Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20arcanum_20[genbank_20GCA_5F000612985.1_202014-03-22] 46,594 sequences; 665,186,956 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq11273 111 1e-19 seq2718 105 4e-18 seq21138 95.1 8e-15 seq8313 95.1 8e-15 seq1518 95.1 8e-15 seq8314 93.3 3e-14 >seq11273 Length=79338 Score = 111 bits (122), Expect = 1e-19 Identities = 168/234 (72%), Gaps = 4/234 (2%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 ||||| || |||||||| || || || | |||| |||||||| ||||| ||||| | Sbjct 32874 CCGCCACGGAGCCTCAGGACAAGATGAAGAGTAGACTCTTTCTGGATGTTATAGTCTGCA 32815 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTC-GACGGG 34281 || ||| | || || | |||||| || || || ||||||| ||| || || | ||| Sbjct 32814 AGGGTGCGGCCATCCTCAAGCTGCTTACCAGCAAAGATGAGCCTCTGTTGATCTGGTGGG 32755 Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCGA 34340 | || |||||||| ||||||| ||||| | || | | || | ||| | || | Sbjct 32754 ATCCCT-TCCTTGTCCTGTATCTTT-GCTTTCACATTGTCAATAGTATCAGAGCTCTCCA 32697 Query 34341 CGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATCGCTC 34394 | |||| ||||| || || || || ||||| |||||||||||||||||| ||| Sbjct 32696 CCTCCAATGTGATTGTCTTCCCAGTCAGAGTCTTCACAAAGATCTGCATCCCTC 32643 >seq2718 Length=65933 Score = 105 bits (116), Expect = 4e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 34162 TCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGA 34221 ||| || | |||||| ||||||| ||| | || || || || ||||| ||||| | Sbjct 45201 TCCTCCCCTCAGCCTAAGCACCAAGTGCAGGGTCGACTCCTTTTGGATGTTATAGTCCGC 45142 Query 34222 CAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGG 34281 || ||| | || || | ||||||||| || ||||| | || ||||||||| ||| Sbjct 45141 CAAAGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAAATCAACCTCTGCTGGTCTGGGGG 45082 Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGAC 34341 | | ||||||||| ||||| ||| | || | | || | |||| || || Sbjct 45081 GATACCCTCCTTGTCTTGGATCTTGGCCTTGACATTGTCAATGGTGTCGGAGCTCTCAAC 45022 Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 |||| ||||||||||| ||||| ||||| || |||||||||||||| Sbjct 45021 CTCCAGGGTGATGGTTTTCCCGGTAAGAGTCTTAACAAAGATCTGCAT 44974 Score = 100 bits (110), Expect = 2e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 ||||||| || | ||| || ||||| |||||||| || | || ||| |||| Sbjct 44273 AGCACCAAATGGAGGGTAGACTCCTTCTGGATGTTGTAATCAGCTAGAGTACGTCCGTCC 44214 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 ||||||||||| || ||||| || |||| ||||| || ||| | | |||||||| Sbjct 44213 TCCAACTGCTTTCCGGCGAAGATCAGCCTTTGCTGATCCGGGGGAATCCCTTCCTTGTCC 44154 Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357 ||||| ||| | | | | || | ||| | ||| || || | ||||| || Sbjct 44153 TGGATCTTAGCCTTAACGTTGTCGATTGTATCAGAACTTTCCACCTCTAGGGTGATAGTC 44094 Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 || |||||||||||||||||||||||||||||| Sbjct 44093 TTTCCGGTGAGAGTTTTCACAAAGATCTGCATC 44061 Score = 89.7 bits (98), Expect = 3e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || ||||| | || || ||||| | || || ||||| ||||||||||||| Sbjct 44972 CCACCACGCAGACGAAGGACAAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCA 44913 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| | || || | |||||| || ||||| || | || ||||||||| ||| Sbjct 44912 AGGGTGCGGCCATCCTCGAGCTGCTTACCAGCGAAGATCAACCTCTGCTGGTCTGGGGGA 44853 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | | ||||||||| ||||| ||| | || | || | |||| ||| || Sbjct 44852 ATTCCCTCCTTGTCCTGGATCTTAGCCTTAACATTATCAATGGTGTCGGAGCTTTCCACC 44793 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 |||| ||||| || || |||||||| || || ||||| |||||||| Sbjct 44792 TCCAAAGTGATAGTCTTTCCGGTGAGGGTCTTAACAAAAATCTGCAT 44746 Score = 84.2 bits (92), Expect = 1e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 || ||||| ||||||||||| | ||| ||| | || || | |||||| || ||||| Sbjct 