Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20americanum_20[genbank_20GCA_5F900188915.1_202017-07-22] 837 sequences; 9,013,692 total letters Query= NC_026923.1 Length=179110 Score E Sequences producing significant alignments: (Bits) Value seq83 618 5e-172 seq309 592 2e-164 >seq83 Length=41462 Score = 618 bits (684), Expect = 5e-172 Identities = 734/990 (74%), Gaps = 4/990 (0%) Strand=Plus/Plus Query 157675 CTTCTGCGAGTGGGTAACCTCAACCAACAACCGTTTGTATGTTGGTTGGTTCGGTGTACT 157734 |||||| | ||| |||| || | |||||| | || |||| ||||| ||||| | Sbjct 3499 CTTCTGTAACTGGATAACTAGCACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTT 3558 Query 157735 GATGATTCCTACGTTGCTTGCTGCAACTATCTGT-TTCATCGTCGCCTTCGTCGCTGCTC 157793 |||||| ||||| || | | |||||| ||||| || || | |||||| | ||||||| Sbjct 3559 GATGATCCCTACCTTATTGACGGCAACT-TCTGTATTTATTATTGCCTTCATTGCTGCTC 3617 Query 157794 CCCCTGTGGACATTGACGGCATCCGCGAACCAGTTGCTGGTTCACTCATGTATGGTAACA 157853 | || || |||||||| || || || ||||| ||| | || || || | || || |||| Sbjct 3618 CTCCAGTAGACATTGATGGTATTCGTGAACCTGTTTCAGGGTCTCTACTTTACGGAAACA 3677 Query 157854 ACATCATCTCTGGTGCAGTTGTTCCTAGTTCAAACGCAATCGGTCTCCACTTCTACCCCA 157913 | || || || ||||| || |||||| ||| || || ||| | || || ||||| | Sbjct 3678 ATATTATTTCCGGTGCCATTATTCCTACTTCTGCAGCTATAGGTTTACATTTTTACCCAA 3737 Query 157914 TCTGGGAAGCAGCATCTCTTGACGAGTGGCTGTATAACGGTGGTCCTTTCCAACTTGTAG 157973 |||||||||| ||||| |||| || ||| | || ||||||||||||| |||| | | Sbjct 3738 TCTGGGAAGCGGCATCCGTTGATGAATGGTTATACAACGGTGGTCCTTATGAACTAATTG 3797 Query 157974 TATTCCACTTCCTGATCGGCATCTATGCCTATATGGGACGTGAGTGGGAACTCTCTTACC 158033 | | |||||| | | ||| | | || ||||| ||||||||||| || | || Sbjct 3798 TTCTACACTTCTTACTTGGCGTAGCTTGTTACATGGGTCGTGAGTGGGAGCTTAGCTTCC 3857 Query 158034 GTTTAGGTATGCGCCCATGGATCTGTGTAGCATATTCTGCTCCAGTCGCTGCAGCGAGTG 158093 || | |||||||| || ||||| ||| |||||||| ||||| || || || || | | Sbjct 3858 GTCTGGGTATGCGACCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACCG 3917 Query 158094 CAGTATTCCTAGTCTATCCTTTCGGTCAAGGTTCTTTCTCCGATGCTATGCCTCTTGGTA 158153 |||| ||| | |||| || |||||||||| ||| || |||| ||||||||| || | Sbjct 3918 CAGTTTTCTTGATCTACCCAATCGGTCAAGGAAGTTTTTCTGATGGTATGCCTCTAGGAA 3977 Query 158154 TCTCTGGTACTTTTAACTACATGCTTGTATTCCAAGCAGAACACAACATCCTTATGCACC 158213 ||||||||||||| || | |||| |||||||||| || || ||||||||||||||||||| Sbjct 3978 TCTCTGGTACTTTCAATTTCATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACC 4037 Query 158214 CGTTCCATATGCTCGGTGTTGCTGGGGTATTCGGTGGATCTCTTTTCTCTGCTATGCATG 158273 | || || ||| | || || ||||| |||||||| || || || ||| ||||||||||| Sbjct 4038 CATTTCACATGTTAGGCGTGGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATG 4097 Query 158274 