTGCTCATGGGTATT 19438 | || |||| || || ||||| ||||| |||||||| || || || |||||||| |||| Sbjct 4155 AAGGTTACAGATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCCGCTCATGGTTATT 4214 Query 19439 TTGGTCGGCTTATTTTCCAGTACGCATCCTTCAACAATAGCCGTTCTCTACATTTCTTTT 19498 |||| || | || ||||| || || |||||||| ||||| |||| ||||| Sbjct 4215 TTGGCCGATTGATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCGTTACACTTCTTCC 4274 Query 19499 TGGCTGCTTGGCCTGTGGTTGGCATTTGGTTTGCCGCCCTTGGGGTAAGCACCATGGCAT 19558 | |||||||||||||| || || || |||||| |||| | || | ||||| ||||| | Sbjct 4275 TAGCTGCTTGGCCTGTAGTAGGTATCTGGTTTACCGCTTTAGGTATTAGCACTATGGCTT 4334 Query 19559 TCAACTTGAATGGCTTTAACTTTAACCAGTCCCTTCTTGACAACAATGGTCGTGTCATTG 19618 ||||| | ||||| || || || ||||| || | |||||| | |||||||| ||| Sbjct 4335 TCAACCTAAATGGTTTCAATTTCAACCAATCTGTAGTTGACAGTCAGGGTCGTGTAATTA 4394 Query 19619 ATACTTGGGCTGACATTCTCAATCGTGCTAACCTCGGCTTTGAGGTAATGCACGAACGTA 19678 | ||||||||||| || |||| ||||||||||| || | || || ||||| ||||||| Sbjct 4395 ACACTTGGGCTGATATCATCAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTA 4454 Query 19679 ATGCTCATAACTTCCCACTTGA 19700 |||||||||||||||| || || Sbjct 4455 ATGCTCATAACTTCCCTCTAGA 4476 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 141147397069146