44708 TCCTTCTGGATGTTGTAGTCAGCCAGAGTGCGGCCATCCTCAAGCTGCTTTCCAGCGAAG 44649 Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318 || | || ||||||||| ||| | | ||||| || ||||| ||| | | | Sbjct 44648 ATCAACCTCTGCTGGTCTGGGGGGATCCCTTCCTTATCCTGGATCTTAGCCTTCACGTTG 44589 Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378 | || | |||| ||| || |||| |||||||| || ||||| ||||| || || Sbjct 44588 TCAATGGTGTCGGAGCTTTCCACCTCCAAAGTGATGGTCTTTCCGGTAAGAGTCTTAACG 44529 Query 34379 AAGATCTGCAT 34389 ||||||||||| Sbjct 44528 AAGATCTGCAT 44518 >seq21138 Length=28562 Score = 95.1 bits (104), Expect = 8e-15 Identities = 151/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 ||||| || || | ||| || ||||| ||||||||||||| || ||| | || Sbjct 13009 AGCACGAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGCAAGAGTACGACCATCC 13068 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 || | |||||| || |||||||| | ||||||||||| ||| | | |||||||| Sbjct 13069 TCAAGCTGCTTTCCGGCGAAAATCAAACGCTGCTGGTCTGGGGGAATCCCTTCCTTGTCC 13128 Query 34298 GCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGT 34356 ||| || ||||| | || | | || | |||| || || || || | ||||| || Sbjct 13129 TGGATC-TTGGCTTTGACATTGTCGATGGTGTCGGAAGACTCAACCTCTAGGGTGATCGT 13187 Query 34357 TTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 || || || || |||||||| |||||||||||| Sbjct 13188 CTTCCCCGTTAGGGTTTTCACGAAGATCTGCATC 13221 >seq8313 Length=21892 Score = 95.1 bits (104), Expect = 8e-15 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 34198 TTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAA 34257 ||| ||||| ||||||||||| | ||| ||| | || || | |||||| || ||||| Sbjct 1351 TTCCTTCTGGATGTTGTAGTCAGCTAGCGTTCGGCCATCCTCAAGCTGCTTTCCCGCGAA 1410 Query 34258 AATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATC 34317 ||| | |||||||||||| || | || |||||||| ||||| ||| | || Sbjct 1411 AATCAACCGCTGCTGGTCTGGTGGAATGCCTTCCTTGTCCTGAATCTTAGCCTTAACATT 1470 Query 34318 GGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCAC 34377 | | || | || | || || || || | || || || ||||| || || || ||||| Sbjct 1471 GTCAATGGTGTCCGATGACTCTACCTCTAAGGTAATAGTCTTGCCCGTTAGGGTCTTCAC 1530 Query 34378 AAAGATCTGCAT 34389 |||||||||||| Sbjct 1531 AAAGATCTGCAT 1542 >seq1518 Length=20725 Score = 95.1 bits (104), Expect = 8e-15 Identities = 137/191 (72%), Gaps = 2/191 (1%) Strand=Plus/Minus Query 34200 CTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAA 34259 ||||||| |||||||| || | || ||| | || || | |||||| || ||||| | Sbjct 13844 CTTTCTGAATGTTGTAATCAGCTAGAGTACGTCCATCTTCGAGCTGCTTTCCGGCGAAGA 13785 Query 34260 TGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTT-AGATCG 34318 | | ||||||||||| || | | |||||||| ||||| ||||| | || | Sbjct 13784 TCAATCGCTGCTGGTCTGGTGGAATACCTTCCTTGTCTTGAATCTTA-GCTTTGACATTG 13726 Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378 | || | ||| ||||||| || || | |||||| || || || || ||||||||||| Sbjct 13725 TCAATAGTGTCGCTCGATTCAACTTCAAGCGTGATCGTCTTCCCCGTAAGAGTTTTCACG 13666 Query 34379 AAGATCTGCAT 34389 ||||||||||| Sbjct 13665 AAGATCTGCAT 13655 >seq8314 Length=67656 Score = 93.3 bits (102), Expect = 3e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 || ||||| ||||||||||| | ||| ||| | || || | |||||| || |||||| Sbjct 25959 TCCTTCTGGATGTTGTAGTCAGCTAGCGTTCGGCCATCCTCGAGCTGCTTACCGGCGAAA 25900 Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318 || | ||||||||||| || | || |||||||| ||||| ||| | || | Sbjct 25899 ATCAATCGCTGCTGGTCTGGTGGAATGCCTTCCTTGTCTTGAATCTTAGCCTTAACATTG 25840 Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378 | || | || | || || || |||| || || || ||||| || || || |||||| Sbjct 25839 TCAATGGTGTCTGATGACTCTACCTCCAAGGTAATAGTCTTGCCCGTCAGGGTCTTCACA 25780 Query 34379 AAGATCTGCAT 34389 ||||||||||| Sbjct 25779 AAGATCTGCAT 25769 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 322888538920640