Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20arcanum_20[genbank_20GCA_5F000612985.1_202014-03-22] 46,594 sequences; 665,186,956 total letters Query= NC_005137.2 Length=131160 Score E Sequences producing significant alignments: (Bits) Value seq8951 93.3 4e-14 >seq8951 Length=56096 Score = 93.3 bits (102), Expect = 4e-14 Identities = 109/146 (75%), Gaps = 1/146 (1%) Strand=Plus/Minus Query 19971 TTTATCATT-TTCCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATG 20029 || ||||| ||||||| | | ||||| || | || || || |||||||| || ||| Sbjct 33932 TTGATCATGGTTCCTCCCCTGAGCCTCAGAACAAGGTGAAGAGTTGATTCTTTCTGAATG 33873 Query 20030 TTGTAATCGCCCATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGT 20089 |||||||| ||| ||| || ||||||||||||||| || ||| |||| || ||||| Sbjct 33872 TTGTAATCAGCCAGGGTTCTACCATCTTCCAATTGTTTTCCAGCAAAAATCAGTCTCTGC 33813 Query 20090 TGATCGACGGGCACGCCTTCTTTGTC 20115 ||||| || | ||||||||| || Sbjct 33812 TGATCCGGAGGTATGCCTTCTTTATC 33787 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419348931376914