Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20arcanum_20[genbank_20GCA_5F000612985.1_202014-03-22] 46,594 sequences; 665,186,956 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq4177 116 4e-21 >seq4177 Length=96264 Score = 116 bits (128), Expect = 4e-21 Identities = 301/453 (66%), Gaps = 12/453 (3%) Strand=Plus/Minus Query 21184 TTTTTGATAATCACTAACTCTTTTTTCGAAAAAATTTGTCTTTCCTTCCAATGATATAGA 21243 ||| ||||| || | |||||| || || || ||||| ||||| |||| || || Sbjct 67253 TTTCTGATACTCCCCAACTCTCTTCTCAAAGAAATTAGTCTTCCCTTGTAAACTAATCAG 67194 Query 21244 TTCCATAAAATCAAATGGATTTTCAGATTTAAATATTTTATTACAACCCAGTTCTGATAA 21303 ||||| ||||||||||||| | || || | || || | | |||||| | || Sbjct 67193 CTCCATCCAATCAAATGGATTCTGAGCATTGTACATCTTGTCATAACCCAAAGCATCCAA 67134 Query 21304 TAATCTATCTGCTACAAATTCTATATATTGACACATTAATTCACAATTCATACCGATCAA 21363 ||||| || |||||||| ||||| |||| || ||| || || | |||||| || | || Sbjct 67133 CAATCTGTCAGCTACAAACTCTATGTATTTACTCATCAAATCTCCATTCATTCCCACCAG 67074 Query 21364 TTTTACAGGAAGAGCTTTTGTCAAAAAAGATTTTTCTATAGAGACGGCTTC---AACAAT 21420 ||||||||| | || || ||||||| || || || |||||| Sbjct 67073 AGCACAAGGAAGAGCATCACACACGAACTCCCTTTCTATCTCCACAGCATCTGCAACAAT 67014 Query 21421 TATATTTATTA--TCCTAGATGTACTAGGGGGATACAATAATTGTTTAAACATCAAACAT 21478 | | | | |||| | || | || | || ||| | | |||||| Sbjct 67013 TCCCCTGACTCGCTCCTCAGTTAGCTTCGTCCTTAACA-AACTGT----AAAGCAAACAC 66959 Query 21479 GCAAAATCACAATGCAAACCTTCATCCCTACTTATTAATTCATTAGAAAATGTTAAACCG 21538 ||||||||||| ||||||||||| || || ||||| ||||| || || ||||| || Sbjct 66958 GCAAAATCACAGTGCAAACCTTCGTCTCTTGAAATTAACTCATTTGAGAAGGTTAATCCA 66899 Query 21539 GGCATTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAATGC-TCCTGAAAAGAAAAT 21597 |||||||| || | ||||| ||||||||||| || || | || ||| |||||||| Sbjct 66898 GGCATTAACCCCCGTTTTTTCAACCAAAATATCGA-ACAGAAGCTTCCGCTGAAGAAAAT 66840 Query 21598 GCCCTCAACGGCAGCAAATGCAACTAATCGTTC 21630 || ||||| |||||| || || || || || Sbjct 66839 CCCTTCAACACAAGCAAAAGCCACCAAACGCTC 66807 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531591007676560