GAAGTCTCGTTACTTCCTCACTCGTTC-GTGAAACGACTGAAACAGAGTCACAGAACTAC 158332 | | || |||| || | | || | ||||| || |||| || || || | Sbjct 4098 GTTCCTTGGTAACTT-CTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAA 4156 Query 158333 GGTTATAAGTTCGGTCAAGAAGAAGAGACCTACAACATCGTTGCAGCCCATGGCTACTTC 158392 ||||| | ||||||||||| ||||| || || || ||||| || || ||||| || || Sbjct 4157 GGTTACAGATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCCGCTCATGGTTATTTT 4216 Query 158393 GGTCGTTTGATCTTCCAATACGCTTCATTCAACAACTCCCGTTCCTTGCACTTCTTCCTT 158452 || || |||||||||||||| ||| ||||||||||| ||||| || ||||||||||| Sbjct 4217 GGCCGATTGATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCGTTACACTTCTTCCTA 4276 Query 158453 GCTGCATGGCCTGTTGTCGGCATCTGGTTCACCGCCCTTGGCGTGTCAACCATGGCATTC 158512 ||||| |||||||| || || |||||||| ||||| | || | || ||||| ||| Sbjct 4277 GCTGCTTGGCCTGTAGTAGGTATCTGGTTTACCGCTTTAGGTATTAGCACTATGGCTTTC 4336 Query 158513 AACCTGAACGGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTGAAC 158572 ||||| || |||||||| |||||||| || | |||| ||||||||||||| | ||| Sbjct 4337 AACCTAAATGGTTTCAATTTCAACCAATCTGTAGTTGACAGTCAGGGTCGTGTAATTAAC 4396 Query 158573 ACCTGGGCAGATGTACTGAACCGCGCTGGTCTTGGTATGGAAGTTATGCATGAGCGTAAC 158632 || ||||| ||| | | ||||| ||| ||||||||||||||||||||||| ||||| Sbjct 4397 ACTTGGGCTGATATCATCAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAAT 4456 Query 158633 GCACACAACTTCCCACTGGATCTTGCTGCT 158662 || || |||||||| || || || |||||| Sbjct 4457 GCTCATAACTTCCCTCTAGACCTAGCTGCT 4486 >seq309 Length=37764 Score = 592 bits (656), Expect = 2e-164 Identities = 746/1017 (73%), Gaps = 6/1017 (1%) Strand=Plus/Plus Query 159379 TTTGATGTCCTGGATGACTGGCTTAAACGAGATCGCTTTGTCTTTGTGGGTTGGTCTGGA 159438 |||||| | ||||||||||| | | || || || || ||||| || ||||| || Sbjct 23118 TTTGATATTATGGATGACTGGTTACGGAGGGACCGTTTCGTTTTTGTAGGCTGGTCCGGT 23177 Query 159439 CTCCTACTTCTTCCCACTGCTTATATGGCCATTGGCGGTTGGCTTACTGGCACGACTTTT 159498 || | || |||| ||| ||| | || | || |||||| | || || || || ||| Sbjct 23178 CTATTGCTCTTTCCTTGTGCCTATTTCGCTGTAGGGGGTTGGTTCACAGGTACAACCTTT 23237 Query 159499 ATCACGAGTTGGTACACCCACGGTCTTGCTAGTTCCTACCTTGAAGG-TGCTAATTTTCT 159557 | || ||||| ||||| || | || ||||| || | ||||| ||| ||||| | Sbjct 23238 GTAACTTCATGGTATACCCATGGATTGGCCAGTTCTTATTTGGAAGGCTGC-AATTTCTT 23296 Query 159558 CACGGCAGCTGTCTCAACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGGGG 159617 || || || || || || |||||| || | | | ||||| | | |||| ||||| Sbjct 23297 AACTGCCGCGGTTTCTACTCCTGCTAATAGTTTAGCACATTCGTTATTGTTACTATGGGG 23356 Query 159618 TCCTGAGTCTCAAGGCGACTTCCAACGCTGGTGCCAACTTGGAGGGATTTGGTCCTTTGT 159677 ||||| | ||||| || || || ||||| ||| | || || | ||| | ||||| Sbjct 23357 GCCTGAAGCACAAGGAGATTTTACTCGTTGGTGTCAATTGGGGGGTCTGTGGACTTTTGT 23416 