Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20arcanum_20[genbank_20GCA_5F000612985.1_202014-03-22] 46,594 sequences; 665,186,956 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq4177 138 1e-27 >seq4177 Length=96264 Score = 138 bits (152), Expect = 1e-27 Identities = 377/561 (67%), Gaps = 15/561 (3%) Strand=Plus/Minus Query 16201 ACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAA 16260 |||||| || || || || | ||||||||||| || | || || || || ||||| Sbjct 66962 ACACGCAAAATCACAGTGCAAACCTTCGTCTCTTGAAATTAACTCATTTGAGAAGGTTAA 66903 Query 16261 CCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGAA-AAGA 16319 || |||||| || ||||| || ||||| ||||||| | || | | ||| |||| Sbjct 66902 TCCAGGCATTAACCCCCGTTTTTTCAACCAAAATATCGAA-CAGAAGCTTCCGCTGAAGA 66844 Query 16320 ATATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTTTATTAC 16379 | || || |||||| | |||||||| | || || |||||| | || || || | Sbjct 66843 AAATCCCTTCAACACAAGCAAAAGCCACCAAACGCTCCGCGAAAGTTTCAGACCCAT--C 66786 Query 16380 GAATCCATTTCTGTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCTATGGCCT 16439 || |||| | |||||| || || | || | |||| || || || || || Sbjct 66785 GA-TCCAACGAAGGGCCCATTTCGCCTTCTTTTCAACACAAGGGATTGTCTCAATTGCAC 66727 Query 16440 TAAACAATTT-CTCTTTTTCCTGAATATCGATTATATACGTATCAATCAGTAAACTGTAC 16498 |||||||| ||||||| | | | ||| | || |||| || | ||| ||||||||| Sbjct 66726 GGAACAATTTGCTCTTTT-CGTCAGAATCCTTGATGTACGACTCCAACAGCAAACTGTAC 66668 Query 16499 ATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAG-AAGCATCGAGCCTCCGC 16557 || || || || || ||||| ||||| || || || |||||| ||||| |||||||| || Sbjct 66667 ATCTCGGAATGGATATTCTCAATGGCGATTTGGAACCCATAGAAAGCA-CGAGCCTCGGC 66609 Query 16558 TATTTGTACTTC-CACGTAAAATCGTTCC-GCCAGGTTCTCATTCACGATACCGTCACTT 16615 | || || || | | || | |||| || |||||||| || || ||||| Sbjct 66608 AACCTGGACATCTTTCATGAA--CCTTCCAGCGAGGTTCTCTAAAACTATGCCGTCTGAG 66551 Query 16616 GCAGCAAAAAACGCCAATATGTGCTTAATGAAATATTTTTCGTCAGATGTAAGAATATGC 16675 || |||||||| || | | || | ||||||| |||| | ||||| || | | | Sbjct 66550 GCGGCAAAAAAGGCAAGAACATGAGTGATGAAATGCCTTTCACCGGATGTTAGGTTTTCC 66491 Query 16676 CAATCTTTTAAATCTTTGGATATATCCACTTCTTCTGGCGTCCA-AAAGCTAGCCACTGC 16734 || | ||| |||| | ||| ||||||||| |||||| |||| | |||| || Sbjct 66490 CAGTGACGAGTATCGGTGGAGAGATCGACTTCTTCTACCGTCCAGAAAGAT-GCCATGGC 66432 Query 16735 CTTTTTATACATTTTCCAAAT 16755 || || ||||| | |||||| Sbjct 66431 TTTCTTGTACATCTCCCAAAT 66411 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511116539468080