Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20arcanum_20[genbank_20GCA_5F000612985.1_202014-03-22] 46,594 sequences; 665,186,956 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq21138 109 6e-19 seq2718 107 2e-18 seq29 104 2e-17 seq8314 102 8e-17 seq30 100 3e-16 seq11273 98.7 1e-15 seq8313 98.7 1e-15 >seq21138 Length=28562 Score = 109 bits (120), Expect = 6e-19 Identities = 152/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 || ||||| || ||||| ||||| || ||||| || || |||||| | || || || | Sbjct 13223 AAGATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACGATCACCCTAGAGGTTGAGTCT 13164 Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806 |||||| | | | | |||| | || || | ||||| || || || ||| | ||| Sbjct 13163 TCCGACACCATCGACAATGTCAAAGCCAAGATCCAGGACAAGGAAGGGATTCCCCCAGAC 13104 Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866 ||||| || | || | ||| || || ||||| || || | || || || ||||||| Sbjct 13103 CAGCAGCGTTTGATTTTCGCCGGAAAGCAGCTTGAGGATGGTCGTACTCTTGCCGACTAC 13044 Query 40867 AACATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899 ||||||||||||||| |||| || ||||| ||| Sbjct 13043 AACATCCAGAAGGAGTCCACTCTCCATCTCGTG 13011 >seq2718 Length=65933 Score = 107 bits (118), Expect = 2e-18 Identities = 152/211 (72%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || || ||||| || || || ||| | || |||||| | | Sbjct 44290 ATGCAGATCTTCGTGAAGACTCTTACGGGTAAGACGATTACCCTTGAGGTCGAAAGCTCA 44349 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| |||||| || || | || || || ||||| ||| | ||||| Sbjct 44350 GACACCATTGACAACG-TCAAGGCTAAGATCCAGGATAAGGAAGGCATTCCCCCAGACCA 44408 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| | | |||| || || || ||| |||| || | |||||||| |||||||| Sbjct 44409 GCAGAGGTTGATCTTTGCAGGAAAGCAGTTGGAAGATGGCCGCACCCTAGCTGACTACAA 44468 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899 ||||||||||||| |||| || ||| | ||| Sbjct 44469 CATCCAGAAGGAGTCCACCCTCCATTTGGTG 44499 Score = 102 bits (112), Expect = 8e-17 Identities = 150/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || || || || || |||||||| | || || ||| | || Sbjct 44518 ATGCAGATCTTCGTTAAGACTCTTACCGGAAAGACCATCACTTTGGAGGTGGAAAGCTCC 44577 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| | |||| || || | || || || || |||||| | ||||| Sbjct 44578 GACACCATTGACAACG-TGAAGGCTAAGATCCAGGATAAGGAAGGGATCCCCCCAGACCA 44636 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| | | |||| ||| || || ||||| || || | ||||| || |||||||| Sbjct 44637 GCAGAGGTTGATCTTCGCTGGAAAGCAGCTTGAGGATGGCCGCACTCTGGCTGACTACAA 44696 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||||||||||||| | || || ||||| || Sbjct 44697 CATCCAGAAGGAGTCTACCCTCCATCTTGT 44726 Score = 102 bits (112), Expect = 8e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || ||||| || || || ||||| | || || ||| | || Sbjct 44746 ATGCAGATTTTTGTTAAGACCCTCACCGGAAAGACTATCACTTTGGAGGTGGAAAGCTCC 44805 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | | |||| || || | ||||| ||||| || ||| | |||||| Sbjct 44806 GACACCATTGATAATGTTAAGGCTAAGATCCAGGACAAGGAGGGAATTCCCCCAGACCAG 44865 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || | | |||| ||| || || ||||| || || | |||||||| |||||||||| Sbjct 44866 CAGAGGTTGATCTTCGCTGGTAAGCAGCTCGAGGATGGCCGCACCCTTGCCGACTACAAC 44925 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 |||||||||||| | || || || || || Sbjct 44926 ATCCAGAAGGAGTCGACCCTTCACCTTGT 44954 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || || || || |||||||||||| | || || || | || Sbjct 44974 ATGCAGATCTTTGTTAAGACTCTTACCGGGAAAACCATCACCCTGGAGGTTGAGAGCTCC 45033 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | |||||| || || | ||||| ||||| |||||| | |||||| Sbjct 45034 GACACCATTGACAATGTCAAGGCCAAGATCCAAGACAAGGAGGGTATCCCCCCAGACCAG 