Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20arcanum_20[genbank_20GCA_5F000612985.1_202014-03-22] 46,594 sequences; 665,186,956 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq18621 102 2e-16 seq6849 102 2e-16 seq2511 102 2e-16 seq3843 100 6e-16 seq29041 98.7 2e-15 seq14323 98.7 2e-15 seq12977 98.7 2e-15 seq9557 98.7 2e-15 seq8430 98.7 2e-15 seq6165 98.7 2e-15 seq5246 98.7 2e-15 seq5171 98.7 2e-15 seq4177 98.7 2e-15 seq4173 98.7 2e-15 seq2263 98.7 2e-15 seq2257 98.7 2e-15 seq2032 98.7 2e-15 seq1186 98.7 2e-15 seq1076 98.7 2e-15 seq637 98.7 2e-15 seq477 98.7 2e-15 seq12879 95.1 3e-14 seq6604 95.1 3e-14 seq4927 95.1 3e-14 seq12578 91.5 3e-13 >seq18621 Length=41009 Score = 102 bits (112), Expect = 2e-16 Identities = 73/83 (88%), Gaps = 1/83 (1%) Strand=Plus/Plus Query 165700 TAAAACG-CTTGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCG 165758 |||||| || |||||||||||||||| |||||||||| || || |||| || ||||||| Sbjct 38671 TAAAACAACTAGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCG 38730 Query 165759 TGGGTTCGAGCCCCACGATGGGC 165781 ||||||||||||||||| ||||| Sbjct 38731 TGGGTTCGAGCCCCACGGTGGGC 38753 >seq6849 Length=34086 Score = 102 bits (112), Expect = 2e-16 Identities = 67/74 (91%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 165708 TTGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGA 165767 |||||||||||||||||| |||||||||| || || |||| || |||||||||||||||| Sbjct 5144 TTGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGA 5085 Query 165768 GCCCCACGATGGGC 165781 |||||||| ||||| Sbjct 5084 GCCCCACGGTGGGC 5071 >seq2511 Length=8684 Score = 102 bits (112), Expect = 2e-16 Identities = 67/74 (91%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 165708 TTGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGA 165767 |||||||||||||||||| |||||||||| || || |||| || |||||||||||||||| Sbjct 745 TTGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGA 686 Query 165768 GCCCCACGATGGGC 165781 |||||||| ||||| Sbjct 685 GCCCCACGGTGGGC 672 Score = 98.7 bits (108), Expect = 2e-15 Identities = 66/74 (89%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 165708 TTGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGA 165767 |||||||||||||||||| |||||||||| || || |||| || |||||||||||| ||| Sbjct 233 TTGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTCCGA 174 Query 165768 GCCCCACGATGGGC 165781 |||||||| ||||| Sbjct 173 GCCCCACGGTGGGC 160 >seq3843 Length=76121 Score = 100 bits (110), Expect = 6e-16 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 ||||||||||||||||| |||||||||| || || |||| || ||||||||||||||||| Sbjct 6034 TGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 6093 Query 165769 CCCCACGATGGGC 165781 ||||||| ||||| Sbjct 6094 CCCCACGGTGGGC 6106 >seq29041 Length=15208 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 6472 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 6413 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 6412 CCCACGGTGGGC 6401 >seq14323 Length=18452 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 5824 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 5883 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 5884 CCCACGGTGGGC 5895 >seq12977 Length=45992 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 10588 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 10647 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 10648 CCCACGGTGGGC 10659 >seq9557 Length=15255 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 12342 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 12401 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 12402 CCCACGGTGGGC 12413 >seq8430 Length=22271 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 12314 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 12255 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 12254 CCCACGGTGGGC 12243 >seq6165 Length=11170 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 5812 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 5871 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 5872 CCCACGGTGGGC 5883 >seq5246 Length=33001 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 10536 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 10477 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 10476 CCCACGGTGGGC 10465 >seq5171 Length=35448 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 7214 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 7155 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 7154 CCCACGGTGGGC 7143 >seq4177 Length=96264 Score = 98.7 bits (108), Expect = 2e-15 Identities = 162/234 (69%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 230390 TTACAGAAGCAGTTGAAAACGAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGCCTTA 230449 || |||| || || || | |||| ||||||| | ||||| ||| |||| ||| || Sbjct 67018 TTGCAGATGCTGTGGAGATAGAAAGGGAGTTCGTGTGTGATGCTCTTCCTTGTGCTCTGG 67077 Query 230450 TTGGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTTG 230509 | || ||||| | || | ||| | | ||||| || || ||||| ||| | | || | Sbjct 67078 TGGGAATGAATGGAGATTTGATGAGTAAATACATAGAGTTTGTAGCTGACAGATTGTTGG 67137 Query 230510 TTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCA 230569 ||| | ||||| || || ||||||| || |||| || |||| | |||||||| | Sbjct 67138 ATGCTTTGGGTTATGACAAGATGTACAATGCTCAGAATCCATTTGATTGGATGGAGCTGA 67197 Query 230570 TTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGA 230623 || | ||||||||||| || ||||| || ||| | || | || ||||||| Sbjct 67198 TTAGTTTACAAGGGAAGACTAATTTCTTTGAGAAGAGAGTTGGGGAGTATCAGA 67251 >seq4173 Length=32854 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 22916 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 22857 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 22856 CCCACGGTGGGC 22845 >seq2263 Length=25198 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 7331 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 7390 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 7391 CCCACGGTGGGC 7402 >seq2257 Length=18397 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 3069 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 3010 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 3009 CCCACGGTGGGC 2998 >seq2032 Length=53368 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 44932 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 44873 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 44872 CCCACGGTGGGC 44861 >seq1186 Length=62300 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 9559 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 9500 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 9499 CCCACGGTGGGC 9488 >seq1076 Length=43059 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 18118 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 18059 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 18058 CCCACGGTGGGC 18047 >seq637 Length=68294 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 640 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 581 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 580 CCCACGGTGGGC 569 >seq477 Length=17241 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 1584 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 1525 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 1524 CCCACGGTGGGC 1513 >seq12879 Length=40970 Score = 95.1 bits (104), Expect = 3e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||| | Sbjct 19803 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGATC 19862 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 19863 CCCACGGTGGGC 19874 >seq6604 Length=3516 Score = 95.1 bits (104), Expect = 3e-14 Identities = 66/75 (88%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 165707 CTTGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCG 165766 || |||||||||||||||| |||||||||| || || |||| || |||||||||| |||| Sbjct 1241 CTGGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGATTCG 1300 Query 165767 AGCCCCACGATGGGC 165781 ||||||||| ||||| Sbjct 1301 AGCCCCACGGTGGGC 1315 >seq4927 Length=36689 Score = 95.1 bits (104), Expect = 3e-14 Identities = 69/80 (86%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 165702 AAACGCTTGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGG 165761 |||| | |||||||||||||||| |||||||||| || || |||| || |||||||||| Sbjct 31176 AAACACAAGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGG 31117 Query 165762 GTTCGAGCCCCACGATGGGC 165781 |||| ||||||||| ||||| Sbjct 31116 GTTCAAGCCCCACGGTGGGC 31097 >seq12578 Length=46471 Score = 91.5 bits (100), Expect = 3e-13 Identities = 65/74 (88%), Gaps = 2/74 (3%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGT--TCGA 165767 |||||||||||||||| |||||||||| || || |||| || |||||||||||| |||| Sbjct 5375 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCTCGA 5316 Query 165768 GCCCCACGATGGGC 165781 |||||||| ||||| Sbjct 5315 GCCCCACGGTGGGC 5302 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057192494278220