Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20arcanum_20[genbank_20GCA_5F000612985.1_202014-03-22] 46,594 sequences; 665,186,956 total letters Query= NC_005906.1 Length=81755 Score E Sequences producing significant alignments: (Bits) Value seq4772 127 1e-24 seq37431 123 1e-23 seq31736 123 1e-23 seq3121 120 2e-22 seq9525 118 6e-22 seq15743 116 2e-21 seq11784 116 2e-21 seq5503 116 2e-21 seq4744 116 2e-21 seq344 116 2e-21 seq31480 114 7e-21 seq30259 114 7e-21 seq29792 114 7e-21 seq27848 114 7e-21 seq23631 114 7e-21 seq2616 113 2e-20 seq29446 111 8e-20 seq28700 111 8e-20 seq17311 111 8e-20 seq9329 111 8e-20 seq30277 109 3e-19 seq18845 109 3e-19 seq6339 109 3e-19 seq444 109 3e-19 seq30653 105 3e-18 seq5401 104 1e-17 seq9972 95.1 6e-15 >seq4772 Length=90701 Score = 127 bits (140), Expect = 1e-24 Identities = 90/103 (87%), Gaps = 2/103 (2%) Strand=Plus/Plus Query 11429 AAATATAGAA--TTAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTT 11486 ||||||| || ||| ||||||| ||| ||||||||| | | |||||||| ||||||| Sbjct 17723 AAATATAAAACGTTATAAAAAAATAAAACTGGCCCATGCAGGTCTCGAACCTGCGACCTT 17782 Query 11487 CGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||||||||||||||||| |||||||||||||||||||| Sbjct 17783 CGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAATGGGCC 17825 >seq37431 Length=9374 Score = 123 bits (136), Expect = 1e-23 Identities = 89/102 (87%), Gaps = 1/102 (1%) Strand=Plus/Minus Query 11441 AATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCAC 11500 || |||||| ||||||||||||| | | |||||||| ||||||||||||||||||||| Sbjct 8274 AAAAAAAAAAAAAATTGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCAC 8215 Query 11501 GACGCTCTRACCAACTGAGCTAATGGGCCGTCGACGA-TTGT 11541 |||||||| |||||||||||||||||||| | || || |||| Sbjct 8214 GACGCTCTAACCAACTGAGCTAATGGGCCATTGATGACTTGT 8173 >seq31736 Length=17093 Score = 123 bits (136), Expect = 1e-23 Identities = 84/94 (89%), Gaps = 2/94 (2%) Strand=Plus/Plus Query 11436 GAATTAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATT 11495 ||||||| |||||| || |||||||||| | | |||||||| |||||||||||||||| Sbjct 11958 GAATTAAGAAAAAA--AAGTTGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATT 12015 Query 11496 AGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 ||||||||||||| |||||||||||||||||||| Sbjct 12016 AGCACGACGCTCTAACCAACTGAGCTAATGGGCC 12049 >seq3121 Length=63630 Score = 120 bits (132), Expect = 2e-22 Identities = 80/90 (89%), Gaps = 0/90 (0%) Strand=Plus/Plus Query 11440 TAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCA 11499 ||| |||| || ||| ||||||||| | | |||||||| |||||||||||||||||||| Sbjct 2199 TAAAAAAATATAAAAATGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCA 2258 Query 11500 CGACGCTCTRACCAACTGAGCTAATGGGCC 11529 ||||||||| |||||||||||||||||||| Sbjct 2259 CGACGCTCTAACCAACTGAGCTAATGGGCC 2288 >seq9525 Length=8010 Score = 118 bits (130), Expect = 6e-22 Identities = 83/94 (88%), Gaps = 1/94 (1%) Strand=Plus/Plus Query 11437 AATTAATAAAAA-ATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATT 11495 ||| || ||||| || | ||||||||||| | | |||||||| |||||||||||||||| Sbjct 3418 AATCAAAAAAAATATTATATTGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATT 3477 Query 11496 AGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 ||||||||||||| |||||||||||||||||||| Sbjct 3478 AGCACGACGCTCTAACCAACTGAGCTAATGGGCC 3511 >seq15743 Length=6282 Score = 116 bits (128), Expect = 2e-21 Identities = 77/86 (90%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 11444 AAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGAC 11503 ||||||| || ||||||||| | | |||||||| |||||||||||||||||||||||| Sbjct 4058 AAAAAATAAAGATGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGAC 4117 Query 11504 GCTCTRACCAACTGAGCTAATGGGCC 11529 ||||| |||||||||||||||||||| Sbjct 4118 GCTCTAACCAACTGAGCTAATGGGCC 4143 >seq11784 Length=26130 Score = 116 bits (128), Expect = 2e-21 Identities = 90/107 (84%), Gaps = 7/107 (7%) Strand=Plus/Plus Query 11444 AAAAAATCAAA----TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCA 11499 ||||||| ||| |||||||||| | | |||||||| |||||||||||||||||||| Sbjct 15124 AAAAAATTAAAACTTTTGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCA 15183 Query 11500 CGACGCTCTRACCAACTGAGCTAATGGGCCGTCGACGATTGTGATTT 11546 ||||||||| |||||||||||||||||||| | |||||||||| Sbjct 15184 CGACGCTCTAACCAACTGAGCTAATGGGCCAT---TTATTGTGATTT 15227 >seq5503 Length=23916 Score = 116 bits (128), Expect = 2e-21 Identities = 88/105 (84%), Gaps = 6/105 (6%) Strand=Plus/Minus Query 11425 AGGGAAATATAGAATTAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACC 11484 ||| ||| | | ||||||||||||| |||||||| | | |||||||| ||||| Sbjct 18601 AGGAAAAAAAGGCATTAATAAAAAAT------GGCCCATGCAGGTCTCGAACCTGCGACC 18548 Query 11485 TTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||||||||||||||||||| |||||||||||||||||||| Sbjct 18547 TTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAATGGGCC 18503 >seq4744 Length=18384 Score = 116 bits (128), Expect = 2e-21 Identities = 86/101 (85%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 11429 AAATATAGAATTAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCG 11488 |||| |||| ||| | || ||||||||||||| | | |||||||| ||||||||| Sbjct 254 AAATGCAGAAATAAGATGTAAAAAAATTGGCCCATGCAGGTCTCGAACCTGCGACCTTCG 195 Query 11489 CGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||||||||||||||| |||||||||||||||||||| Sbjct 194 CGTTATTAGCACGACGCTCTAACCAACTGAGCTAATGGGCC 154 >seq344 Length=8352 Score = 116 bits (128), Expect = 2e-21 Identities = 79/89 (89%), Gaps = 3/89 (3%) Strand=Plus/Minus Query 11441 AATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCAC 11500 ||||||||| || ||||||||| | | |||||||| ||||||||||||||||||||| Sbjct 2792 AATAAAAAA---AACTGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCAC 2736 Query 11501 GACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||| |||||||||||||||||||| Sbjct 2735 GACGCTCTAACCAACTGAGCTAATGGGCC 2707 >seq31480 Length=19589 Score = 114 bits (126), Expect = 7e-21 Identities = 82/93 (88%), Gaps = 3/93 (3%) Strand=Plus/Minus Query 11437 AATTAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTA 11496 |||||| ||||||| || ||||||||| | | |||||||| ||||||||||||||||| Sbjct 14155 AATTAA-AAAAAATTAA--TGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTA 14099 Query 11497 GCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||| ||||||| |||||||||||||||||||| Sbjct 14098 GCACAACGCTCTAACCAACTGAGCTAATGGGCC 14066 >seq30259 Length=22418 Score = 114 bits (126), Expect = 7e-21 Identities = 79/89 (89%), Gaps = 2/89 (2%) Strand=Plus/Minus Query 11441 AATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCAC 11500 || ||||||| || ||||||||| | | |||||||| ||||||||||||||||||||| Sbjct 13779 AAAAAAAAATTAA--TGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCAC 13722 Query 11501 GACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||| |||||||||||||||||||| Sbjct 13721 GACGCTCTAACCAACTGAGCTAATGGGCC 13693 >seq29792 Length=23464 Score = 114 bits (126), Expect = 7e-21 Identities = 79/89 (89%), Gaps = 2/89 (2%) Strand=Plus/Minus Query 11441 AATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCAC 11500 || ||||||| | |||||||||| | | |||||||| ||||||||||||||||||||| Sbjct 12479 AAAAAAAAAT--ATTTGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCAC 12422 Query 11501 GACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||| |||||||||||||||||||| Sbjct 12421 GACGCTCTAACCAACTGAGCTAATGGGCC 12393 >seq27848 Length=5580 Score = 114 bits (126), Expect = 7e-21 Identities = 79/89 (89%), Gaps = 1/89 (1%) Strand=Plus/Plus Query 11442 ATAAAAAATCAA-ATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCAC 11500 |||||||| | ||||||||||| | | |||||||| ||||||||||||||||||||| Sbjct 3719 ATAAAAAAGTATTATTGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCAC 3778 Query 11501 GACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||| |||||||||||||||||||| Sbjct 3779 GACGCTCTAACCAACTGAGCTAATGGGCC 3807 >seq23631 Length=36210 Score = 114 bits (126), Expect = 7e-21 Identities = 80/91 (88%), Gaps = 2/91 (2%) Strand=Plus/Plus Query 11441 AATAAAAAATCAAA--TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGC 11498 || |||||| ||| |||||||||| | | |||||||| ||||||||||||||||||| Sbjct 30841 AAAAAAAAAAAAAAGTTTGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGC 30900 Query 11499 ACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||||| |||||||||||||||||||| Sbjct 30901 ACGACGCTCTAACCAACTGAGCTAATGGGCC 30931 >seq2616 Length=24881 Score = 113 bits (124), Expect = 2e-20 Identities = 84/98 (86%), Gaps = 1/98 (1%) Strand=Plus/Plus Query 11432 TATAGAATTAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGT 11491 |||| ||| || |||| || | ||||||||| | | |||||||| |||||||||||| Sbjct 13296 TATAAAATCAAACGAAAA-CAGAATGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGT 13354 Query 11492 TATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 ||||||||||||||||| |||||||||||||||||||| Sbjct 13355 TATTAGCACGACGCTCTAACCAACTGAGCTAATGGGCC 13392 >seq29446 Length=16820 Score = 111 bits (122), Expect = 8e-20 Identities = 69/75 (92%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 11455 TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAA 11514 |||||||||| | | |||||||| ||||||||||||||||||||||||||||| ||||| Sbjct 14969 TTGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAA 15028 Query 11515 CTGAGCTAATGGGCC 11529 ||||||||||||||| Sbjct 15029 CTGAGCTAATGGGCC 15043 >seq28700 Length=22152 Score = 111 bits (122), Expect = 8e-20 Identities = 75/85 (88%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 11445 AAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACG 11504 |||||| | | ||||||||| | | |||||||| ||||||||||||||||||||||||| Sbjct 12526 AAAAATAATAATGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACG 12467 Query 11505 CTCTRACCAACTGAGCTAATGGGCC 11529 |||| || ||||||||||||||||| Sbjct 12466 CTCTAACTAACTGAGCTAATGGGCC 12442 Score = 93.3 bits (102), Expect = 2e-14 Identities = 71/85 (84%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 11445 AAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACG 11504 |||||| | ||||||||| | | || ||||| | ||||||| ||||||||||| ||| Sbjct 15043 AAAAATAATTATGGCCCATGCAGGTCTCAAACCTGCAACCTTCGTGTTATTAGCACAACG 14984 Query 11505 CTCTRACCAACTGAGCTAATGGGCC 11529 |||| |||||||||||||||||||| Sbjct 14983 CTCTAACCAACTGAGCTAATGGGCC 14959 >seq17311 Length=25640 Score = 111 bits (122), Expect = 8e-20 Identities = 83/98 (85%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 11432 TATAGAATTAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGT 11491 |||| || || || |||| | ||||||||| | | |||||||| |||||||||||| Sbjct 13965 TATAAAAAAAACAAGAAATATTAGTGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGT 13906 Query 11492 TATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 ||||||||||||||||| |||||||||||||||||||| Sbjct 13905 TATTAGCACGACGCTCTAACCAACTGAGCTAATGGGCC 13868 >seq9329 Length=11899 Score = 111 bits (122), Expect = 8e-20 Identities = 76/86 (88%), Gaps = 3/86 (3%) Strand=Plus/Minus Query 11444 AAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGAC 11503 ||||||| | ||||||||| | | |||||||| |||||||||||||||||||||||| Sbjct 4545 AAAAAATTA---TGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGAC 4489 Query 11504 GCTCTRACCAACTGAGCTAATGGGCC 11529 ||||| |||||||||||||||||||| Sbjct 4488 GCTCTAACCAACTGAGCTAATGGGCC 4463 >seq30277 Length=9907 Score = 109 bits (120), Expect = 3e-19 Identities = 81/94 (86%), Gaps = 1/94 (1%) Strand=Plus/Plus Query 11437 AATTAATAAAAAATCAA-ATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATT 11495 ||| || ||| ||| | | ||||||||| | | |||||||| |||||||||||||||| Sbjct 6474 AATAAAAAAATAATTTATAATGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATT 6533 Query 11496 AGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 ||||||||||||| |||||||||||||||||||| Sbjct 6534 AGCACGACGCTCTAACCAACTGAGCTAATGGGCC 6567 >seq18845 Length=3769 Score = 109 bits (120), Expect = 3e-19 Identities = 72/79 (91%), Gaps = 1/79 (1%) Strand=Plus/Plus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 ||||||||| | | |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 1513 TGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 1572 Query 11516 TGAGCTAATGGGCC-GTCG 11533 |||||||||||||| |||| Sbjct 1573 TGAGCTAATGGGCCAGTCG 1591 >seq6339 Length=26418 Score = 109 bits (120), Expect = 3e-19 Identities = 68/74 (92%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 ||||||||| | | |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 4537 TGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 4596 Query 11516 TGAGCTAATGGGCC 11529 |||||||||||||| Sbjct 4597 TGAGCTAATGGGCC 4610 >seq444 Length=43416 Score = 109 bits (120), Expect = 3e-19 Identities = 68/74 (92%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 ||||||||| | | |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 25570 TGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 25629 Query 11516 TGAGCTAATGGGCC 11529 |||||||||||||| Sbjct 25630 TGAGCTAATGGGCC 25643 >seq30653 Length=2438 Score = 105 bits (116), Expect = 3e-18 Identities = 84/99 (85%), Gaps = 2/99 (2%) Strand=Plus/Minus Query 11431 ATATAGAATTAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCG 11490 ||||| || |||||| || ||| |||||||| | | |||||||| ||||||||||| Sbjct 2274 ATATACAAA-AATAAACAAAATAAT-GGCCCATGCAGGTCTCGAACCTGCGACCTTCGCG 2217 Query 11491 TTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||||||||||||| ||||||||||||||||| || Sbjct 2216 TTATTAGCACGACGCTCTAACCAACTGAGCTAATGGACC 2178 >seq5401 Length=23948 Score = 104 bits (114), Expect = 1e-17 Identities = 67/74 (91%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 ||||||||| | | |||||||| |||| |||||||||||||||||||||||| |||||| Sbjct 538 TGGCCCATGCAGGTCTCGAACCTGCGACTTTCGCGTTATTAGCACGACGCTCTAACCAAC 597 Query 11516 TGAGCTAATGGGCC 11529 |||||||||||||| Sbjct 598 TGAGCTAATGGGCC 611 >seq9972 Length=21131 Score = 95.1 bits (104), Expect = 6e-15 Identities = 56/59 (95%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 11471 TCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||| ||| ||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 14721 TCGAACCTGCGAACTTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAATGGGCC 14779 Lambda K H 0.638 0.409 0.919 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 261342708463144