45093 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || | | || | || ||||| ||||| || || | ||||| | ||||| ||| Sbjct 45094 CAGAGGTTGATTTTTGCTGGCAAGCAGCTCGAGGATGGCCGCACTTTGGCGGACTATAAC 45153 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 ||||| |||||| | || ||||| | ||| | | ||||||| || Sbjct 45154 ATCCAAAAGGAGTCGACCCTGCACTTGGTGCTTAGGCTGAGGGGAGG 45200 Score = 89.7 bits (98), Expect = 5e-13 Identities = 148/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || ||||| ||||| || || || |||||| | || || ||| | Sbjct 44062 ATGCAGATCTTTGTGAAAACTCTCACCGGAAAGACTATCACCCTAGAGGTGGAAAGTTCT 44121 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | | | |||| | |||| || || | ||||| || || || ||| |||| || Sbjct 44122 GATACAATCGACAACGTT-AAGGCTAAGATCCAGGACAAGGAAGGGATTCCCCCGGATCA 44180 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 |||| | || |||| ||| || || ||| |||| |||| || || || || ||||| Sbjct 44181 GCAAAGGCTGATCTTCGCCGGAAAGCAGTTGGAGGACGGACGTACTCTAGCTGATTACAA 44240 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899 ||||||||||||| | || || ||| | ||| Sbjct 44241 CATCCAGAAGGAGTCTACCCTCCATTTGGTG 44271 >seq29 Length=28306 Score = 104 bits (114), Expect = 2e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 ||||||||| ||||| ||||| | || || || ||||||||| | || || ||| | | Sbjct 27941 AATGCAAATTTTCGTGAAAACTTTGACAGGAAAGACCATCACCCTTGAGGTTGAAAGCTC 28000 Query 40749 CGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | | | |||| || || | ||||| || ||||| ||| | ||||| Sbjct 28001 TGACACCATTGACAATGTTAAGGCTAAGATCCAAGACAAGGAAGGCATTCCCCCAGACCA 28060 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 |||| | | |||| |||||||| ||||| || |||| | ||||| || ||||| Sbjct 28061 GCAAAGGTTGATCTTTGCGGGCAAGCAGCTTGAGGACGGCAGGACCCTTGCTGATTACAA 28120 Query 40869 CATCCAGAAGGA 40880 |||||||||||| Sbjct 28121 CATCCAGAAGGA 28132 >seq8314 Length=67656 Score = 102 bits (112), Expect = 8e-17 Identities = 151/214 (71%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 40685 GAAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAG 40744 |||||||||| || || || || || || |||||||| || || ||| | || || || Sbjct 25764 GAAAAATGCAGATCTTTGTGAAGACCCTGACGGGCAAGACTATTACCTTGGAGGTAGAGT 25823 Query 40745 CCACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGG 40804 | | |||| | | | | | |||| || |||| ||||| || ||||| || | | Sbjct 25824 CATCAGACACCATTGACAATGTTAAGGCTAAGATTCAAGACAAGGAAGGCATTCCACCAG 25883 Query 40805 ACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACT 40864 ||||||| ||| | || | ||| || || ||||| || || | || || || |||| Sbjct 25884 ACCAGCAGCGATTGATTTTCGCCGGTAAGCAGCTCGAGGATGGCCGAACGCTAGCTGACT 25943 Query 40865 ACAACATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||||||||||||||||| |||| || || || || Sbjct 25944 ACAACATCCAGAAGGAGTCCACCCTCCACCTTGT 25977 >seq30 Length=32432 Score = 100 bits (110), Expect = 3e-16 Identities = 161/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 ||||||||| ||||| || || | || ||||| || || ||| | || || ||| | | Sbjct 213 AATGCAAATCTTCGTGAAGACCTTGACTGGCAAGACTATTACCCTTGAGGTGGAAAGCTC 272 Query 40749 CGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACC 40807 ||||| | | | |||| | |||| || |||| ||||||||||| ||||| | |||| Sbjct 273 CGACACCATTGACAACG-TAAAGGCCAAGATTCAGGACAAAGAGGGTATCCCACCAGACC 331 Query 40808 AGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 40867 ||||| | | || | || ||||| ||| |||| || | | || | ||| |||| Sbjct 332 AGCAAAGGTTGATTTTTGCTGGCAAGCAGTTGGAAGATGGAAGGACATTAGCCGATTACA 391 Query 40868 ACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 | || |||||||| | || || ||||| |||||| | | ||||| || Sbjct 392 ATATTCAGAAGGAATCAACCCTTCATCTTGTGTTGAGGCTCAGGGGAGG 440 >seq11273 Length=79338 Score = 98.7 bits (108), Expect = 1e-15 Identities = 108/144 (75%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 40773 AAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAA 40832 ||| |||| ||||| ||||| || ||| | ||||| || || | |||| || || || Sbjct 32275 AAAGATTCAAGACAAGGAGGGTATTCCCCCAGACCAACAGCGTTTGATCTTTGCTGGTAA 32334 Query 40833 ACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCA 40892 ||| || || |||| | | || || ||||||||||||||||||||| | || || || Sbjct 32335 ACAACTTGAGGACGGGAGGACTCTTGCAGACTACAACATCCAGAAGGAGTCAACTCTCCA 32394 Query 40893 TCTAGTGTTGCGCTTGAGGGGCGG 40916 ||| |||||||| ||||| || || Sbjct 32395 TCTGGTGTTGCGTTTGAGAGGAGG 32418 Score = 93.3 bits (102), Expect = 4e-14 Identities = 107/144 (74%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 40773 AAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAA 40832 ||| |||| ||||| ||||| || ||| | ||||| || || | |||| || || || Sbjct 32503 AAAGATTCAAGACAAGGAGGGTATTCCCCCAGACCAACAGCGTTTGATCTTTGCTGGTAA 32562 Query 40833 ACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCA 40892 ||| || || || | | | || || ||||||||||||||||||||| | || || || Sbjct 32563 ACAACTTGAGGATGGGAGGACTCTTGCAGACTACAACATCCAGAAGGAGTCAACTCTCCA 32622 Query 40893 TCTAGTGTTGCGCTTGAGGGGCGG 40916 ||| |||||||| ||||| || || Sbjct 32623 TCTGGTGTTGCGTTTGAGAGGAGG 32646 Score = 89.7 bits (98), Expect = 5e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| || || ||||| || || || || || || || | || ||||| | | Sbjct 31508 ATGCAAATCTTTGTTAAAACTCTGACCGGAAAGACTATAACTCTTGAGGTCGAGAGCTCA 31567 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | |||| | ||||||| ||||| || || || ||| | |||||| Sbjct 31568 GACACCATTGATAATGTCAAAGCTAAAATTCAAGACAAGGAAGGTATTCCCCCAGACCAG 31627 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || | || |||| || || |||||||| || || | || || || || |||||| Sbjct 31628 CAGAGGCTGATCTTTGCTGGGAAACAGCTTGAAGATGGCCGAACACTTGCTGATTACAAC 31687 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||||| |||||| |||| || || || || Sbjct 31688 ATCCAAAAGGAGTCCACCCTTCACCTTGT 31716 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| ||||| || || || ||||| || || |||||||| | || ||||| | Sbjct 31280 ATGCAGATATTTGTTAAGACACTCACCGGAAAGACCATCACTCTTGAGGTCGAGAGTTCT 31339 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | |||| | || |||| ||||| || ||||| || | || ||| Sbjct 31340 GACACCATTGATAATGTCAAAGCTAAGATTCAAGACAAGGAAGGCATTCCTCCAGATCAG 31399 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || |||| |||| || || |||||||| || || | || || || || |||||| Sbjct 31400 CAGAGACTGATCTTTGCTGGGAAACAGCTTGAAGATGGCCGAACACTTGCTGATTACAAC 31459 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||||| || ||| | || || ||||| || Sbjct 31460 ATCCAAAAAGAGTCTACCCTTCATCTTGT 31488 >seq8313 Length=21892 Score = 98.7 bits (108), Expect = 1e-15 Identities = 150/214 (70%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 40685 GAAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAG 40744 |||||||||| || || || || || || |||||||| || || ||| | || || || Sbjct 1547 GAAAAATGCAGATCTTTGTGAAGACCCTAACGGGCAAGACTATTACCTTAGAGGTAGAGT 1488 Query 40745 CCACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGG 40804 | | |||| | | | | | |||| || |||| ||||| || ||||| || | | Sbjct 1487 CATCGGACACCATTGACAATGTTAAGGCTAAGATTCAGGACAAGGAAGGCATTCCACCAG 1428 Query 40805 ACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACT 40864 ||||||| || | || | |||||| || ||||| || || | || || || |||| Sbjct 1427 ACCAGCAGCGGTTGATTTTCGCGGGAAAGCAGCTTGAGGATGGCCGAACGCTAGCTGACT 1368 Query 40865 ACAACATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 |||||||||||||||| |||| || || || || Sbjct 1367 ACAACATCCAGAAGGAATCCACCCTCCACCTTGT 1334 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 514919123457440