Query 159678 TGCTCTCCACGGTGCATTCGCTCTCATAGG-TTTTATGCTACGGCAATTTGAAATTGCTC 159736 ||||||||| || || || | || ||||| ||||||| |||| ||||| || |||||| Sbjct 23417 TGCTCTCCATGGAGCTTTTGGCCTAATAGGNTTTTATGTTACGTCAATTCGAGCTTGCTC 23476 Query 159737 G-TCTAGTTGGTATCCGTCCTTACAATGCTATTGCGTTCTCTGGTCCTATTGCTGTTTTT 159795 | ||| ||| | | ||||| ||||| || || ||||||||||| |||||||||||| Sbjct 23477 GATCT-GTTCAATTGAGACCTTATAATGCAATCGCATTCTCTGGTCCAATTGCTGTTTTT 23535 Query 159796 GTCAGCGTATTCCTTATCTATCCACTGGGTCAGTCTTCATGGTTCTTTGCACCTAGTTTC 159855 || ||||| || || |||||||| ||||||||| |||||||||||||||||||| Sbjct 23536 GTTTCTGTATTTCTGATTTATCCACTAGGTCAGTCTGGTTGGTTCTTTGCACCTAGTTTT 23595 Query 159856 GGGGTAGCAGCAATCTTTAGATTCCTGTTGTTCCTTCAGGGTTTCCACAACTGGACCCTC 159915 || |||||||| || ||| ||||| | | || |||| || || || || |||||| | Sbjct 23596 GGTGTAGCAGCTATATTTCGATTCATCCTATTTTTTCAAGGGTTTCATAATTGGACCTTG 23655 Query 159916 AACCCCTTCCATATGATGGGAGTTGCTGGTATACTAGGTGGAGCACTGTTGTGTGCAATC 159975 |||||||| ||||||||||||||||| ||| || | || | || || | || || || Sbjct 23656 AACCCCTTTCATATGATGGGAGTTGCCGGTGTATTGGGCGCTGCTTTGCTATGCGCCATT 23715 Query 159976 CATGGTGCTACTGTAGAGAACACATTGTTTGAAGATGGAGAACAAGCAAACACATTTAAG 160035 ||||||||||| ||||| || || || |||||||| || || ||||| ||||| Sbjct 23716 CATGGTGCTACCGTAGAAAATACTTTATTTGAAGACGGTGATGGTGCAAATACATTCCGT 23775 Query 160036 GCGTTTGAGCCTACTCAAGAAGAAGAGACTTATTCTATGGTCACTGCAAACCGCTTCTGG 160095 || ||| | || ||||||| ||||| |||||||| |||||||| || |||||||| ||| Sbjct 23776 GCTTTTAACCCAACTCAAGCCGAAGAAACTTATTCAATGGTCACCGCTAACCGCTTTTGG 23835 Query 160096 TCGCAGATCTTCGGTGTTGCATTTTCTAACAAGCGGTGGCTTCATTTTTTCATGTTGTTT 160155 || || ||||| || ||||| ||||| || || || ||| | ||||| || ||||| ||| Sbjct 23836 TCCCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTT 23895 Query 160156 GTGCCTGTTATGGGTCTATGGACATCCTCTATTGGCATTATTGGTCTTGCTTTCAACCTT 160215 || || || | ||| |||||| || |||| | | ||||| ||| | ||||| Sbjct 23896 GTACCAGTAACCGGTTTATGGATGAGTGCTCTTGGAGTAGTCGGTCTAGCTCTGAACCTA 23955 Query 160216 CGTGCTTACGA-TTTCGTGAGTCAGGAGATTAGAGCAGCAGAAGATCCTGAATTTGAGAC 160274 ||||| || || || ||| |||||| ||| | ||||| |||||||||||||||||||| Sbjct 23956 CGTGCCTATGACTTNCGTTTCTCAGGAAATTCGCGCAGCGGAAGATCCTGAATTTGAGAC 24015 Query 160275 CTTCTACACCAAGAACATCCTATTGAATGAAGGACTTCGTGCTTGGATGGCACCTGCTGA 160334 ||||||||||| || || || || || ||||| |||| ||||||||||| || || Sbjct 24016 TTTCTACACCAAAAATATTCTCTTAAACGAAGGTATTCGCGCTTGGATGGCGGCTCAAGA 24075 Query 160335 TCAACCACATGAAAACTTTATCTTCCCTGAGGAAGTACTACCTAGAGGTAACGCACT 160391 ||| || ||||||||| |||| ||||||||||| || ||||| | || ||||| || Sbjct 24076 TCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGCTCT 24132 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 573018004736400