Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20arcanum_20[genbank_20GCA_5F000612985.1_202014-03-22] 46,594 sequences; 665,186,956 total letters Query= NC_002642.1 Length=144575 Score E Sequences producing significant alignments: (Bits) Value seq4177 150 2e-31 >seq4177 Length=96264 Score = 150 bits (166), Expect = 2e-31 Identities = 563/872 (65%), Gaps = 27/872 (3%) Strand=Plus/Minus Query 15929 GACATAACTGACATTTTTTGATATTCACTAACTCTCTTTTCAAAGAAATTTGTTTTTCCT 15988 ||||||||||| ||| ||||| || | ||||||||| ||||||||||| || || ||| Sbjct 67267 GACATAACTGAGGCTTTCTGATACTCCCCAACTCTCTTCTCAAAGAAATTAGTCTTCCCT 67208 Query 15989 TCTAATGAAATATTTTCCATAAAATCAAAAGGATTTTTTGAACAATAGTATTTATCG-CA 16047 | ||| ||| ||||| ||||||| ||||| | || || | ||| | | | || Sbjct 67207 TGTAAACTAATCAGCTCCATCCAATCAAATGGATTCT--GAGCATT-GTACATCTTGTCA 67151 Query 16048 T--CCCAATTCCAACAATAATCTATCCGCCACAAATTCTATATACTGTTTCATTAAATCA 16105 | ||||| | ||| ||||| || || ||||| ||||| || | |||| ||||| Sbjct 67150 TAACCCAAAGCATCCAACAATCTGTCAGCTACAAACTCTATGTATTTACTCATCAAATCT 67091 Query 16106 CAGTTCATTCCTATTAATTTAACAGGGATTGCTTCTGTTAAAAAAtttttttCTATATTA 16165 | |||||||| | | | ||| | || || | || | ||||||| | Sbjct 67090 CCATTCATTCCCACCAGAGCACAAGGAAGAGCATCACACACGAACTCCCTTTCTATCTCC 67031 Query 16166 ACCGCTTCAATGATTATATCTCTTACTACACT----ATTTAACGGAGGGTTTAATAAGTG 16221 || || || | || | || ||| | || | ||| | | |||| || Sbjct 67030 ACAGCATCTGCAACAATTCCCCTGACT-CGCTCCTCAGTTAGCTTCGTCCTTAACAAACT 66972 Query 16222 TTTAAACATTATACAAGCAAAATCACAATGCAATCCTTCGTCCCTACTTATTAACTCGTT 16281 | || || ||| ||||||||||| ||||| |||||||| || |||||||| || Sbjct 66971 GTAAAGCAA---ACACGCAAAATCACAGTGCAAACCTTCGTCTCTTGAAATTAACTCATT 66915 Query 16282 TGAAAATGTAAGACCTGGCATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATGA 16341 ||| || || | || ||||||| || |||||||| | ||||||||| | || || Sbjct 66914 TGAGAAGGTTAATCCAGGCATTAACCCCCGTTTTTTCAACCAAAATATCG----AACAGA 66859 Query 16342 A----CCAGAAAAGAATATACCTTCAACTGCGGCAAATGCAACCAATCGCTCACCGTACG 16397 | || ||||| || |||||||| ||||| || ||||| ||||| || | | Sbjct 66858 AGCTTCCGCTGAAGAAAATCCCTTCAACACAAGCAAAAGCCACCAAACGCTCCGCGAAAG 66799 Query 16398 TTCTAtttttactttctatccattttttagcccaatttgctttttgtttAACACAGTTCA 16457 || | | || ||||| ||||| || || || | || |||||| | Sbjct 66798 TT---TCAGACCCATCGATCCAACGAAGGGCCCATTTCGCCTTCTTTTCAACACAAGGGA 66742 Query 16458 TGTTCTCTATTGCATTAAATAAATAAtttttttCTTTGCTATCTAAAATATAAGTATCTA 16517 | |||| |||||| || || | | ||||| | ||| || || | || | Sbjct 66741 TTGTCTCAATTGCACGGAACAATTTGCTCTTTTCGTCAGAATCCTTGATGTACGACTCCA 66682 Query 16518 TTAGTAAACTATACATTTCTGAATGAATATTCTCCATTGCTATCTGAAAACCATA-AAAG 16576 || ||||| ||||| || ||||| |||||||| || || || || || ||||| |||| Sbjct 66681 ACAGCAAACTGTACATCTCGGAATGGATATTCTCAATGGCGATTTGGAACCCATAGAAAG 66622 Query 16577 CATCTAGCTTCGGATATTTGTACTTCAGAGTAAAACCTTTCTGCTAAGTTTTCGTTAACT 16636 || | ||| |||| | || || || |||||| | || | ||| || |||| Sbjct 66621 CA-CGAGCCTCGGCAACCTGGACATCTTTCATGAACCTTCCAGCGAGGTTCTCTAAAACT 66563 Query 16637 ATTCCATCGCTAGCTGCAAAAAACGCAAGTATGTGTTTAATAAAAtttttttCGTTATCT 16696 || || || || |||||||| ||||| | || | || |||| |||| | Sbjct 66562 ATGCCGTCTGAGGCGGCAAAAAAGGCAAGAACATGAGTGATGAAATGCCTTTCACCGGAT 66503 Query 16697 GAAAGTTTTAACCAGTCAGAAAAATCTTTTGATAAATCGACCTCTTCTACAGTCCAAAAA 16756 | || ||| ||||| | | ||| | || | |||||| |||||||| ||||| ||| Sbjct 66502 GTTAGGTTTTCCCAGTGACGAGTATCGGTGGAGAGATCGACTTCTTCTACCGTCCAGAAA 66443 Query 16757 GAAGCAACAGCCTTTTTATACATTTTCCATAT 16788 || || | || || || ||||| | ||| || Sbjct 66442 GATGCCATGGCTTTCTTGTACATCTCCCAAAT 66411 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462242621448400